BLASTX nr result

ID: Coptis25_contig00006176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006176
         (1848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285267.1| PREDICTED: glutamate decarboxylase 1 [Vitis ...   805   0.0  
ref|XP_002528515.1| glutamate decarboxylase, putative [Ricinus c...   795   0.0  
ref|XP_002871761.1| hypothetical protein ARALYDRAFT_488599 [Arab...   788   0.0  
dbj|BAF80895.1| glutamate decarboxylase [Glycine max]                 786   0.0  
gb|AAZ05070.1| glutamate decarboxylase [Citrus sinensis]              790   0.0  

>ref|XP_002285267.1| PREDICTED: glutamate decarboxylase 1 [Vitis vinifera]
          Length = 495

 Score =  805 bits (2078), Expect(2) = 0.0
 Identities = 399/453 (88%), Positives = 420/453 (92%)
 Frame = -1

Query: 1581 ELMLDGNPRLNLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLF 1402
            ELMLDGNPRLNLASFVTTWMEPECDKLMM++INKNYVDMDEYPVTTELQNRCVN+IAHLF
Sbjct: 49   ELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIAHLF 108

Query: 1401 NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWE 1222
            NAPL DSE AVGVGTVGSSEAIMLAGLAFKRKWQNKR+AEGKP DKPNIVTGANVQVCWE
Sbjct: 109  NAPLEDSEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWE 168

Query: 1221 KFARYFEVELKEVKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 1042
            KFARYFEVELKEVKLRD YYVMDP KAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL
Sbjct: 169  KFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 228

Query: 1041 VEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 862
            VEKNK+TGWDTPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV
Sbjct: 229  VEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288

Query: 861  IWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR 682
            +WRSKEDLP+ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGYRN+MENC+
Sbjct: 289  VWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCQ 348

Query: 681  ENAMVLRKGLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMP 502
            ENAM L++GLEKTGRFNI+SKD GVPLVAFSLKD+S HDEFEVADMLRRFGWIVPAYTMP
Sbjct: 349  ENAMALKEGLEKTGRFNIISKDNGVPLVAFSLKDNSCHDEFEVADMLRRFGWIVPAYTMP 408

Query: 501  ADAQHVTVLRVVIREDFSHTLAERLVNDIEKVLLELDHHPAKIQAVTSAAIFSDEKIGGN 322
             DAQHVTVLRVV+REDFS TLAERLV DI KVL ELD  PAK+ A  S      E+   N
Sbjct: 409  PDAQHVTVLRVVVREDFSRTLAERLVFDITKVLHELDMLPAKLSAKISV-----EEKKQN 463

Query: 321  GTTVKKTALETQREITDAWKKFVMDRKKTTKVC 223
            GT +KK+ +ETQREITDAWKKFVM  KKT  VC
Sbjct: 464  GTILKKSVIETQREITDAWKKFVM-AKKTNGVC 495



 Score = 48.1 bits (113), Expect(2) = 0.0
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = -2

Query: 1745 MVLSKAASESDVSIHSTFASRYVRTSL 1665
            MVLSK ASESDVS+HSTFASRYV+ SL
Sbjct: 1    MVLSKTASESDVSVHSTFASRYVKASL 27


>ref|XP_002528515.1| glutamate decarboxylase, putative [Ricinus communis]
            gi|223532075|gb|EEF33884.1| glutamate decarboxylase,
            putative [Ricinus communis]
          Length = 498

 Score =  795 bits (2052), Expect(2) = 0.0
 Identities = 393/454 (86%), Positives = 419/454 (92%), Gaps = 1/454 (0%)
 Frame = -1

Query: 1581 ELMLDGNPRLNLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLF 1402
            ELMLDGNPRLNLASFVTTWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNMIAHLF
Sbjct: 49   ELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLF 108

Query: 1401 NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWE 1222
            NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR+AEGKP DKPNIVTGANVQVCWE
Sbjct: 109  NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWE 168

Query: 1221 KFARYFEVELKEVKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 1042
            KFARYFEVELKEVKLRD YYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL
Sbjct: 169  KFARYFEVELKEVKLRDGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 228

Query: 1041 VEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 862
             EKNK+TGWDTPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV
Sbjct: 229  TEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288

Query: 861  IWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR 682
            IWR+K+DLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR
Sbjct: 289  IWRNKDDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR 348

