BLASTX nr result

ID: Coptis25_contig00006262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006262
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   238   1e-60
ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|2...   229   4e-58
ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA...   224   1e-56
ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   223   5e-56
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              223   5e-56

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  238 bits (606), Expect = 1e-60
 Identities = 118/166 (71%), Positives = 136/166 (81%), Gaps = 4/166 (2%)
 Frame = +1

Query: 1   NPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVT 177
           NPQYMP PRQ +NYYPP+DLP  MEKQ HQG+S YGR+A MGVH S+N+Q   +++TQ+T
Sbjct: 368 NPQYMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQIT 427

Query: 178 QHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQ 357
           Q MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEI+G+ASQVQTAQQ
Sbjct: 428 QQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQ 487

Query: 358 LIQNFMAEAASAQQKPANGPTD---NSYGSHGSVYSSPPSNTGRTG 486
           LIQNFMAEA +  Q    G TD   N Y +HGSVY+SPPSN G  G
Sbjct: 488 LIQNFMAEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHAG 533


>ref|XP_002319087.1| predicted protein [Populus trichocarpa] gi|222857463|gb|EEE95010.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score =  229 bits (585), Expect = 4e-58
 Identities = 115/165 (69%), Positives = 132/165 (80%), Gaps = 3/165 (1%)
 Frame = +1

Query: 1   NPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVT 177
           NPQYMP PRQ DNYYPP+D+P  MEKQ HQG+S YGR+A MG H+S+NAQ   +++TQ+T
Sbjct: 213 NPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQIT 272

Query: 178 QHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQ 357
           Q MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPG MTVEI+G+ASQVQTAQQ
Sbjct: 273 QQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQ 332

Query: 358 LIQNFMAEAASAQQKPANGPTDNSYG--SHGSVYSSPPSNTGRTG 486
           LIQNFMAEA +  Q    G  D  Y   SH SVY+SPPSN   TG
Sbjct: 333 LIQNFMAEAGAPAQPQTGGAADQGYNPYSHSSVYASPPSNPEHTG 377


>ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
           [Glycine max]
          Length = 446

 Score =  224 bits (572), Expect = 1e-56
 Identities = 112/169 (66%), Positives = 136/169 (80%), Gaps = 9/169 (5%)
 Frame = +1

Query: 7   QYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVTQH 183
           QYMP PRQ D+YYPP+++P  +++Q HQG+S YGRDAS+GVH+S+N Q   +++TQ+TQ 
Sbjct: 266 QYMPPPRQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQ 325

Query: 184 MQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQLI 363
           MQIPLSYADAVIG AG++ISYIRR SGAT+TIQE RGVPGEMTVEI+G+ASQVQTAQQLI
Sbjct: 326 MQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLI 385

Query: 364 QNFMAEAASAQQKPANGPTD--------NSYGSHGSVYSSPPSNTGRTG 486
           QNFMAEAA+A   PA   T         NSY +HGS+Y+SPPSN G  G
Sbjct: 386 QNFMAEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSLYASPPSNPGHAG 434


>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 443

 Score =  223 bits (567), Expect = 5e-56
 Identities = 112/169 (66%), Positives = 135/169 (79%), Gaps = 9/169 (5%)
 Frame = +1

Query: 7   QYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVTQH 183
           QYMP PRQ D+YYP +++P  +++Q HQG+S YGRDAS+GVH+S+N Q   +++TQ+TQ 
Sbjct: 263 QYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQ 322

Query: 184 MQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQLI 363
           MQIPLSYADAVIG AG++ISYIRR SGAT+TIQE RGVPGEMTVEI+G+ASQVQTAQQLI
Sbjct: 323 MQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLI 382

Query: 364 QNFMAEAASAQQKPANGPTD--------NSYGSHGSVYSSPPSNTGRTG 486
           QNFMAEAA+A   PA   T         NSY +HGSVY+SPPSN G  G
Sbjct: 383 QNFMAEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSVYASPPSNPGHAG 431


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  223 bits (567), Expect = 5e-56
 Identities = 112/161 (69%), Positives = 131/161 (81%), Gaps = 4/161 (2%)
 Frame = +1

Query: 1   NPQYMPTPRQHDNYYPPSDLPS-MEKQQHQGLSMYGRDASMGVHSSTNAQPPQAVLTQVT 177
           NP YMP PRQ D+YYPP +LP  +EKQ HQG+S YGR+  MG H+ ++AQP  +++TQVT
Sbjct: 331 NPPYMPPPRQLDSYYPPPELPPPVEKQPHQGISAYGREVPMGGHAPSSAQPAPSMITQVT 390

Query: 178 QHMQIPLSYADAVIGNAGSNISYIRRVSGATITIQETRGVPGEMTVEINGSASQVQTAQQ 357
           Q MQIPLSYADAVIG AG++ISYIRR SGAT+TIQETRGVPGEMTVEING+ASQVQ AQQ
Sbjct: 391 QQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQ 450

Query: 358 LIQNFMAEAASAQQKPANGPTD---NSYGSHGSVYSSPPSN 471
           LIQNFMAEAA+  Q  A G  D   NSY +HGS+Y+SP SN
Sbjct: 451 LIQNFMAEAAAPAQAQAGGSADQGYNSYAAHGSMYASPASN 491


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