BLASTX nr result

ID: Coptis25_contig00006214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006214
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197566.1| vacuolar protein / peptidase dimerization domai...   211   2e-52
ref|XP_002871951.1| hypothetical protein ARALYDRAFT_910108 [Arab...   211   3e-52
ref|XP_003535531.1| PREDICTED: endoplasmic reticulum metallopept...   209   9e-52
dbj|BAA83809.1| 24 kDa vacuolar protein VP24 [Ipomoea batatas]        209   2e-51
ref|XP_002532753.1| ATP binding protein, putative [Ricinus commu...   207   6e-51

>ref|NP_197566.1| vacuolar protein / peptidase dimerization domain-containing protein
           [Arabidopsis thaliana] gi|110741500|dbj|BAE98701.1| 24
           kDa vacuolar protein - like [Arabidopsis thaliana]
           gi|332005489|gb|AED92872.1| vacuolar protein / peptidase
           dimerization domain-containing protein [Arabidopsis
           thaliana]
          Length = 910

 Score =  211 bits (538), Expect = 2e-52
 Identities = 104/142 (73%), Positives = 115/142 (80%)
 Frame = -3

Query: 426 KHPWRNSIRVAIDLEAMGIGGKSSIFQGGPDPWAIENFAKVAKYPSGQIIAQDLFLSGLI 247
           +HPW +++R+AIDLEAMG GGKSSIFQ GP PWAIENFA  AKYPSGQII QDLF SG+I
Sbjct: 243 QHPWSSTVRLAIDLEAMGTGGKSSIFQAGPSPWAIENFALAAKYPSGQIIGQDLFTSGII 302

Query: 246 KSATDFQVYKEVAGLSGLDFAYADITAVYHTKNDKLELLKPGSLQHLGENMLAFLLQTAT 67
           KSATDFQVYKEVAGLSGLDFA+AD TAVYHTKNDK+EL+KPGSLQHLGENMLAFLL+ A+
Sbjct: 303 KSATDFQVYKEVAGLSGLDFAFADNTAVYHTKNDKIELIKPGSLQHLGENMLAFLLRVAS 362

Query: 66  SPRFPXXXXXXXXXXXVQDQAV 1
           S   P             D AV
Sbjct: 363 SSDLPKDKTLQGEERSNPDSAV 384


>ref|XP_002871951.1| hypothetical protein ARALYDRAFT_910108 [Arabidopsis lyrata subsp.
           lyrata] gi|297317788|gb|EFH48210.1| hypothetical protein
           ARALYDRAFT_910108 [Arabidopsis lyrata subsp. lyrata]
          Length = 911

 Score =  211 bits (537), Expect = 3e-52
 Identities = 104/142 (73%), Positives = 115/142 (80%)
 Frame = -3

Query: 426 KHPWRNSIRVAIDLEAMGIGGKSSIFQGGPDPWAIENFAKVAKYPSGQIIAQDLFLSGLI 247
           +HPW +++R+AIDLEAMG GGKSSIFQ GP PWAIENFA  AKYPSGQII QDLF SG+I
Sbjct: 243 QHPWSSTVRLAIDLEAMGTGGKSSIFQAGPSPWAIENFALAAKYPSGQIIGQDLFTSGVI 302

Query: 246 KSATDFQVYKEVAGLSGLDFAYADITAVYHTKNDKLELLKPGSLQHLGENMLAFLLQTAT 67
           KSATDFQVYKEVAGLSGLDFA+AD TAVYHTKNDK+EL+KPGSLQHLGENMLAFLL+ A+
Sbjct: 303 KSATDFQVYKEVAGLSGLDFAFADNTAVYHTKNDKIELIKPGSLQHLGENMLAFLLRVAS 362

Query: 66  SPRFPXXXXXXXXXXXVQDQAV 1
           S   P             D AV
Sbjct: 363 SSDLPKDDTLQGEEKSTPDSAV 384


>ref|XP_003535531.1| PREDICTED: endoplasmic reticulum metallopeptidase 1-like [Glycine
           max]
          Length = 912

