BLASTX nr result

ID: Coptis25_contig00006220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006220
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539756.1| PREDICTED: nudix hydrolase 9-like [Glycine max]   246   3e-63
gb|ACU19266.1| unknown [Glycine max]                                  245   8e-63
ref|XP_002284515.1| PREDICTED: nudix hydrolase 9-like [Vitis vin...   242   5e-62
emb|CBI16205.3| unnamed protein product [Vitis vinifera]              242   5e-62
ref|XP_002439176.1| hypothetical protein SORBIDRAFT_09g001790 [S...   225   5e-62

>ref|XP_003539756.1| PREDICTED: nudix hydrolase 9-like [Glycine max]
          Length = 301

 Score =  246 bits (629), Expect = 3e-63
 Identities = 117/158 (74%), Positives = 140/158 (88%)
 Frame = +3

Query: 3   FLIHSEDDPIRCQHTSSPLGNGAVVETADSKIIVLKRSDNVGEFPGHFVFPGGHPEPQEI 182
           FL+ SEDD + CQHTS+PLGNGAVVET D+KI+VL+RSDNVGEFPGHFVFPGGHPEPQEI
Sbjct: 116 FLVPSEDDSVLCQHTSNPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEPQEI 175

Query: 183 GISAHRYDQDLTDSEQLNRKVSQEMFDSIIREVVEEIGVPVSSLNDPIFIGISRRELNVR 362
           GI++H+Y+++LT+S  +N KVSQEMFDSI+REVVEEIGVP SSL+ P FIGISRR LNVR
Sbjct: 176 GITSHQYNKELTES--INTKVSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRNLNVR 233

Query: 363 PTAFFFLKCGLESNEIQQLYSNAQDSYESVQLYSVSRV 476
           P AFFF+KCGL+S E++Q YS+AQD YES QLY+V  +
Sbjct: 234 PAAFFFIKCGLDSKEVRQFYSSAQDGYESTQLYAVPMI 271


>gb|ACU19266.1| unknown [Glycine max]
          Length = 301

 Score =  245 bits (625), Expect = 8e-63
 Identities = 116/158 (73%), Positives = 140/158 (88%)
 Frame = +3

Query: 3   FLIHSEDDPIRCQHTSSPLGNGAVVETADSKIIVLKRSDNVGEFPGHFVFPGGHPEPQEI 182
           FL+ SEDD + CQHTS+PLGNGAVVET D+KI+VL+RSDNVGEFPGHFVFPGGHPEPQEI
Sbjct: 116 FLVPSEDDSVLCQHTSNPLGNGAVVETNDNKILVLQRSDNVGEFPGHFVFPGGHPEPQEI 175

Query: 183 GISAHRYDQDLTDSEQLNRKVSQEMFDSIIREVVEEIGVPVSSLNDPIFIGISRRELNVR 362
           GI++H+Y+++LT+S  +N KVSQEMFDSI+REVVEEIGVP SSL+ P FIGISRR LNVR
Sbjct: 176 GITSHQYNKELTES--INTKVSQEMFDSIVREVVEEIGVPASSLSIPAFIGISRRNLNVR 233

Query: 363 PTAFFFLKCGLESNEIQQLYSNAQDSYESVQLYSVSRV 476
           P AFFF+KCGL+S E++Q YS+AQD Y+S QLY+V  +
Sbjct: 234 PAAFFFIKCGLDSKEVRQFYSSAQDGYKSTQLYAVPMI 271


>ref|XP_002284515.1| PREDICTED: nudix hydrolase 9-like [Vitis vinifera]
          Length = 301

 Score =  242 bits (618), Expect = 5e-62
 Identities = 114/157 (72%), Positives = 137/157 (87%)
 Frame = +3

Query: 3   FLIHSEDDPIRCQHTSSPLGNGAVVETADSKIIVLKRSDNVGEFPGHFVFPGGHPEPQEI 182
           FL+ SEDD +RCQHTSSPLGNGA++ET+D +I+VL+RS+NVGEFPGHFVFPGGHPEPQEI
Sbjct: 115 FLVPSEDDSVRCQHTSSPLGNGAIIETSDKRIVVLRRSNNVGEFPGHFVFPGGHPEPQEI 174

