BLASTX nr result

ID: Coptis25_contig00006267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006267
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150417.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   188   3e-46
gb|ABA81853.1| NADH:ubiquinone oxidoreductase-like [Solanum tube...   188   3e-46
gb|AFW67472.1| hypothetical protein ZEAMMB73_507974 [Zea mays]        188   3e-46
ref|NP_001236536.1| uncharacterized protein LOC100499826 [Glycin...   188   3e-46
ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, put...   188   3e-46

>ref|XP_004150417.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial-like isoform 1 [Cucumis sativus]
           gi|449525518|ref|XP_004169764.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 221

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/102 (88%), Positives = 91/102 (89%)
 Frame = -2

Query: 313 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 134
           ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG
Sbjct: 120 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 179

Query: 133 PNFEFATETHXXXXXXXXXXXENGDRWETEIAENLRAESLYR 8
           PNFEFATETH           ENGDRWETEIAENLR+ESLYR
Sbjct: 180 PNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 221


>gb|ABA81853.1| NADH:ubiquinone oxidoreductase-like [Solanum tuberosum]
          Length = 229

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/102 (88%), Positives = 91/102 (89%)
 Frame = -2

Query: 313 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 134
           ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG
Sbjct: 128 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 187

Query: 133 PNFEFATETHXXXXXXXXXXXENGDRWETEIAENLRAESLYR 8
           PNFEFATETH           ENGDRWETEIAENLR+ESLYR
Sbjct: 188 PNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 229


>gb|AFW67472.1| hypothetical protein ZEAMMB73_507974 [Zea mays]
          Length = 223

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/102 (88%), Positives = 91/102 (89%)
 Frame = -2

Query: 313 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 134
           ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG
Sbjct: 122 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 181

Query: 133 PNFEFATETHXXXXXXXXXXXENGDRWETEIAENLRAESLYR 8
           PNFEFATETH           ENGDRWETEIAENLR+ESLYR
Sbjct: 182 PNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 223


>ref|NP_001236536.1| uncharacterized protein LOC100499826 [Glycine max]
           gi|255626927|gb|ACU13808.1| unknown [Glycine max]
          Length = 222

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/102 (88%), Positives = 91/102 (89%)
 Frame = -2

Query: 313 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 134
           ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG
Sbjct: 121 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 180

Query: 133 PNFEFATETHXXXXXXXXXXXENGDRWETEIAENLRAESLYR 8
           PNFEFATETH           ENGDRWETEIAENLR+ESLYR
Sbjct: 181 PNFEFATETHDELLYDKEKLLENGDRWETEIAENLRSESLYR 222


>ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus
           communis] gi|223549385|gb|EEF50873.1| NADH-ubiquinone
           oxidoreductase 1, chain, putative [Ricinus communis]
          Length = 222

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/102 (88%), Positives = 91/102 (89%)
 Frame = -2

Query: 313 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 134
           ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG
Sbjct: 121 ERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEG 180

Query: 133 PNFEFATETHXXXXXXXXXXXENGDRWETEIAENLRAESLYR 8
           PNFEFATETH           ENGDRWETEIAENLR+ESLYR
Sbjct: 181 PNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 222


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