BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006235
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana ta...    79   2e-22
ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|1...    80   2e-21
ref|XP_002283849.1| PREDICTED: proteasome subunit alpha type-3 [...    80   2e-21
ref|NP_180270.1| proteasome subunit alpha type-3 [Arabidopsis th...    81   5e-21
emb|CAA74027.1| multicatalytic endopeptidase complex, proteasome...    81   5e-21

>emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum]
          Length = 249

 Score = 79.3 bits (194), Expect(2) = 2e-22
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -2

Query: 300 KTVDNSGTVIGIKCKDGIVMGVEKLIASKMMLSGSNRRIHSV 175
           K VDNSGTV+GIKCKDGIV+GVEKLIASKMML GSNRRIHSV
Sbjct: 29  KAVDNSGTVVGIKCKDGIVLGVEKLIASKMMLPGSNRRIHSV 70



 Score = 51.2 bits (121), Expect(2) = 2e-22
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -1

Query: 187 NSLCRHYGMVVARLAAEGKQIVARTKSEATNYE 89
           +S+ RH GM VA LAA+G+QIVARTKSEATNYE
Sbjct: 68  HSVHRHSGMAVAGLAADGRQIVARTKSEATNYE 100


>ref|XP_002299648.1| predicted protein [Populus trichocarpa] gi|118488197|gb|ABK95918.1|
           unknown [Populus trichocarpa]
           gi|222846906|gb|EEE84453.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score = 80.1 bits (196), Expect(2) = 2e-21
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 303 SKTVDNSGTVIGIKCKDGIVMGVEKLIASKMMLSGSNRRIHSV 175
           +K VDNSGTVIGIKCKDGIVMGVEKLIASKMML GSNRRIH+V
Sbjct: 28  AKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHAV 70



 Score = 47.0 bits (110), Expect(2) = 2e-21
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -1

Query: 175 RHYGMVVARLAAEGKQIVARTKSEATNYE 89
           RH GM VA LAA+G+QIVAR KSEATNY+
Sbjct: 72  RHSGMAVAGLAADGRQIVARAKSEATNYQ 100


>ref|XP_002283849.1| PREDICTED: proteasome subunit alpha type-3 [Vitis vinifera]
           gi|147805763|emb|CAN65016.1| hypothetical protein
           VITISV_034262 [Vitis vinifera]
           gi|297741727|emb|CBI32859.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score = 80.1 bits (196), Expect(2) = 2e-21
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 303 SKTVDNSGTVIGIKCKDGIVMGVEKLIASKMMLSGSNRRIHSV 175
           +K VDNSGTVIGIKCKDGIV+GVEKLIASKMML GSNRRIHSV
Sbjct: 28  AKAVDNSGTVIGIKCKDGIVLGVEKLIASKMMLPGSNRRIHSV 70



 Score = 47.0 bits (110), Expect(2) = 2e-21
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = -1

Query: 187 NSLCRHYGMVVARLAAEGKQIVARTKSEATNYE 89
           +S+ RH GM VA LAA+G+QIVAR K+EATNY+
Sbjct: 68  HSVHRHSGMAVAGLAADGRQIVARAKAEATNYQ 100


>ref|NP_180270.1| proteasome subunit alpha type-3 [Arabidopsis thaliana]
           gi|12644056|sp|O23715.2|PSA3_ARATH RecName:
           Full=Proteasome subunit alpha type-3; AltName: Full=20S
           proteasome alpha subunit G-1; AltName: Full=DiDi 17A-2a;
           AltName: Full=Proteasome component 8; AltName:
           Full=Proteasome subunit alpha type-7
           gi|14030729|gb|AAK53039.1|AF375455_1 At2g27020/T20P8.7
           [Arabidopsis thaliana] gi|3421096|gb|AAC32064.1| 20S
           proteasome subunit PAG1 [Arabidopsis thaliana]
           gi|3885332|gb|AAC77860.1| 20S proteasome alpha subunit G
           (PAG1) [Arabidopsis thaliana] gi|21617882|gb|AAM66932.1|
           20S proteasome subunit C8 (PAG1/PRC8_ARATH) [Arabidopsis
           thaliana] gi|21700783|gb|AAM70515.1| At2g27020/T20P8.7
           [Arabidopsis thaliana] gi|330252829|gb|AEC07923.1|
           proteasome subunit alpha type-3 [Arabidopsis thaliana]
          Length = 249

 Score = 80.9 bits (198), Expect(2) = 5e-21
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 303 SKTVDNSGTVIGIKCKDGIVMGVEKLIASKMMLSGSNRRIHSV 175
           +K VDNSGTV+GIKCKDGIVMGVEKLIASKMML GSNRRIHSV
Sbjct: 28  AKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSV 70



 Score = 45.1 bits (105), Expect(2) = 5e-21
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -1

Query: 187 NSLCRHYGMVVARLAAEGKQIVARTKSEATNYE 89
           +S+ RH GM VA LAA+G+QIVAR KSEA +YE
Sbjct: 68  HSVHRHAGMAVAGLAADGRQIVARAKSEARSYE 100


>emb|CAA74027.1| multicatalytic endopeptidase complex, proteasome component, alpha
           subunit [Arabidopsis thaliana]
          Length = 249

 Score = 80.9 bits (198), Expect(2) = 5e-21
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -2

Query: 303 SKTVDNSGTVIGIKCKDGIVMGVEKLIASKMMLSGSNRRIHSV 175
           +K VDNSGTV+GIKCKDGIVMGVEKLIASKMML GSNRRIHSV
Sbjct: 28  AKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSV 70



 Score = 45.1 bits (105), Expect(2) = 5e-21
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -1

Query: 187 NSLCRHYGMVVARLAAEGKQIVARTKSEATNYE 89
           +S+ RH GM VA LAA+G+QIVAR KSEA +YE
Sbjct: 68  HSVHRHAGMAVAGLAADGRQIVARAKSEARSYE 100