BLASTX nr result
ID: Coptis25_contig00006262
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006262 (797 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ... 238 1e-60 ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2... 229 4e-58 ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA... 224 1e-56 ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g... 223 5e-56 emb|CBI35182.3| unnamed protein product [Vitis vinifera] 223 5e-56 >ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis] gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis] Length = 548 Score = 238 bits (606), Expect = 1e-60 Identities = 118/166 (71%), Positives = 136/166 (81%), Gaps = 4/166 (2%) Frame = +1 Query: 1 NPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVT 177 NPQYMP PRQ +NYYPP+DLP MEKQ HQG+S YGR+A MGVH S+N+Q +++TQ+T Sbjct: 368 NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQIT 427 Query: 178 QHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQ 357 Q MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI+G+ASQVQTAQQ Sbjct: 428 QQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 487 Query: 358 LIQNFMAEAASAQQKPANGPTD---NSYGSHGSVYSSPPSNTGRTG 486 LIQNFMAEA + Q G TD N Y +HGSVY+SPPSN G G Sbjct: 488 LIQNFMAEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAG 533 >ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa] Length = 392 Score = 229 bits (585), Expect = 4e-58 Identities = 115/165 (69%), Positives = 132/165 (80%), Gaps = 3/165 (1%) Frame = +1 Query: 1 NPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVT 177 NPQYMP PRQ DNYYPP+D+P MEKQ HQG+S YGR+A MG H+S+NAQ +++TQ+T Sbjct: 213 NPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQIT 272 Query: 178 QHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQ 357 Q MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPG MTVEI+G+ASQVQTAQQ Sbjct: 273 QQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQ 332 Query: 358 LIQNFMAEAASAQQKPANGPTDNSYG--SHGSVYSSPPSNTGRTG 486 LIQNFMAEA + Q G D Y SH SVY+SPPSN TG Sbjct: 333 LIQNFMAEAGAPAQPQTGGAADQGYNPYSHSSVYASPPSNPEHTG 377 >ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like [Glycine max] Length = 446 Score = 224 bits (572), Expect = 1e-56 Identities = 112/169 (66%), Positives = 136/169 (80%), Gaps = 9/169 (5%) Frame = +1 Query: 7 QYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVTQH 183 QYMP PRQ D+YYPP+++P +++Q HQG+S YGRDAS+GVH+S+N Q +++TQ+TQ Sbjct: 266 QYMPPPRQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQ 325 Query: 184 MQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQLI 363 MQIPLSYADAVIG AG++ISYIRR SGAT+TIQE RGVPGEMTVEI+G+ASQVQTAQQLI Sbjct: 326 MQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLI 385 Query: 364 QNFMAEAASAQQKPANGPTD--------NSYGSHGSVYSSPPSNTGRTG 486 QNFMAEAA+A PA T NSY +HGS+Y+SPPSN G G Sbjct: 386 QNFMAEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSLYASPPSNPGHAG 434 >ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max] Length = 443 Score = 223 bits (567), Expect = 5e-56 Identities = 112/169 (66%), Positives = 135/169 (79%), Gaps = 9/169 (5%) Frame = +1 Query: 7 QYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVTQH 183 QYMP PRQ D+YYP +++P +++Q HQG+S YGRDAS+GVH+S+N Q +++TQ+TQ Sbjct: 263 QYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQ 322 Query: 184 MQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQLI 363 MQIPLSYADAVIG AG++ISYIRR SGAT+TIQE RGVPGEMTVEI+G+ASQVQTAQQLI Sbjct: 323 MQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLI 382 Query: 364 QNFMAEAASAQQKPANGPTD--------NSYGSHGSVYSSPPSNTGRTG 486 QNFMAEAA+A PA T NSY +HGSVY+SPPSN G G Sbjct: 383 QNFMAEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSVYASPPSNPGHAG 431 >emb|CBI35182.3| unnamed protein product [Vitis vinifera] Length = 511 Score = 223 bits (567), Expect = 5e-56 Identities = 112/161 (69%), Positives = 131/161 (81%), Gaps = 4/161 (2%) Frame = +1 Query: 1 NPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVT 177 NP YMP PRQ D+YYPP +LP +EKQ HQG+S YGR+ MG H+ ++AQP +++TQVT Sbjct: 331 NPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVT 390 Query: 178 QHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQ 357 Q MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEING+ASQVQ AQQ Sbjct: 391 QQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQ 450 Query: 358 LIQNFMAEAASAQQKPANGPTD---NSYGSHGSVYSSPPSN 471 LIQNFMAEAA+ Q A G D NSY +HGS+Y+SP SN Sbjct: 451 LIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASN 491