BLASTX nr result

ID: Coptis25_contig00006178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006178
         (2665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19510.3| unnamed protein product [Vitis vinifera]              209   3e-51
ref|XP_002282801.1| PREDICTED: uncharacterized protein LOC100262...   209   3e-51
ref|XP_004141260.1| PREDICTED: uncharacterized protein LOC101215...   190   2e-45
ref|XP_003545314.1| PREDICTED: uncharacterized protein LOC100782...   141   8e-31
gb|ABD32580.1| SAM (and some other nucleotide) binding motif; WW...   140   1e-30

>emb|CBI19510.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  209 bits (532), Expect = 3e-51
 Identities = 150/434 (34%), Positives = 222/434 (51%), Gaps = 9/434 (2%)
 Frame = +3

Query: 825  VDKQLVGHRTSEDSLVGYYCDSDSE--CIDITTEEPCIPDSSIYSQCSITTDLILKEEYD 998
            VD +LV     + SLV  + D+  E  C DI+ E+  +P+  + SQ S   ++I  +  D
Sbjct: 152  VDGRLVEFEHLDGSLVACH-DAQGEKICDDISIEQLGVPNLVLPSQSS---EVIDHDGID 207

Query: 999  NCKPCREYGDWRTFWDAFYMRTYFYNTKTHESTWDPPPGVDFV------SFSEEEPQPSD 1160
            +C+    +GDWR +WD+FYMR YFYN KTHESTW  PPG++F+       FSE  P+   
Sbjct: 208  SCESYGGFGDWRVYWDSFYMRNYFYNIKTHESTWFQPPGMEFLLGDITNEFSEIIPEQDY 267

Query: 1161 MIVDAADKGIISGSPSAEVLDPCDLQDKSHLFQEATSSNNSSGNLTHVTSSRIEPDASNE 1340
            M                + +D C LQ+   +F  +   +  +G  ++  S  IE DA   
Sbjct: 268  M----------------KAVDACGLQN---IFVVSNPGDEVAGQPSNEHSVGIELDAEKS 308

Query: 1341 ICGKDTIFNSLRAEVLCPCDLQDKSQLFQDATSSDNSLGHASPESSSRVEPDTGNVTPGI 1520
            +       +S+    +  C LQ+ ++   D   S          S S      G++   +
Sbjct: 309  M-------SSMTMPDVSSCSLQEINRNCNDKIPS-------CILSESDTHKCIGSLGKKL 354

Query: 1521 QLISEEDWREDQKDGCMNSKTFELDSYEHFHELQMDFFSEKARIVCDTSKNHDSDACRLT 1700
            + +  ++         + ++T E+D  E     +M    E    +C    N  ++A    
Sbjct: 355  EQLDYDEVCSSDLQFMLTNRTDEMDYSEPKDGTKMIVACEG---MCKNLTNAPTEA---- 407

Query: 1701 SITKVSEDAK-DIQLGYIAPAIDELERQQDPVPSKNKKKKLRRARMRSRQYDYKAEFHFE 1877
                V E    ++  GYI  AIDEL+   + V +K +KKK+RR R   +  +    F F+
Sbjct: 408  ----VFESWNCNMHPGYIVSAIDELDITHNSVTTK-QKKKVRRMRPWKKLSNENEGFEFQ 462

Query: 1878 EMPQEFPHGITKYWCQRYSLFSKFDDGIKMDEEGWFSVTPEPIARHHATRCGGGTVVDSF 2057
             + ++    I+KYW QRY LFSK+DDGIKMD+EGWFSVTPE IARHHA+RCG G +VD F
Sbjct: 463  GLLEDSSADISKYWWQRYLLFSKYDDGIKMDKEGWFSVTPEIIARHHASRCGSGIIVDCF 522

Query: 2058 TGVGGNAIQLAKRN 2099
            TGVGGNAIQ A+R+
Sbjct: 523  TGVGGNAIQFAQRS 536



 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 20/100 (20%)
 Frame = +1

Query: 40  VEPENEAIKALGSLFKLTQVYLWDDDFVEQAEVSS-------------------SFANKN 162
           +E +  AI ALGSLF+LTQV LWDD   E  EVSS                     +  N
Sbjct: 1   METQAPAITALGSLFRLTQVSLWDDASAEVPEVSSFSRRSKPSAGDEEDEGNSDIISAAN 60

Query: 163 FHHLALEEIELSQQMKEFGLPVSFVTSK-KESVLTKAKRK 279
            ++ + E +EL+++M   GLP+SF T+K K + + K KRK
Sbjct: 61  DYNPSQEYVELAKEMNALGLPISFHTNKEKRNAVVKGKRK 100


