BLASTX nr result

ID: Coptis25_contig00006246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006246
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002523466.1| Dynamin-2A, putative [Ricinus communis] gi|2...   150   1e-34
ref|XP_002527857.1| Dynamin-2A, putative [Ricinus communis] gi|2...   148   4e-34
ref|XP_002452584.1| hypothetical protein SORBIDRAFT_04g028510 [S...   147   9e-34
ref|XP_004141527.1| PREDICTED: dynamin-2B-like [Cucumis sativus]...   146   2e-33

>ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|222870945|gb|EEF08076.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/81 (87%), Positives = 76/81 (93%)
 Frame = +2

Query: 2   PNLLSGLQGKSQVVEDELVRLGEQMVQSAEGTRAIALELCREFEDRFLAHFATGEGSGWK 181
           PN+LSGLQGKSQ V+DEL+RLGEQMVQSAEGTRAIALELCREFED+FL H  TGEGSGWK
Sbjct: 303 PNVLSGLQGKSQTVQDELMRLGEQMVQSAEGTRAIALELCREFEDKFLQHIMTGEGSGWK 362

Query: 182 VVASFEGNFPNRINQLPLDRH 244
           +VASFEGNFPNRI QLPLDRH
Sbjct: 363 IVASFEGNFPNRIKQLPLDRH 383


>ref|XP_002523466.1| Dynamin-2A, putative [Ricinus communis] gi|223537294|gb|EEF38925.1|
           Dynamin-2A, putative [Ricinus communis]
          Length = 823

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = +2

Query: 2   PNLLSGLQGKSQVVEDELVRLGEQMVQSAEGTRAIALELCREFEDRFLAHFATGEGSGWK 181
           PNLLSGLQGKSQ+V+DELVRLGEQMV+S EGTRAIALELCREFED+FL H  TGEG+GWK
Sbjct: 304 PNLLSGLQGKSQIVQDELVRLGEQMVESPEGTRAIALELCREFEDKFLQHITTGEGAGWK 363

Query: 182 VVASFEGNFPNRINQLPLDRH 244
           +VASFEGNFPNRI QLPLDRH
Sbjct: 364 IVASFEGNFPNRIKQLPLDRH 384


>ref|XP_002527857.1| Dynamin-2A, putative [Ricinus communis] gi|223532781|gb|EEF34560.1|
           Dynamin-2A, putative [Ricinus communis]
          Length = 691

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = +2

Query: 2   PNLLSGLQGKSQVVEDELVRLGEQMVQSAEGTRAIALELCREFEDRFLAHFATGEGSGWK 181
           PNLLSGLQGKSQ+V+DELVRLGEQMV S+EGTRA+ALELCREFED+FL H A GEG+GWK
Sbjct: 313 PNLLSGLQGKSQIVQDELVRLGEQMVSSSEGTRALALELCREFEDKFLQHLAGGEGNGWK 372

Query: 182 VVASFEGNFPNRINQLPLDRH 244
           VVASFEGNFPNRI QLPLDRH
Sbjct: 373 VVASFEGNFPNRIKQLPLDRH 393


>ref|XP_002452584.1| hypothetical protein SORBIDRAFT_04g028510 [Sorghum bicolor]
           gi|241932415|gb|EES05560.1| hypothetical protein
           SORBIDRAFT_04g028510 [Sorghum bicolor]
          Length = 921

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = +2

Query: 2   PNLLSGLQGKSQVVEDELVRLGEQMVQSAEGTRAIALELCREFEDRFLAHFATGEGSGWK 181
           PNLL+GLQGKSQ+V+DEL RLGEQMVQSAEGTRA+ALELCREFED+FLAH  +GEGSGWK
Sbjct: 316 PNLLTGLQGKSQIVQDELARLGEQMVQSAEGTRAVALELCREFEDKFLAHITSGEGSGWK 375

Query: 182 VVASFEGNFPNRINQLPLDRH 244
           +VASFEG FP+RI QLPLDRH
Sbjct: 376 IVASFEGKFPDRIKQLPLDRH 396


>ref|XP_004141527.1| PREDICTED: dynamin-2B-like [Cucumis sativus]
           gi|449481470|ref|XP_004156193.1| PREDICTED:
           dynamin-2B-like [Cucumis sativus]
          Length = 928

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/81 (83%), Positives = 74/81 (91%)
 Frame = +2

Query: 2   PNLLSGLQGKSQVVEDELVRLGEQMVQSAEGTRAIALELCREFEDRFLAHFATGEGSGWK 181
           PNLLSGLQGKSQVV+DELVRLGEQMV   EGTRA+ALELCREFED+FL H  +GEG+GWK
Sbjct: 312 PNLLSGLQGKSQVVQDELVRLGEQMVNGVEGTRALALELCREFEDKFLQHIGSGEGAGWK 371

Query: 182 VVASFEGNFPNRINQLPLDRH 244
           +VASFEGNFPNRI QLPLDRH
Sbjct: 372 IVASFEGNFPNRIKQLPLDRH 392


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