Query: 183 GISAHRYDQDLTDSEQLNRKVSQEMFDSIIREVVEEIGVPVSSLNDPIFIGISRRELNVR 362
           GI +H++D+D+ D + +NRKVSQEMFDSI+REVVEEIGVP +SL +P+ IG+S R LNVR
Sbjct: 175 GIVSHQFDKDM-DPDFINRKVSQEMFDSIVREVVEEIGVPEASLCNPVLIGVSCRVLNVR 233

Query: 363 PTAFFFLKCGLESNEIQQLYSNAQDSYESVQLYSVSR 473
           P AFFF+KC L S EIQQLYS AQD YES  LY+VSR
Sbjct: 234 PAAFFFIKCNLHSKEIQQLYSTAQDGYESTHLYTVSR 270


>emb|CBI16205.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  242 bits (618), Expect = 5e-62
 Identities = 114/157 (72%), Positives = 137/157 (87%)
 Frame = +3

Query: 3   FLIHSEDDPIRCQHTSSPLGNGAVVETADSKIIVLKRSDNVGEFPGHFVFPGGHPEPQEI 182
           FL+ SEDD +RCQHTSSPLGNGA++ET+D +I+VL+RS+NVGEFPGHFVFPGGHPEPQEI
Sbjct: 111 FLVPSEDDSVRCQHTSSPLGNGAIIETSDKRIVVLRRSNNVGEFPGHFVFPGGHPEPQEI 170

Query: 183 GISAHRYDQDLTDSEQLNRKVSQEMFDSIIREVVEEIGVPVSSLNDPIFIGISRRELNVR 362
           GI +H++D+D+ D + +NRKVSQEMFDSI+REVVEEIGVP +SL +P+ IG+S R LNVR
Sbjct: 171 GIVSHQFDKDM-DPDFINRKVSQEMFDSIVREVVEEIGVPEASLCNPVLIGVSCRVLNVR 229

Query: 363 PTAFFFLKCGLESNEIQQLYSNAQDSYESVQLYSVSR 473
           P AFFF+KC L S EIQQLYS AQD YES  LY+VSR
Sbjct: 230 PAAFFFIKCNLHSKEIQQLYSTAQDGYESTHLYTVSR 266


>ref|XP_002439176.1| hypothetical protein SORBIDRAFT_09g001790 [Sorghum bicolor]
           gi|241944461|gb|EES17606.1| hypothetical protein
           SORBIDRAFT_09g001790 [Sorghum bicolor]
          Length = 305

 Score =  225 bits (573), Expect(2) = 5e-62
 Identities = 107/156 (68%), Positives = 129/156 (82%)
 Frame = +3

Query: 3   FLIHSEDDPIRCQHTSSPLGNGAVVETADSKIIVLKRSDNVGEFPGHFVFPGGHPEPQEI 182
           FL+ SEDD + CQH S+PLGNGA+VET+D KIIVL+RS NVGEFPG++VFPGGH EPQEI
Sbjct: 120 FLVPSEDDSVHCQHMSNPLGNGAIVETSDEKIIVLQRSYNVGEFPGYYVFPGGHSEPQEI 179

Query: 183 GISAHRYDQDLTDSEQLNRKVSQEMFDSIIREVVEEIGVPVSSLNDPIFIGISRRELNVR 362
           GI +H+ D++  D   LN +VSQEMFD IIREVVEE GVP SSL DP+FIG+SRRE+NVR
Sbjct: 180 GILSHQTDEE--DLAHLNGRVSQEMFDGIIREVVEETGVPASSLTDPVFIGVSRREMNVR 237

Query: 363 PTAFFFLKCGLESNEIQQLYSNAQDSYESVQLYSVS 470
           PTAFFF KC ++S  + +LYS AQD YES +LY+VS
Sbjct: 238 PTAFFFTKCNIDSTGVNELYSKAQDGYESTKLYAVS 273



 Score = 39.3 bits (90), Expect(2) = 5e-62
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = +2

Query: 575 YSILLEFQSELEKLATKMPGCHQGGWALYELM 670
           Y++ +E   EL+ +  +MPGCH GG+ALYELM
Sbjct: 270 YAVSVE---ELQGMTQRMPGCHNGGFALYELM 298


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