BLASTX nr result
ID: Coptis25_contig00006239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006239 (706 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 228 e-101 ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 228 e-101 emb|CBI27494.3| unnamed protein product [Vitis vinifera] 228 e-101 ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 227 e-100 gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana] 226 1e-98 >ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis vinifera] Length = 470 Score = 228 bits (581), Expect(2) = e-101 Identities = 112/136 (82%), Positives = 127/136 (93%) Frame = +2 Query: 53 VLDEADRLLNEEFEESIDNILKAIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEAASK 232 VLDEADRLLN++FE++ID IL IPRERKTYLFSATMTKKVRKLQRACLRNPVKIE ASK Sbjct: 191 VLDEADRLLNDDFEKAIDEILSVIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEVASK 250 Query: 233 YSTVDTLKQQYRFVPAKYKDCYLVFILSDIPGSTSMVFTRTCESTRLLALILRNLGFGAI 412 YSTVDTLKQQYRFVPAKYK+CYLV+IL+++ GST+MVFTRTC++TRLLAL+LRNLG AI Sbjct: 251 YSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLRAI 310 Query: 413 PISGQMSQAKRLGXVS 460 PISG MSQAKRLG ++ Sbjct: 311 PISGHMSQAKRLGALN 326 Score = 167 bits (423), Expect(2) = e-101 Identities = 82/84 (97%), Positives = 83/84 (98%) Frame = +3 Query: 453 ECPILICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYEL 632 EC ILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGRSGVAISLVNQYEL Sbjct: 332 ECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYEL 391 Query: 633 EWYIQIEKLIGKKLPEFPAQEEEV 704 EWYIQIEKLIGKKLPEFPAQEEEV Sbjct: 392 EWYIQIEKLIGKKLPEFPAQEEEV 415 >ref|XP_003631346.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 10-like [Vitis vinifera] Length = 436 Score = 228 bits (581), Expect(2) = e-101 Identities = 111/136 (81%), Positives = 127/136 (93%) Frame = +2 Query: 53 VLDEADRLLNEEFEESIDNILKAIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEAASK 232 VLDEADRLLN++FE++ID IL IP+ERKTYLFSATMTKKVRKLQRACLRNPVKIEA SK Sbjct: 157 VLDEADRLLNDDFEKAIDEILSVIPQERKTYLFSATMTKKVRKLQRACLRNPVKIEAGSK 216 Query: 233 YSTVDTLKQQYRFVPAKYKDCYLVFILSDIPGSTSMVFTRTCESTRLLALILRNLGFGAI 412 YSTVDTLKQQYRFVPAKYK+CYLV+IL+++ GST+MVFTRTC++TRLLAL+LRNLG GAI Sbjct: 217 YSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAI 276 Query: 413 PISGQMSQAKRLGXVS 460 PISG MSQ KRLG ++ Sbjct: 277 PISGHMSQTKRLGALN 292 Score = 165 bits (418), Expect(2) = e-101 Identities = 81/84 (96%), Positives = 82/84 (97%) Frame = +3 Query: 453 ECPILICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYEL 632 EC ILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTA AGRSGVAISLVNQYEL Sbjct: 298 ECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYEL 357 Query: 633 EWYIQIEKLIGKKLPEFPAQEEEV 704 EWYIQIEKLIGKKLPEFPAQEEEV Sbjct: 358 EWYIQIEKLIGKKLPEFPAQEEEV 381 >emb|CBI27494.3| unnamed protein product [Vitis vinifera] Length = 298 Score = 228 bits (581), Expect(2) = e-101 Identities = 111/136 (81%), Positives = 127/136 (93%) Frame = +2 Query: 53 VLDEADRLLNEEFEESIDNILKAIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEAASK 232 VLDEADRLLN++FE++ID IL