>ref|XP_002282801.1| PREDICTED: uncharacterized protein LOC100262697 [Vitis vinifera]
          Length = 780

 Score =  209 bits (532), Expect = 3e-51
 Identities = 150/434 (34%), Positives = 222/434 (51%), Gaps = 9/434 (2%)
 Frame = +3

Query: 825  VDKQLVGHRTSEDSLVGYYCDSDSE--CIDITTEEPCIPDSSIYSQCSITTDLILKEEYD 998
            VD +LV     + SLV  + D+  E  C DI+ E+  +P+  + SQ S   ++I  +  D
Sbjct: 249  VDGRLVEFEHLDGSLVACH-DAQGEKICDDISIEQLGVPNLVLPSQSS---EVIDHDGID 304

Query: 999  NCKPCREYGDWRTFWDAFYMRTYFYNTKTHESTWDPPPGVDFV------SFSEEEPQPSD 1160
            +C+    +GDWR +WD+FYMR YFYN KTHESTW  PPG++F+       FSE  P+   
Sbjct: 305  SCESYGGFGDWRVYWDSFYMRNYFYNIKTHESTWFQPPGMEFLLGDITNEFSEIIPEQDY 364

Query: 1161 MIVDAADKGIISGSPSAEVLDPCDLQDKSHLFQEATSSNNSSGNLTHVTSSRIEPDASNE 1340
            M                + +D C LQ+   +F  +   +  +G  ++  S  IE DA   
Sbjct: 365  M----------------KAVDACGLQN---IFVVSNPGDEVAGQPSNEHSVGIELDAEKS 405

Query: 1341 ICGKDTIFNSLRAEVLCPCDLQDKSQLFQDATSSDNSLGHASPESSSRVEPDTGNVTPGI 1520
            +       +S+    +  C LQ+ ++   D   S          S S      G++   +
Sbjct: 406  M-------SSMTMPDVSSCSLQEINRNCNDKIPS-------CILSESDTHKCIGSLGKKL 451

Query: 1521 QLISEEDWREDQKDGCMNSKTFELDSYEHFHELQMDFFSEKARIVCDTSKNHDSDACRLT 1700
            + +  ++         + ++T E+D  E     +M    E    +C    N  ++A    
Sbjct: 452  EQLDYDEVCSSDLQFMLTNRTDEMDYSEPKDGTKMIVACEG---MCKNLTNAPTEA---- 504

Query: 1701 SITKVSEDAK-DIQLGYIAPAIDELERQQDPVPSKNKKKKLRRARMRSRQYDYKAEFHFE 1877
                V E    ++  GYI  AIDEL+   + V +K +KKK+RR R   +  +    F F+
Sbjct: 505  ----VFESWNCNMHPGYIVSAIDELDITHNSVTTK-QKKKVRRMRPWKKLSNENEGFEFQ 559

Query: 1878 EMPQEFPHGITKYWCQRYSLFSKFDDGIKMDEEGWFSVTPEPIARHHATRCGGGTVVDSF 2057
             + ++    I+KYW QRY LFSK+DDGIKMD+EGWFSVTPE IARHHA+RCG G +VD F
Sbjct: 560  GLLEDSSADISKYWWQRYLLFSKYDDGIKMDKEGWFSVTPEIIARHHASRCGSGIIVDCF 619

Query: 2058 TGVGGNAIQLAKRN 2099
            TGVGGNAIQ A+R+
Sbjct: 620  TGVGGNAIQFAQRS 633



 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 20/100 (20%)
 Frame = +1

Query: 40  VEPENEAIKALGSLFKLTQVYLWDDDFVEQAEVSS-------------------SFANKN 162
           +E +  AI ALGSLF+LTQV LWDD   E  EVSS                     +  N
Sbjct: 1   METQAPAITALGSLFRLTQVSLWDDASAEVPEVSSFSRRSKPSAGDEEDEGNSDIISAAN 60

Query: 163 FHHLALEEIELSQQMKEFGLPVSFVTSK-KESVLTKAKRK 279
            ++ + E +EL+++M   GLP+SF T+K K + + K KRK
Sbjct: 61  DYNPSQEYVELAKEMNALGLPISFHTNKEKRNAVVKGKRK 100


>ref|XP_004141260.1| PREDICTED: uncharacterized protein LOC101215034 [Cucumis sativus]
            gi|449519340|ref|XP_004166693.1| PREDICTED:
            uncharacterized protein LOC101228946 [Cucumis sativus]
          Length = 789

 Score =  190 bits (482), Expect = 2e-45
 Identities = 134/422 (31%), Positives = 189/422 (44%), Gaps = 18/422 (4%)
 Frame = +3

