BLASTX nr result

ID: Coptis25_contig00006224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006224
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633115.1| PREDICTED: asparaginyl-tRNA synthetase, cyto...   169   3e-40
emb|CBI27958.3| unnamed protein product [Vitis vinifera]              169   3e-40
ref|XP_002309236.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_002330501.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|NP_200479.1| asparaginyl-tRNA synthetase, cytoplasmic 1 [Ara...   162   3e-38

>ref|XP_003633115.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic 1-like [Vitis
           vinifera]
          Length = 571

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = +3

Query: 3   LVPKVGELIGGSQREERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMV 182
           LVPKVGELIGGSQREERYEVIEKRIL+ GLPLEPYEWYLDLRRYGTVKH GFGLGFERM+
Sbjct: 488 LVPKVGELIGGSQREERYEVIEKRILEMGLPLEPYEWYLDLRRYGTVKHCGFGLGFERMI 547

Query: 183 LFATGLDNIRDVIPFPRYPGRADL 254
           LFATG+DNIRDVIPFPRYPGRADL
Sbjct: 548 LFATGIDNIRDVIPFPRYPGRADL 571


>emb|CBI27958.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = +3

Query: 3   LVPKVGELIGGSQREERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMV 182
           LVPKVGELIGGSQREERYEVIEKRIL+ GLPLEPYEWYLDLRRYGTVKH GFGLGFERM+
Sbjct: 434 LVPKVGELIGGSQREERYEVIEKRILEMGLPLEPYEWYLDLRRYGTVKHCGFGLGFERMI 493

Query: 183 LFATGLDNIRDVIPFPRYPGRADL 254
           LFATG+DNIRDVIPFPRYPGRADL
Sbjct: 494 LFATGIDNIRDVIPFPRYPGRADL 517


>ref|XP_002309236.1| predicted protein [Populus trichocarpa] gi|222855212|gb|EEE92759.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/84 (89%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   LVPKVGELIGGSQREERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMV 182
           LVPKVGELIGGSQREERYEVI++RI + GLP+EPYEWYLDLRRYGTVKH GFGLGFERM+
Sbjct: 386 LVPKVGELIGGSQREERYEVIQQRIAEMGLPIEPYEWYLDLRRYGTVKHCGFGLGFERMI 445

Query: 183 LFATGLDNIRDVIPFPRYPGRADL 254
           LFATG+DNIRDVIPFPRYPGRADL
Sbjct: 446 LFATGIDNIRDVIPFPRYPGRADL 469


>ref|XP_002330501.1| predicted protein [Populus trichocarpa] gi|222872435|gb|EEF09566.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/84 (89%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   LVPKVGELIGGSQREERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMV 182
           LVPKVGELIGGSQREERYEVI++RI + GLPLEPY+WYLDLRRYGTVKH GFGLGFERM+
Sbjct: 485 LVPKVGELIGGSQREERYEVIQQRIAEMGLPLEPYDWYLDLRRYGTVKHCGFGLGFERMI 544

Query: 183 LFATGLDNIRDVIPFPRYPGRADL 254
           LFATG+DNIRDVIPFPRYPGRADL
Sbjct: 545 LFATGIDNIRDVIPFPRYPGRADL 568


>ref|NP_200479.1| asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana]
           gi|20140329|sp|Q9SW96.1|SYNC1_ARATH RecName:
           Full=Asparagine--tRNA ligase, cytoplasmic 1; AltName:
           Full=Asparaginyl-tRNA synthetase 1; Short=AsnRS 1;
           AltName: Full=Protein EMBRYO DEFECTIVE 2755
           gi|5670315|gb|AAD46681.1|AF170909_1 SYNC1 protein
           [Arabidopsis thaliana] gi|10176772|dbj|BAB09886.1| SYNC1
           protein [Arabidopsis thaliana]
           gi|133778862|gb|ABO38771.1| At5g56680 [Arabidopsis
           thaliana] gi|332009412|gb|AED96795.1| asparaginyl-tRNA
           synthetase, cytoplasmic 1 [Arabidopsis thaliana]
          Length = 572

 Score =  162 bits (410), Expect = 3e-38
 Identities = 75/84 (89%), Positives = 81/84 (96%)
 Frame = +3

Query: 3   LVPKVGELIGGSQREERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMV 182
           LVPKVGELIGGSQREERY+VI+KRI + GLP+EPYEWYLDLRRYGTVKH GFGLGFERM+
Sbjct: 489 LVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGFGLGFERMI 548

Query: 183 LFATGLDNIRDVIPFPRYPGRADL 254
           LFATGLDNIRDVIPFPRYPG+ADL
Sbjct: 549 LFATGLDNIRDVIPFPRYPGKADL 572


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