IP+ERKTYLFSATMTKKVRKLQRACLRNPVKIEA SK Sbjct: 19 VLDEADRLLNDDFEKAIDEILSVIPQERKTYLFSATMTKKVRKLQRACLRNPVKIEAGSK 78 Query: 233 YSTVDTLKQQYRFVPAKYKDCYLVFILSDIPGSTSMVFTRTCESTRLLALILRNLGFGAI 412 YSTVDTLKQQYRFVPAKYK+CYLV+IL+++ GST+MVFTRTC++TRLLAL+LRNLG GAI Sbjct: 79 YSTVDTLKQQYRFVPAKYKECYLVYILTELSGSTTMVFTRTCDATRLLALLLRNLGLGAI 138 Query: 413 PISGQMSQAKRLGXVS 460 PISG MSQ KRLG ++ Sbjct: 139 PISGHMSQTKRLGALN 154 Score = 165 bits (418), Expect(2) = e-101 Identities = 81/84 (96%), Positives = 82/84 (97%) Frame = +3 Query: 453 ECPILICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYEL 632 EC ILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTA AGRSGVAISLVNQYEL Sbjct: 160 ECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTAHAGRSGVAISLVNQYEL 219 Query: 633 EWYIQIEKLIGKKLPEFPAQEEEV 704 EWYIQIEKLIGKKLPEFPAQEEEV Sbjct: 220 EWYIQIEKLIGKKLPEFPAQEEEV 243 >ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis sativus] Length = 449 Score = 227 bits (578), Expect(2) = e-100 Identities = 112/136 (82%), Positives = 128/136 (94%) Frame = +2 Query: 53 VLDEADRLLNEEFEESIDNILKAIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEAASK 232 VLDEADRLLNE+FE+SID IL IPRER+TYLFSATMTKKVRKLQRACLRNPVKIEAA+K Sbjct: 157 VLDEADRLLNEDFEKSIDEILNEIPRERRTYLFSATMTKKVRKLQRACLRNPVKIEAATK 216 Query: 233 YSTVDTLKQQYRFVPAKYKDCYLVFILSDIPGSTSMVFTRTCESTRLLALILRNLGFGAI 412 YSTVDTLKQQY F+PAKYK+CYLV+IL+++ GSTSMVFTRTC++TRLL+LILRNLG AI Sbjct: 217 YSTVDTLKQQYCFIPAKYKECYLVYILTEMSGSTSMVFTRTCDATRLLSLILRNLGLRAI 276 Query: 413 PISGQMSQAKRLGXVS 460 PISGQM+QAKRLG ++ Sbjct: 277 PISGQMTQAKRLGALN 292 Score = 163 bits (412), Expect(2) = e-100 Identities = 80/84 (95%), Positives = 82/84 (97%) Frame = +3 Query: 453 ECPILICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYEL 632 EC ILICTDVASRGLDIPSVDMVINYDIP+NSKDYIHRVGRTARAGRSGVAISLVNQYEL Sbjct: 298 ECNILICTDVASRGLDIPSVDMVINYDIPSNSKDYIHRVGRTARAGRSGVAISLVNQYEL 357 Query: 633 EWYIQIEKLIGKKLPEFPAQEEEV 704 EWYIQIEKLIGKKLP+F AQEEEV Sbjct: 358 EWYIQIEKLIGKKLPQFSAQEEEV 381 >gb|AAM65614.1| replication protein A1-like [Arabidopsis thaliana] Length = 456 Score = 226 bits (576), Expect(2) = 1e-98 Identities = 111/136 (81%), Positives = 128/136 (94%) Frame = +2 Query: 53 VLDEADRLLNEEFEESIDNILKAIPRERKTYLFSATMTKKVRKLQRACLRNPVKIEAASK 232 VLDEADRLLNE+FE+S++ IL+ IPRERKT+LFSATMTKKVRKLQRACLRNPVKIEAASK Sbjct: 169 VLDEADRLLNEDFEKSLNQILEEIPRERKTFLFSATMTKKVRKLQRACLRNPVKIEAASK 228 Query: 233 YSTVDTLKQQYRFVPAKYKDCYLVFILSDIPGSTSMVFTRTCESTRLLALILRNLGFGAI 412 YSTVDTLKQQYRFV AKYKDCYLV+ILS++P STSM+FTRTC+ TR LAL+LR+LGF AI Sbjct: 229 YSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAI 288 Query: 413 PISGQMSQAKRLGXVS 460 PISGQM+Q+KRLG ++ Sbjct: 289 PISGQMTQSKRLGALN 304 Score = 160 bits (404), Expect(2) = 1e-98 Identities = 76/84 (90%), Positives = 81/84 (96%) Frame = +3 Query: 453 ECPILICTDVASRGLDIPSVDMVINYDIPANSKDYIHRVGRTARAGRSGVAISLVNQYEL 632 EC IL+CTDVASRGLDIPSVD+VINYDIP NSKDYIHRVGRTARAGRSGV ISLVNQYEL Sbjct: 310 ECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYEL 369 Query: 633 EWYIQIEKLIGKKLPEFPAQEEEV 704 EWYIQIEKLIGKKLPE+PA+E+EV Sbjct: 370 EWYIQIEKLIGKKLPEYPAEEDEV 393