BLASTX nr result
ID: Coptis25_contig00006256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006256 (645 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI14966.3| unnamed protein product [Vitis vinifera] 97 3e-18 ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 97 3e-18 emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera] 97 3e-18 ref|XP_003549600.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 90 3e-16 ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|2... 88 1e-15 >emb|CBI14966.3| unnamed protein product [Vitis vinifera] Length = 132 Score = 97.1 bits (240), Expect = 3e-18 Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 3/113 (2%) Frame = +1 Query: 1 DVKDIKCVINYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXXHSNAKFARDLVKLLQEARQ 180 DVKDIKCVINYDFP+SLEDYVH HSNAKFARDL+K+LQEA Q Sbjct: 20 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 79 Query: 181 LVSPALATLAXXXXXXXXXXXXXXXXXXXXXXXXQ---ISGSNTIPIGGRKQW 330 +VSPAL+ +A ISGSNTIP+G R+ W Sbjct: 80 VVSPALSAMARSSGSAFGGSGGNFRSRGRGGSFGNRGLISGSNTIPLGARRPW 132 >ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis vinifera] Length = 611 Score = 97.1 bits (240), Expect = 3e-18 Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 3/113 (2%) Frame = +1 Query: 1 DVKDIKCVINYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXXHSNAKFARDLVKLLQEARQ 180 DVKDIKCVINYDFP+SLEDYVH HSNAKFARDL+K+LQEA Q Sbjct: 499 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 558 Query: 181 LVSPALATLAXXXXXXXXXXXXXXXXXXXXXXXXQ---ISGSNTIPIGGRKQW 330 +VSPAL+ +A ISGSNTIP+G R+ W Sbjct: 559 VVSPALSAMARSSGSAFGGSGGNFRSRGRGGSFGNRGLISGSNTIPLGARRPW 611 >emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera] Length = 692 Score = 97.1 bits (240), Expect = 3e-18 Identities = 54/113 (47%), Positives = 62/113 (54%), Gaps = 3/113 (2%) Frame = +1 Query: 1 DVKDIKCVINYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXXHSNAKFARDLVKLLQEARQ 180 DVKDIKCVINYDFP+SLEDYVH HSNAKFARDL+K+LQEA Q Sbjct: 580 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 639 Query: 181 LVSPALATLAXXXXXXXXXXXXXXXXXXXXXXXXQ---ISGSNTIPIGGRKQW 330 +VSPAL+ +A ISGSNTIP+G R+ W Sbjct: 640 VVSPALSAMARSSGSAFGGSGGNFRSRGRGGSFGNRGLISGSNTIPLGARRPW 692 >ref|XP_003549600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine max] Length = 602 Score = 90.1 bits (222), Expect = 3e-16 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 2/112 (1%) Frame = +1 Query: 1 DVKDIKCVINYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXXHSNAKFARDLVKLLQEARQ 180 DVKDIKCVINYDFPTSLEDYVH H+NAKFARDL+K+LQ+A Q Sbjct: 488 DVKDIKCVINYDFPTSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFARDLIKILQDAGQ 547 Query: 181 LVSPALATLAXXXXXXXXXXXXXXXXXXXXXXXXQ--ISGSNTIPIGGRKQW 330 VSPAL L + SGSN IP+G ++ W Sbjct: 548 TVSPALTALVRSAGSGQFGSGGGFRSRGRGGYGNRGLTSGSNAIPLGSKRPW 599 >ref|XP_002318665.1| predicted protein [Populus trichocarpa] gi|222859338|gb|EEE96885.1| predicted protein [Populus trichocarpa] Length = 541 Score = 88.2 bits (217), Expect = 1e-15 Identities = 49/112 (43%), Positives = 60/112 (53%), Gaps = 2/112 (1%) Frame = +1 Query: 1 DVKDIKCVINYDFPTSLEDYVHXXXXXXXXXXXXXXXXXXXHSNAKFARDLVKLLQEARQ 180 DVKDIKCVINYDFP+SLEDYVH SNAKFAR L+++LQE+ Q Sbjct: 430 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGARGTAFTFFTDSNAKFARGLIRILQESGQ 489 Query: 181 LVSPALATLAXXXXXXXXXXXXXXXXXXXXXXXXQ--ISGSNTIPIGGRKQW 330 +V PAL+ LA + ISGSNT+P+G R+ W Sbjct: 490 IVPPALSALARSSGSFGGSAGNFRSRGRGGSFGNRGSISGSNTVPLGARRPW 541