BLASTX nr result

ID: Coptis25_contig00006205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006205
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301473.1| predicted protein [Populus trichocarpa] gi|2...    87   4e-15
ref|XP_003543052.1| PREDICTED: stress-related protein-like [Glyc...    87   7e-15
gb|ACV90044.1| rubber elongation factor [Morus alba]                   86   2e-14
ref|XP_002319520.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_002283697.1| PREDICTED: stress-related protein-like [Viti...    85   3e-14

>ref|XP_002301473.1| predicted protein [Populus trichocarpa] gi|222843199|gb|EEE80746.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = +3

Query: 6   LNTLPLFPQVAHVVLPAAAYWADKYNQTVCSSAKSGYTVSSYLPLVPIEKIEKVFGGEKS 185
           LN LPLFPQVA + +P AA+W++KYNQ V S+A+ GYT++ YLPL+PIE+I KVF     
Sbjct: 163 LNRLPLFPQVAQIAVPTAAFWSEKYNQVVGSAAEEGYTIALYLPLIPIERISKVFDESIG 222

Query: 186 EEVAS-DGVVA 215
           E V S +GVVA
Sbjct: 223 EPVVSTNGVVA 233


>ref|XP_003543052.1| PREDICTED: stress-related protein-like [Glycine max]
          Length = 200

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = +3

Query: 6   LNTLPLFPQVAHVVLPAAAYWADKYNQTVCSSAKSGYTVSSYLPLVPIEKIEKVFGG 176
           LN LPLFPQVA+VVLP AAY  +KYN+ V SSA+ GY VS+YLPLVP EKI KVFGG
Sbjct: 143 LNQLPLFPQVANVVLPKAAYCTEKYNEAVVSSAEKGYRVSAYLPLVPTEKIAKVFGG 199


>gb|ACV90044.1| rubber elongation factor [Morus alba]
          Length = 252

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 41/61 (67%), Positives = 49/61 (80%)
 Frame = +3

Query: 6   LNTLPLFPQVAHVVLPAAAYWADKYNQTVCSSAKSGYTVSSYLPLVPIEKIEKVFGGEKS 185
           LN LPLFP+VA VV+P AAY+ +KYNQTV S+A+ GY VSSYLPLVP+EKI KVF    +
Sbjct: 176 LNQLPLFPKVADVVVPTAAYYTEKYNQTVISTAEKGYKVSSYLPLVPVEKIVKVFSENGA 235

Query: 186 E 188
           E
Sbjct: 236 E 236


>ref|XP_002319520.1| predicted protein [Populus trichocarpa] gi|222857896|gb|EEE95443.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +3

Query: 6   LNTLPLFPQVAHVVLPAAAYWADKYNQTVCSSAKSGYTVSSYLPLVPIEKIEKVFG 173
           LN LPLFPQVA VV+P AA+ ++KYNQTV S+A+ GY VSSYLPLVP EKI KVFG
Sbjct: 175 LNKLPLFPQVAQVVVPTAAFCSEKYNQTVVSTAEKGYRVSSYLPLVPTEKIAKVFG 230


>ref|XP_002283697.1| PREDICTED: stress-related protein-like [Vitis vinifera]
          Length = 238

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 40/58 (68%), Positives = 47/58 (81%)
 Frame = +3

Query: 6   LNTLPLFPQVAHVVLPAAAYWADKYNQTVCSSAKSGYTVSSYLPLVPIEKIEKVFGGE 179
           LN LPLFPQV  VV+P AAY +++YNQTV S+A+ GY VS+YLPLVP EKI KVFG E
Sbjct: 177 LNRLPLFPQVVQVVVPTAAYCSERYNQTVLSTAEKGYKVSTYLPLVPTEKITKVFGAE 234


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