BLASTX nr result

ID: Coptis25_contig00006200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006200
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147983.1| PREDICTED: probable sodium/metabolite cotran...   123   2e-36
ref|XP_004159525.1| PREDICTED: probable sodium/metabolite cotran...   123   2e-36
ref|XP_002274965.2| PREDICTED: uncharacterized sodium-dependent ...   119   2e-34
emb|CAN76453.1| hypothetical protein VITISV_011475 [Vitis vinifera]   117   4e-34
ref|XP_002509642.1| sodium-bile acid cotransporter, putative [Ri...   115   5e-34

>ref|XP_004147983.1| PREDICTED: probable sodium/metabolite cotransporter BASS6,
            chloroplastic-like [Cucumis sativus]
          Length = 420

 Score =  123 bits (309), Expect(2) = 2e-36
 Identities = 60/91 (65%), Positives = 73/91 (80%)
 Frame = -1

Query: 1427 RFFPWICDAIRPLLPALSVVVTALCVGSPLAINIEAVMSPFGLTXXXXXIGFHMTSFISG 1248
            RFFP IC+AIRP LP LSV+VTA CVG+PLAINI AV+SPFGL+     + FH+++FI+G
Sbjct: 281  RFFPRICEAIRPFLPPLSVLVTACCVGAPLAININAVISPFGLSILLLIVAFHLSAFIAG 340

Query: 1247 YFLTGLAFRNASDVKPLQRTLSYETGLTISI 1155
            Y LTGLAF  + DVK LQRTLSYETG+  S+
Sbjct: 341  YSLTGLAFHGSPDVKALQRTLSYETGMQSSL 371



 Score = 57.0 bits (136), Expect(2) = 2e-36
 Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = -3

Query: 1104 GMQSSLLALALANRFFQDPLVGVPPAIS-VSKFLIAFTPNSNWRK 973
            GMQSSLLALALANRFFQDPLV VPPAIS V   L+ F+    W K
Sbjct: 366  GMQSSLLALALANRFFQDPLVSVPPAISTVMMSLMGFSLVMIWSK 410


>ref|XP_004159525.1| PREDICTED: probable sodium/metabolite cotransporter BASS6,
            chloroplastic-like [Cucumis sativus]
          Length = 420

 Score =  123 bits (308), Expect(2) = 2e-36
 Identities = 60/91 (65%), Positives = 73/91 (80%)
 Frame = -1

Query: 1427 RFFPWICDAIRPLLPALSVVVTALCVGSPLAINIEAVMSPFGLTXXXXXIGFHMTSFISG 1248
            RFFP IC+AIRP LP LSV+VTA CVG+PLAINI AV+SPFGL+     + FH+++FI+G
Sbjct: 281  RFFPRICEAIRPFLPPLSVLVTACCVGAPLAININAVISPFGLSILLLIVAFHLSAFIAG 340

Query: 1247 YFLTGLAFRNASDVKPLQRTLSYETGLTISI 1155
            Y LTGLAF  + DVK LQRTLSYETG+  S+
Sbjct: 341  YSLTGLAFHGSPDVKGLQRTLSYETGMQSSL 371



 Score = 57.0 bits (136), Expect(2) = 2e-36
 Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = -3

Query: 1104 GMQSSLLALALANRFFQDPLVGVPPAIS-VSKFLIAFTPNSNWRK 973
            GMQSSLLALALANRFFQDPLV VPPAIS V   L+ F+    W K
Sbjct: 366  GMQSSLLALALANRFFQDPLVSVPPAISTVMMSLMGFSLVMIWSK 410


>ref|XP_002274965.2| PREDICTED: uncharacterized sodium-dependent transporter yocS-like,
            partial [Vitis vinifera]
          Length = 356

 Score =  119 bits (299), Expect(2) = 2e-34
 Identities = 58/91 (63%), Positives = 71/91 (78%)
 Frame = -1

Query: 1427 RFFPWICDAIRPLLPALSVVVTALCVGSPLAINIEAVMSPFGLTXXXXXIGFHMTSFISG 1248
            RF P IC+AIRP LP LSV+VTA CVGSPLAIN+E+V+SPFG+T     I FH T+F++G
Sbjct: 244  RFLPRICNAIRPFLPPLSVLVTACCVGSPLAINVESVLSPFGVTVSMLIIAFHFTAFVAG 303

Query: 1247 YFLTGLAFRNASDVKPLQRTLSYETGLTISI 1155
            Y L+GL F  A DVK LQRTLS+ETG+  S+
Sbjct: 304  YGLSGLVFHEAPDVKALQRTLSFETGMQSSL 334



 Score = 54.3 bits (129), Expect(2) = 2e-34
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -3

Query: 1104 GMQSSLLALALANRFFQDPLVGVPPAIS 1021
            GMQSSLLALALANRFFQD LVGVPPAIS
Sbjct: 329  GMQSSLLALALANRFFQDSLVGVPPAIS 356


>emb|CAN76453.1| hypothetical protein VITISV_011475 [Vitis vinifera]
          Length = 352

 Score =  117 bits (292), Expect(2) = 4e-34
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -1

Query: 1424 FFPWICDAIRPLLPALSVVVTALCVGSPLAINIEAVMSPFGLTXXXXXIGFHMTSFISGY 1245
            F P IC+AIRP LP LSV+VTA CVGSPLAIN+E+V+SPFG+T     I FH T+F++GY
Sbjct: 195  FLPRICNAIRPFLPPLSVLVTACCVGSPLAINVESVLSPFGVTVSMLIIAFHFTAFVAGY 254

Query: 1244 FLTGLAFRNASDVKPLQRTLSYETGLTISI 1155
             L+GL F  A DVK +QRTLS+ETG+  S+
Sbjct: 255  GLSGLVFHEAPDVKAIQRTLSFETGMQSSL 284



 Score = 55.8 bits (133), Expect(2) = 4e-34
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 1104 GMQSSLLALALANRFFQDPLVGVPPAISV 1018
            GMQSSLLALALANRFFQD LVGVPPAISV
Sbjct: 279  GMQSSLLALALANRFFQDSLVGVPPAISV 307


>ref|XP_002509642.1| sodium-bile acid cotransporter, putative [Ricinus communis]
            gi|223549541|gb|EEF51029.1| sodium-bile acid
            cotransporter, putative [Ricinus communis]
          Length = 413

 Score =  115 bits (288), Expect(2) = 5e-34
 Identities = 54/91 (59%), Positives = 70/91 (76%)
 Frame = -1

Query: 1427 RFFPWICDAIRPLLPALSVVVTALCVGSPLAINIEAVMSPFGLTXXXXXIGFHMTSFISG 1248
            RF PWI +AIRP LP LSV+VTA CVG+PLAIN+++V+SPFG T     I FH+ +F++G
Sbjct: 280  RFLPWISNAIRPFLPPLSVLVTACCVGAPLAINVKSVISPFGATILSLIISFHLLAFVAG 339

Query: 1247 YFLTGLAFRNASDVKPLQRTLSYETGLTISI 1155
            Y LTGL F  A D+K LQRT+S+ETG+  S+
Sbjct: 340  YVLTGLVFPKAPDLKALQRTMSFETGMQSSL 370



 Score = 57.0 bits (136), Expect(2) = 5e-34
 Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = -3

Query: 1104 GMQSSLLALALANRFFQDPLVGVPPAIS-VSKFLIAFTPNSNWRK 973
            GMQSSLLALALANRFF+DPLV VPPAIS V   L+ FT    W K
Sbjct: 365  GMQSSLLALALANRFFRDPLVAVPPAISTVMMSLMGFTLVMVWAK 409


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