Query: 885  DSDSECIDITTEEPCIPDSSIYSQCSITTDLILKEEYDNCKPC-REYGDWRTFWDAFYMR 1061
            D+DS  +     EPC     +   C+         E D    C  E GDW  +WD+FYMR
Sbjct: 279  DTDSGIVLPEVAEPCF--LRMEPDCN---------ENDQVVGCIHESGDWMVYWDSFYMR 327

Query: 1062 TYFYNTKTHESTWDPPPGVDFVSFSEEEPQPSDMIVDAADKGIISGSPSAEVLDPCD--- 1232
             YFYN K+HESTW+PP G++  + S+    P++   +  +  ++    S ++        
Sbjct: 328  NYFYNIKSHESTWNPPLGLEHFASSDANFTPNESTAEVCEMDVLEDVKSEDICRVLGDTE 387

Query: 1233 ----LQDKSHLFQEATSSNNSSGNLTHVTSSRIEPDASNEICGKDT------IFNSLRAE 1382
                L D  H          SS  +  + SS     + N  C KD          + R  
Sbjct: 388  CMNLLGDSVHCQPPDALLEGSSSLIEGIESSAFIDTSIN--CSKDEPQEWLMSCRNTREN 445

Query: 1383 VLCPCDLQDKSQLFQDATSSDNSLGHASPESSSRVEPDTGNVTPGIQLISEEDWREDQKD 1562
            + C C+                  GHA             N T G Q I+         +
Sbjct: 446  IGCSCE------------------GHAKQSCGE-------NCTNGSQFIAA--------N 472

Query: 1563 GCMNSKTFELDSYEHFHELQMDFFSEKARIVCDTSKNHDSDACRLTS-ITKVSEDAKDIQ 1739
            G      F      + H  ++D         C T  + +  A   TS ++ + + A  I 
Sbjct: 473  GASEQMMFSHHKPSNMHSPEID---------CITIDDDEGTAGLTTSSVSHMLQQADHID 523

Query: 1740 LGYI---APAIDELERQQDPVPSKNKKKKLRRARMRSRQYDYKAEFHFEEMPQEFPHGIT 1910
                    P I  L   Q+ +  +N+K+K++R R R +  D    F    + +E+P  IT
Sbjct: 524  GDMHFANGPIICTLGTVQN-LSVRNRKRKMKRTRRRGQLSDRNEGFRSFAITEEYPTSIT 582

Query: 1911 KYWCQRYSLFSKFDDGIKMDEEGWFSVTPEPIARHHATRCGGGTVVDSFTGVGGNAIQLA 2090
            KYWCQRY LFS+FDDGIKMD+EGWFSVTPEPIARHHA+RCG   ++D FTGVGGNAIQ +
Sbjct: 583  KYWCQRYQLFSRFDDGIKMDKEGWFSVTPEPIARHHASRCGSNMIIDGFTGVGGNAIQFS 642

Query: 2091 KR 2096
            +R
Sbjct: 643  QR 644


>ref|XP_003545314.1| PREDICTED: uncharacterized protein LOC100782129 [Glycine max]
          Length = 707

 Score =  141 bits (356), Expect = 8e-31
 Identities = 64/109 (58%), Positives = 80/109 (73%)
 Frame = +3

Query: 1770 LERQQDPVPSKNKKKKLRRARMRSRQYDYKAEFHFEEMPQEFPHGITKYWCQRYSLFSKF 1949
            L+ + DP  SK  KK  RR R R + Y+   + HF+EMP+ +   + KYWCQRYSLFS+F
Sbjct: 467  LDSKSDPFESKQGKKVKRRQRQR-KLYNEAEDLHFQEMPEVYSAAVGKYWCQRYSLFSRF 525

Query: 1950 DDGIKMDEEGWFSVTPEPIARHHATRCGGGTVVDSFTGVGGNAIQLAKR 2096
            DDG+K+DEEGWFSVTPE IARH A RC  G ++D FTGVGGNAIQ A++
Sbjct: 526  DDGVKLDEEGWFSVTPEVIARHQAIRCASGVIIDGFTGVGGNAIQFAQQ 574



 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
 Frame = +3

Query: 837  LVGHRTSEDSLVGYYCDSDSECIDITTEEPCIPDSSIYSQCSITTDLILKEEYDNCKPCR 1016
            +VG  T  D++  Y  D  + C   + E    P SS   +C         +  D      
Sbjct: 255  IVGKNTDCDTI--YNDDGAATCHPHSIESELHPVSSEGIEC---------DRNDVSNNYA 303

Query: 1017 EYGDWRTFWDAFYMRTYFYNTKTHESTWDPPPGVDFVSFSEEEPQPSDMIVDAADKGIIS 1196
            E+GDW   WD FY RTYFYN +TH STWD P G++ ++            + A+++  I 
Sbjct: 304  EHGDWMVVWDTFYERTYFYNIRTHTSTWDAPSGMEHLATGRYTESDDSKTLKASEEWGIQ 363

