BLASTX nr result

ID: Coptis25_contig00006258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006258
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325126.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-12
ref|XP_002308409.1| predicted protein [Populus trichocarpa] gi|2...    77   6e-12
ref|XP_004172412.1| PREDICTED: uncharacterized LOC101209712 [Cuc...    75   2e-11
ref|XP_004146680.1| PREDICTED: uncharacterized protein LOC101209...    75   2e-11
ref|XP_002529404.1| conserved hypothetical protein [Ricinus comm...    74   8e-11

>ref|XP_002325126.1| predicted protein [Populus trichocarpa] gi|222866560|gb|EEF03691.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score = 78.6 bits (192), Expect = 3e-12
 Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 15/112 (13%)
 Frame = +3

Query: 792  PSYV---EEAKTRYKFQTLMQDYQDLHKETEAKKRKIQVTKRRSRVLLSEVGFLRQRYEE 962
            PSY    E+ +  +K Q+LMQDY++L+KETEAKKRK+Q+ +++   L++EV FLR+RY+ 
Sbjct: 16   PSYATMYEDPRIMFKHQSLMQDYEELYKETEAKKRKLQMVRQKKLTLMAEVRFLRRRYKY 75

Query: 963  LMEYKSRE----------QEEVARTKTLQAQRDV--REVALRNPAPVLDLNQ 1082
            L + K ++          Q  V  +K L+ ++       ALR P P  DLNQ
Sbjct: 76   LTQNKPKKAPMERSFVQPQNLVPASKNLKKEKSYSGNNAALRPPVPRFDLNQ 127


>ref|XP_002308409.1| predicted protein [Populus trichocarpa] gi|222854385|gb|EEE91932.1|
            predicted protein [Populus trichocarpa]
          Length = 259

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 14/113 (12%)
 Frame = +3

Query: 786  SSPSYV---EEAKTRYKFQTLMQDYQDLHKETEAKKRKIQVTKRRSRVLLSEVGFLRQRY 956
            S PSY    E+ +   K Q+LMQDY +L+KETEAKKRK+Q+ +++   L++EV FLR+RY
Sbjct: 14   SPPSYAAMYEDPRIMLKHQSLMQDYDELYKETEAKKRKLQMMRQKKLTLMAEVRFLRRRY 73

Query: 957  EELMEYKSR----EQEEVARTKTLQAQRDVRE-------VALRNPAPVLDLNQ 1082
            + L + KS+    EQ  V     + A + ++E        +LR P P  DLNQ
Sbjct: 74   KYLTQNKSQKPPMEQNFVQPQNLVTASKKLKEKNSCGNNSSLRPPVPRFDLNQ 126


>ref|XP_004172412.1| PREDICTED: uncharacterized LOC101209712 [Cucumis sativus]
          Length = 250

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 36/84 (42%), Positives = 58/84 (69%)
 Frame = +3

Query: 804  EEAKTRYKFQTLMQDYQDLHKETEAKKRKIQVTKRRSRVLLSEVGFLRQRYEELMEYKSR 983
            E++KTR+K Q+L+QDY DL KET   KRK+Q+ K++   L++EV FLR+RYE LM+ +  
Sbjct: 15   EDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRFLRKRYEYLMKNQPS 74

Query: 984  EQEEVARTKTLQAQRDVREVALRN 1055
             ++  +  +T+Q ++   +VA  N
Sbjct: 75   TKDHYSNVETVQQKQWKNQVANNN 98


>ref|XP_004146680.1| PREDICTED: uncharacterized protein LOC101209712 [Cucumis sativus]
          Length = 255

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 36/84 (42%), Positives = 58/84 (69%)
 Frame = +3

Query: 804  EEAKTRYKFQTLMQDYQDLHKETEAKKRKIQVTKRRSRVLLSEVGFLRQRYEELMEYKSR 983
            E++KTR+K Q+L+QDY DL KET   KRK+Q+ K++   L++EV FLR+RYE LM+ +  
Sbjct: 15   EDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEVRFLRKRYEYLMKNQPS 74

Query: 984  EQEEVARTKTLQAQRDVREVALRN 1055
             ++  +  +T+Q ++   +VA  N
Sbjct: 75   TKDHYSNVETVQQKQWKNQVANNN 98


>ref|XP_002529404.1| conserved hypothetical protein [Ricinus communis]
            gi|223531152|gb|EEF33000.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 262

 Score = 73.6 bits (179), Expect = 8e-11
 Identities = 47/115 (40%), Positives = 69/115 (60%), Gaps = 16/115 (13%)
 Frame = +3

Query: 786  SSPSYV----EEAKTRYKFQTLMQDYQDLHKETEAKKRKIQVTKRRSRVLLSEVGFLRQR 953
            SSPS      E+ + R K QTLMQD+++L+KETE +K+K+Q+ K +   LL+EV FLRQR
Sbjct: 13   SSPSIYATLYEDPRARLKHQTLMQDFEELYKETEDQKKKLQMMKHKKLTLLAEVRFLRQR 72

Query: 954  YEELMEYKSR----EQEEVARTKTLQAQRDVR--------EVALRNPAPVLDLNQ 1082
            ++ LM  +S     E + V + K +   R+VR        + AL+ PA   DLN+
Sbjct: 73   FKYLMLDQSHTPAPEPKYVQKQKLVNGIRNVRKEKHYSGNDAALQRPAARCDLNR 127


Top