BLASTX nr result
ID: Coptis25_contig00006272
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006272 (307 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247... 93 2e-17 ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258... 91 1e-16 emb|CBI40561.3| unnamed protein product [Vitis vinifera] 91 1e-16 emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera] 91 1e-16 ref|XP_002516668.1| transcription factor, putative [Ricinus comm... 82 4e-14 >ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera] Length = 1876 Score = 93.2 bits (230), Expect = 2e-17 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 11/77 (14%) Frame = +2 Query: 35 LWSDNCNTSIFNFHRSFPNPNCSCDLCLTCCLELREGH*PGGNEVYSSQRRYAERAHGQ- 211 ++ DNCNTSI N HRS PNP+CS DLCLTCC ELR+G PGGNE SS +++ ER +GQ Sbjct: 1202 VYCDNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERVNGQG 1261 Query: 212 ----------DSRYGWQ 232 D RYGW+ Sbjct: 1262 TEVKGRIPAHDERYGWE 1278 >ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera] Length = 1035 Score = 90.5 bits (223), Expect = 1e-16 Identities = 39/59 (66%), Positives = 47/59 (79%) Frame = +2 Query: 35 LWSDNCNTSIFNFHRSFPNPNCSCDLCLTCCLELREGH*PGGNEVYSSQRRYAERAHGQ 211 L+ DNCNTSI +FHRS PNP+CS DLCL CC ELREG PGG+E +S +++ ERAHGQ Sbjct: 310 LYCDNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQ 368 >emb|CBI40561.3| unnamed protein product [Vitis vinifera] Length = 897 Score = 90.5 bits (223), Expect = 1e-16 Identities = 39/59 (66%), Positives = 47/59 (79%) Frame = +2 Query: 35 LWSDNCNTSIFNFHRSFPNPNCSCDLCLTCCLELREGH*PGGNEVYSSQRRYAERAHGQ 211 L+ DNCNTSI +FHRS PNP+CS DLCL CC ELREG PGG+E +S +++ ERAHGQ Sbjct: 286 LYCDNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQ 344 >emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera] Length = 1160 Score = 90.5 bits (223), Expect = 1e-16 Identities = 39/59 (66%), Positives = 47/59 (79%) Frame = +2 Query: 35 LWSDNCNTSIFNFHRSFPNPNCSCDLCLTCCLELREGH*PGGNEVYSSQRRYAERAHGQ 211 L+ DNCNTSI +FHRS PNP+CS DLCL CC ELREG PGG+E +S +++ ERAHGQ Sbjct: 310 LYCDNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQ 368 >ref|XP_002516668.1| transcription factor, putative [Ricinus communis] gi|223544163|gb|EEF45687.1| transcription factor, putative [Ricinus communis] Length = 939 Score = 82.0 bits (201), Expect = 4e-14 Identities = 36/61 (59%), Positives = 45/61 (73%) Frame = +2 Query: 35 LWSDNCNTSIFNFHRSFPNPNCSCDLCLTCCLELREGH*PGGNEVYSSQRRYAERAHGQD 214 L+ DNCNTSI NFHRS +P CS DLCLTCC E+R+G GGN+ SS ++ ER +GQD Sbjct: 289 LYCDNCNTSIVNFHRSCSDPGCSYDLCLTCCSEIRKGIQSGGNDAESSLHQFVERVNGQD 348 Query: 215 S 217 + Sbjct: 349 T 349