BLASTX nr result
ID: Coptis25_contig00006195
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006195 (720 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis... 121 2e-25 ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arab... 120 4e-25 ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana] g... 120 4e-25 ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265... 118 1e-24 emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera] 118 1e-24 >ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera] Length = 217 Score = 121 bits (303), Expect = 2e-25 Identities = 61/62 (98%), Positives = 61/62 (98%) Frame = -1 Query: 720 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGNKDDVSAVKKV 541 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVG KDDVSAVKKV Sbjct: 153 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGTKDDVSAVKKV 212 Query: 540 GC 535 GC Sbjct: 213 GC 214 >ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp. lyrata] gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp. lyrata] Length = 217 Score = 120 bits (300), Expect = 4e-25 Identities = 60/62 (96%), Positives = 62/62 (100%) Frame = -1 Query: 720 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGNKDDVSAVKKV 541 METSALESMNVENAFTEVL+QIYRVVSRKALDIGDDPAALPKGQTINVG+KDDVSAVKKV Sbjct: 153 METSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDDVSAVKKV 212 Query: 540 GC 535 GC Sbjct: 213 GC 214 >ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana] gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana] gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana] Length = 217 Score = 120 bits (300), Expect = 4e-25 Identities = 60/62 (96%), Positives = 62/62 (100%) Frame = -1 Query: 720 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGNKDDVSAVKKV 541 METSALESMNVENAFTEVL+QIYRVVSRKALDIGDDPAALPKGQTINVG+KDDVSAVKKV Sbjct: 153 METSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDDVSAVKKV 212 Query: 540 GC 535 GC Sbjct: 213 GC 214 >ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera] Length = 715 Score = 118 bits (295), Expect = 1e-24 Identities = 59/62 (95%), Positives = 60/62 (96%) Frame = -1 Query: 720 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGNKDDVSAVKKV 541 METSALESMNVENAFTEVLTQIY+VVSRKALDIGDDPAALPKGQTINVG KDDVSAVKK Sbjct: 651 METSALESMNVENAFTEVLTQIYQVVSRKALDIGDDPAALPKGQTINVGTKDDVSAVKKA 710 Query: 540 GC 535 GC Sbjct: 711 GC 712 >emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera] Length = 217 Score = 118 bits (295), Expect = 1e-24 Identities = 59/62 (95%), Positives = 60/62 (96%) Frame = -1 Query: 720 METSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAALPKGQTINVGNKDDVSAVKKV 541 METSALESMNVENAFTEVLTQIY+VVSRKALDIGDDPAALPKGQTINVG KDDVSAVKK Sbjct: 153 METSALESMNVENAFTEVLTQIYQVVSRKALDIGDDPAALPKGQTINVGTKDDVSAVKKA 212 Query: 540 GC 535 GC Sbjct: 213 GC 214