BLASTX nr result

ID: Coptis25_contig00006234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006234
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259...   154   3e-63
ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527...   151   6e-62
ref|XP_002516851.1| protein binding protein, putative [Ricinus c...   149   5e-60
ref|XP_004144971.1| PREDICTED: uncharacterized protein LOC101219...   154   3e-59
ref|XP_003594026.1| E3 ubiquitin-protein ligase MARCH1 [Medicago...   151   1e-58

>ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259554 [Vitis vinifera]
           gi|297736929|emb|CBI26130.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score =  154 bits (388), Expect(2) = 3e-63
 Identities = 77/130 (59%), Positives = 99/130 (76%)
 Frame = -3

Query: 719 LSVWHDLVVLVLISSISYFFVLEQLLSEKYKAGALVYSAPISFTLGLLGSLFAIVIAFRE 540
           +SVW D VVLVLIS+I YFF LEQLL    K  A+V +AP SFTLGLL S+FAI++A +E
Sbjct: 303 VSVWQDFVVLVLISTICYFFFLEQLLIHDMKTQAIVVAAPFSFTLGLLASIFAIILAIKE 362

Query: 539 YTWTYAALEFALVALNLHLFYTVLKMPTIYAILVSAALGFGIAMSVNGLYLYTFAYRARV 360
           Y WTYAALEFALVA+ +HLFY++L +  +YAI++SA +GFGIAMS+N LY+  F +R ++
Sbjct: 363 YIWTYAALEFALVAIIVHLFYSLLHLKAVYAIMLSAVMGFGIAMSLNSLYIQFFTWRFQI 422

Query: 359 ALMETNSNAV 330
                NSN V
Sbjct: 423 T---QNSNPV 429



 Score =  115 bits (288), Expect(2) = 3e-63
 Identities = 53/73 (72%), Positives = 61/73 (83%)
 Frame = -1

Query: 1018 VCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTL 839
            VCRIC + +CE GNT KMECSCKG LRL HE C +KWF+ KGNK CDVCRQEV+NLPVTL
Sbjct: 220  VCRIC-LEVCEEGNTLKMECSCKGALRLLHEDCAIKWFTTKGNKTCDVCRQEVQNLPVTL 278

Query: 838  LRVHSSAQREYRR 800
            LRV +SAQR+ R+
Sbjct: 279  LRVPTSAQRDNRQ 291


>ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527094 [Glycine max]
          Length = 422

 Score =  151 bits (382), Expect(2) = 6e-62
 Identities = 72/124 (58%), Positives = 95/124 (76%)
 Frame = -3

Query: 728 PQPLSVWHDLVVLVLISSISYFFVLEQLLSEKYKAGALVYSAPISFTLGLLGSLFAIVIA 549
           P+ +S W D VVLVLIS+I YFF LEQLL  + K  A++ +AP +FTLGLL S+FA+++A
Sbjct: 293 PESISAWQDFVVLVLISTICYFFFLEQLLLPELKTQAIIIAAPFAFTLGLLASIFAVILA 352

Query: 548 FREYTWTYAALEFALVALNLHLFYTVLKMPTIYAILVSAALGFGIAMSVNGLYLYTFAYR 369
            +EY WTYAALEFALVAL +HLFYT+L +  IYAIL+S+ LGFGIAM +N  Y+    +R
Sbjct: 353 IKEYIWTYAALEFALVALTVHLFYTMLHLTAIYAILLSSVLGFGIAMGINYAYIQFVTWR 412

Query: 368 ARVA 357
            +V+
Sbjct: 413 LQVS 416



 Score =  113 bits (283), Expect(2) = 6e-62
 Identities = 51/69 (73%), Positives = 60/69 (86%)
 Frame = -1

Query: 1018 VCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTL 839
            VCRICF  +C+  NTFKMECSCKGDLRL HE C++KWFS KG+K+CDVCRQEV+NLPVTL
Sbjct: 214  VCRICF-DVCDERNTFKMECSCKGDLRLVHEECLIKWFSTKGDKECDVCRQEVQNLPVTL 272

Query: 838  LRVHSSAQR 812
            LRV SS ++
Sbjct: 273  LRVTSSVRQ 281


>ref|XP_002516851.1| protein binding protein, putative [Ricinus communis]
           gi|223543939|gb|EEF45465.1| protein binding protein,
           putative [Ricinus communis]
          Length = 441

 Score =  149 bits (377), Expect(2) = 5e-60
 Identities = 70/121 (57%), Positives = 95/121 (78%)
 Frame = -3

Query: 725 QPLSVWHDLVVLVLISSISYFFVLEQLLSEKYKAGALVYSAPISFTLGLLGSLFAIVIAF 546
           + +S W D VVLV+IS+I YFF LEQLL    +  A++ +AP +FTLGLL S+FAI++A 
Sbjct: 276 EAISAWQDFVVLVIISTICYFFFLEQLLIHDMRTQAIIIAAPFAFTLGLLASIFAIILAI 335