Query: 1197 GS--PSAEVLDPCDLQDKSHLFQEATSSNNSSGNLTHVTSSRIEPDASNEICG 1349
             S  P  E L   +L+ K H  +  T S  + GNL    ++  E  + N   G
Sbjct: 364  NSTKPPEETLIEENLEVKQH-EEYLTESGVAVGNLVSDITTHGEDQSLNHSDG 415



 Score = 65.9 bits (159), Expect = 6e-08
 Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
 Frame = +1

Query: 49  ENEAIKALGSLFKLTQVYLWDD-------------DFVEQAEVSSSFANKNFHHLALEEI 189
           E  AI+ALGSLFK+TQV+LWDD             D  +    S          +  E++
Sbjct: 9   EGAAIEALGSLFKVTQVFLWDDGLQVSSSAERWKLDEADDNHGSDPVPADLIDLITPEDL 68

Query: 190 ELSQQMKEFGLPVSFVTSKKESVLTKAKRKGGISEPKPGYGGISIFIGLEEVTEEPVRDV 369
           EL++Q+ E GLP+SF T+K+++   K K+KG + +  P      +   L EV+ E +  V
Sbjct: 69  ELTKQLNELGLPLSFQTNKEKNGPVKGKKKGKLLK-HPNTCHNPVDETLYEVSGEEI--V 125

Query: 370 VPCTLED---------GILGNSENDFLQSSLE 438
            P    D          +LG SE+ FL+ +++
Sbjct: 126 SPAKFHDKTSSPLSCISMLGQSESSFLEGAMD 157


>gb|ABD32580.1| SAM (and some other nucleotide) binding motif; WW/Rsp5/WWP [Medicago
            truncatula]
          Length = 681

 Score =  140 bits (354), Expect = 1e-30
 Identities = 80/234 (34%), Positives = 117/234 (50%)
 Frame = +3

Query: 1395 CDLQDKSQLFQDATSSDNSLGHASPESSSRVEPDTGNVTPGIQLISEEDWREDQKDGCMN 1574
            C+ Q   +  ++    +N  G+   E S+ +    GN+   I   SE+ +     D    
Sbjct: 320  CETQSSIKQPEETLVDENLSGNQHEEYSAEIGVAAGNLVSDIATNSEDQFLHHPSD---- 375

Query: 1575 SKTFELDSYEHFHELQMDFFSEKARIVCDTSKNHDSDACRLTSITKVSEDAKDIQLGYIA 1754
                     E+      +    +    C  S   D         ++ + +       Y+ 
Sbjct: 376  ---------ENLERTSCNGGVSR----CSVSNTLDHVVSSNNKCSQATSEVDHTPTEYMV 422

Query: 1755 PAIDELERQQDPVPSKNKKKKLRRARMRSRQYDYKAEFHFEEMPQEFPHGITKYWCQRYS 1934
                EL+ + DP  SK +KK  R+ R +   Y+ + +  F++MP+ +   I KYWCQRY 
Sbjct: 423  IDTLELDSKSDPFMSKQEKKVKRKHRRKKLYYETE-DLEFQKMPEAYSATIEKYWCQRYI 481

Query: 1935 LFSKFDDGIKMDEEGWFSVTPEPIARHHATRCGGGTVVDSFTGVGGNAIQLAKR 2096
            LFS+FDDG+KMDEEGWFSVTPE IA H A+RC GGT++D FTG GGNAIQ A+R
Sbjct: 482  LFSRFDDGVKMDEEGWFSVTPEIIAHHQASRCAGGTLIDCFTGAGGNAIQFAQR 535



 Score = 69.3 bits (168), Expect = 5e-09
 Identities = 38/117 (32%), Positives = 50/117 (42%)
 Frame = +3

Query: 987  EEYDNCKPCREYGDWRTFWDAFYMRTYFYNTKTHESTWDPPPGVDFVSFSEEEPQPSDMI 1166
            +  D    C  +GDW   WD FY R YFYN KT  STWDPPPG++ ++F           
Sbjct: 254  DRVDGSNDCGVFGDWMVLWDTFYGRRYFYNVKTDTSTWDPPPGMEHLAFGG--------C 305

Query: 1167 VDAADKGIISGSPSAEVLDPCDLQDKSHLFQEATSSNNSSGNLTHVTSSRIEPDASN 1337
             +  D   +  S      + C+ Q      +E     N SGN     S+ I   A N
Sbjct: 306  TELDDSETLKSS------EECETQSSIKQPEETLVDENLSGNQHEEYSAEIGVAAGN 356


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