 Score =  209 bits (533), Expect = 9e-52
 Identities = 103/125 (82%), Positives = 108/125 (86%)
 Frame = -3

Query: 426 KHPWRNSIRVAIDLEAMGIGGKSSIFQGGPDPWAIENFAKVAKYPSGQIIAQDLFLSGLI 247
           +HPW  ++RVAIDLEAMGIGGKS+IFQ GP PWAIENFA VAKYPSGQ+IAQDLF SG I
Sbjct: 246 QHPWSKTVRVAIDLEAMGIGGKSTIFQAGPHPWAIENFALVAKYPSGQVIAQDLFSSGAI 305

Query: 246 KSATDFQVYKEVAGLSGLDFAYADITAVYHTKNDKLELLKPGSLQHLGENMLAFLLQTAT 67
           KSATDFQVYKEVAGLSGLDFAY D TAVYHTKNDKLELLK GSLQHLGENMLAFLL    
Sbjct: 306 KSATDFQVYKEVAGLSGLDFAYLDNTAVYHTKNDKLELLKTGSLQHLGENMLAFLLHIGA 365

Query: 66  SPRFP 52
           S   P
Sbjct: 366 SSHIP 370


>dbj|BAA83809.1| 24 kDa vacuolar protein VP24 [Ipomoea batatas]
          Length = 893

 Score =  209 bits (531), Expect = 2e-51
 Identities = 99/125 (79%), Positives = 111/125 (88%)
 Frame = -3

Query: 426 KHPWRNSIRVAIDLEAMGIGGKSSIFQGGPDPWAIENFAKVAKYPSGQIIAQDLFLSGLI 247
           +HPW N++RVA++LEAMGIGGKS IFQ GPDPWAI+NFAKVAK PSGQI++QDLF SG+I
Sbjct: 212 QHPWINTVRVAVNLEAMGIGGKSGIFQAGPDPWAIQNFAKVAKRPSGQIVSQDLFGSGVI 271

Query: 246 KSATDFQVYKEVAGLSGLDFAYADITAVYHTKNDKLELLKPGSLQHLGENMLAFLLQTAT 67
           KS TDFQVYKE+AGLSG+DFA+ D TAVYHTKNDK  LLKPGSLQHLGENML FLL  AT
Sbjct: 272 KSTTDFQVYKEIAGLSGMDFAFTDHTAVYHTKNDKHALLKPGSLQHLGENMLPFLLHVAT 331

Query: 66  SPRFP 52
           SP FP
Sbjct: 332 SPDFP 336


>ref|XP_002532753.1| ATP binding protein, putative [Ricinus communis]
           gi|223527504|gb|EEF29630.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 921

 Score =  207 bits (526), Expect = 6e-51
 Identities = 100/142 (70%), Positives = 111/142 (78%)
 Frame = -3

Query: 426 KHPWRNSIRVAIDLEAMGIGGKSSIFQGGPDPWAIENFAKVAKYPSGQIIAQDLFLSGLI 247
           +HPW  +IR+A+DLEAMGIGGKS IFQ GPDPW IEN+A  AKYPSG ++AQDLF SG+I
Sbjct: 245 QHPWSTTIRMAVDLEAMGIGGKSGIFQAGPDPWVIENYATAAKYPSGNVLAQDLFASGVI 304

Query: 246 KSATDFQVYKEVAGLSGLDFAYADITAVYHTKNDKLELLKPGSLQHLGENMLAFLLQTAT 67
           KSATDFQVYKEVAGLSGLDFAY D + VYHTKNDKLELLKPGSLQHLGENMLAFLLQ   
Sbjct: 305 KSATDFQVYKEVAGLSGLDFAYTDNSGVYHTKNDKLELLKPGSLQHLGENMLAFLLQIGP 364

Query: 66  SPRFPXXXXXXXXXXXVQDQAV 1
           +   P            +D AV
Sbjct: 365 ASHLPKDKRTVEEGKSSRDTAV 386


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