Query: 545 REYTWTYAALEFALVALNLHLFYTVLKMPTIYAILVSAALGFGIAMSVNGLYLYTFAYRA 366
           REY WTYAAL+FALVA+ +HLFY++L +  IYAILVS+ LGFGIAM++N LY+  +A+R 
Sbjct: 336 REYIWTYAALQFALVAIFVHLFYSMLHLKAIYAILVSSVLGFGIAMTINSLYIQYYAWRV 395

Query: 365 R 363
           +
Sbjct: 396 Q 396



 Score =  108 bits (271), Expect(2) = 5e-60
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 1018 VCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTL 839
            VCRIC + +C+ GN  KMECSCKG LRL HE C +KWFSIKGNK C+VC QEV+NLPVTL
Sbjct: 195  VCRIC-LDVCQEGNMLKMECSCKGALRLVHEECAIKWFSIKGNKNCEVCGQEVKNLPVTL 253

Query: 838  LRVHSSAQREYRR 800
            LRV  SAQ   R+
Sbjct: 254  LRVTGSAQSNNRQ 266


>ref|XP_004144971.1| PREDICTED: uncharacterized protein LOC101219420 [Cucumis sativus]
           gi|449470479|ref|XP_004152944.1| PREDICTED:
           uncharacterized protein LOC101219282 [Cucumis sativus]
           gi|449507660|ref|XP_004163094.1| PREDICTED:
           uncharacterized protein LOC101227905 [Cucumis sativus]
          Length = 423

 Score =  154 bits (390), Expect(2) = 3e-59
 Identities = 73/121 (60%), Positives = 95/121 (78%)
 Frame = -3

Query: 719 LSVWHDLVVLVLISSISYFFVLEQLLSEKYKAGALVYSAPISFTLGLLGSLFAIVIAFRE 540
           +SVW D VVLVLIS+I YFF LEQLL    K  A+VY+AP +   GL  S+F++++A RE
Sbjct: 297 VSVWQDFVVLVLISTICYFFFLEQLLIHDLKTQAIVYAAPFALVFGLTSSIFSVILAIRE 356

Query: 539 YTWTYAALEFALVALNLHLFYTVLKMPTIYAILVSAALGFGIAMSVNGLYLYTFAYRARV 360
           Y WTYAALEFALVA+ LHLFYT+LK+  IYAIL+SA LGFG+AMS+N +Y++ + +R R+
Sbjct: 357 YIWTYAALEFALVAIILHLFYTLLKLKAIYAILLSAILGFGVAMSLNAVYIHYYIWRVRI 416

Query: 359 A 357
           A
Sbjct: 417 A 417



 Score =  101 bits (251), Expect(2) = 3e-59
 Identities = 45/73 (61%), Positives = 60/73 (82%)
 Frame = -1

Query: 1018 VCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTL 839
            VCRIC +  CE  NT KMECSCKG LRL H+ C ++WFSI+G+K C+VCRQEV+NLPVTL
Sbjct: 214  VCRIC-LDPCEEENTLKMECSCKGALRLVHKHCAIEWFSIRGSKVCEVCRQEVQNLPVTL 272

Query: 838  LRVHSSAQREYRR 800
            LR+ ++A+++ R+
Sbjct: 273  LRIPTTARQDGRQ 285


>ref|XP_003594026.1| E3 ubiquitin-protein ligase MARCH1 [Medicago truncatula]
           gi|355483074|gb|AES64277.1| E3 ubiquitin-protein ligase
           MARCH1 [Medicago truncatula]
          Length = 424

 Score =  151 bits (381), Expect(2) = 1e-58
 Identities = 74/126 (58%), Positives = 95/126 (75%)
 Frame = -3

Query: 725 QPLSVWHDLVVLVLISSISYFFVLEQLLSEKYKAGALVYSAPISFTLGLLGSLFAIVIAF 546
           + +S W D VVLVLIS+I YFF LEQLL    K  A++ SAP SFTLGLLGS+FAIV+A 
Sbjct: 296 ETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFSFTLGLLGSVFAIVLAI 355

Query: 545 REYTWTYAALEFALVALNLHLFYTVLKMPTIYAILVSAALGFGIAMSVNGLYLYTFAYRA 366
           +EY WTYAALEFALVA+ +HLFYT+L +  IY+IL+S   GFGIAM +N +Y+    +R 
Sbjct: 356 KEYIWTYAALEFALVAITVHLFYTMLHLAPIYSILLSTVFGFGIAMGINYIYIQYVNWRL 415

Query: 365 RVALME 348
           +V++ E
Sbjct: 416 QVSINE 421



 Score =  102 bits (255), Expect(2) = 1e-58
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -1

Query: 1018 VCRICFISLCEGGNTFKMECSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTL 839
            VCRIC +  C+ GNTFKMEC CKGDLRL HE C++KW + KG  KC++C + V+NLPVTL
Sbjct: 215  VCRIC-LDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTL 273

Query: 838  LRVHSSAQREYR 803
            LRV SS QR  R
Sbjct: 274  LRVSSSVQRRNR 285


Top