Query: 681  ENAMVLRKGLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMP 502
            +N +VL+ GLEKTGRF IVSKD GVPLVAFSLKD+S H+EFE++++LRRFGWIVPAYTMP
Sbjct: 349  DNMLVLKDGLEKTGRFTIVSKDNGVPLVAFSLKDNSSHNEFEISELLRRFGWIVPAYTMP 408

Query: 501  ADAQHVTVLRVVIREDFSHTLAERLVNDIEKVLLELDHHPAKIQAVTSAAIFSDEKIGGN 322
             DAQHVTVLRVVIREDFS T AERLV DIEKVL ELD  P++++    A +   EK   N
Sbjct: 409  PDAQHVTVLRVVIREDFSRTFAERLVLDIEKVLHELDTLPSRLRE-KIAIVEEKEK---N 464

Query: 321  GT-TVKKTALETQREITDAWKKFVMDRKKTTKVC 223
            GT   KK+ +ETQREIT  WKKFV+++KK   VC
Sbjct: 465  GTKAAKKSVIETQREITTIWKKFVLEKKKMNGVC 498



 Score = 49.3 bits (116), Expect(2) = 0.0
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 1745 MVLSKAASESDVSIHSTFASRYVRTSL 1665
            MVLSK ASESDVS+HSTFASRYVR SL
Sbjct: 1    MVLSKTASESDVSVHSTFASRYVRASL 27


>ref|XP_002871761.1| hypothetical protein ARALYDRAFT_488599 [Arabidopsis lyrata subsp.
            lyrata] gi|297317598|gb|EFH48020.1| hypothetical protein
            ARALYDRAFT_488599 [Arabidopsis lyrata subsp. lyrata]
          Length = 502

 Score =  788 bits (2036), Expect(2) = 0.0
 Identities = 389/454 (85%), Positives = 416/454 (91%), Gaps = 1/454 (0%)
 Frame = -1

Query: 1581 ELMLDGNPRLNLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLF 1402
            ELMLDGNPRLNLASFVTTWMEPECDKL+MSSINKNYVDMDEYPVTTELQNRCVNMIAHLF
Sbjct: 49   ELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLF 108

Query: 1401 NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWE 1222
            NAPLG++ETAVGVGTVGSSEAIMLAGLAFKRKWQNKR+AEGKPVDKPNIVTGANVQVCWE
Sbjct: 109  NAPLGETETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE 168

Query: 1221 KFARYFEVELKEVKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 1042
            KFARYFEVELKEVKL + YYVMDP KAV+MVDENTICVAAILGSTLNGEFEDVKLLNDLL
Sbjct: 169  KFARYFEVELKEVKLSEGYYVMDPQKAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLL 228

Query: 1041 VEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 862
            VEKNKETGWDTPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV
Sbjct: 229  VEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288

Query: 861  IWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR 682
            IWR+KEDLP+ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGY N+MENCR
Sbjct: 289  IWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYTNVMENCR 348

Query: 681  ENAMVLRKGLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMP 502
            EN +VLRKGLEKT RFNIVSKDEGVPLVAFSLKD+S H EFE++DMLRR+GWIVPAYTMP
Sbjct: 349  ENMIVLRKGLEKTERFNIVSKDEGVPLVAFSLKDNSSHTEFEISDMLRRYGWIVPAYTMP 408

Query: 501  ADAQHVTVLRVVIREDFSHTLAERLVNDIEKVLLELDHHPAKIQAVTSAAIFSDEKIGGN 322
             +AQH+TVLRVVIREDFS TLAERLV DIEKV+ ELD  P+++    S      E    N
Sbjct: 409  PNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVIHKISLGQEKSEANSDN 468

Query: 321  -GTTVKKTALETQREITDAWKKFVMDRKKTTKVC 223
               TVKK+ +E QR+I   WKKFV DRKKT+ +C
Sbjct: 469  VMVTVKKSDVEKQRDIIIGWKKFVADRKKTSGIC 502



 Score = 50.4 bits (119), Expect(2) = 0.0
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = -2

Query: 1745 MVLSKAASESDVSIHSTFASRYVRTSL 1665
            MVLS AASESDVS+HSTFASRYVRTSL
Sbjct: 1    MVLSHAASESDVSVHSTFASRYVRTSL 27


>dbj|BAF80895.1| glutamate decarboxylase [Glycine max]
          Length = 503

 Score =  786 bits (2029), Expect(2) = 0.0
 Identities = 381/448 (85%), Positives = 415/448 (92%)
 Frame = -1

Query: 1581 ELMLDGNPRLNLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLF 1402
            ELMLDGNPRLNLASFVTTWMEPECDKL+M++INKNYVDMDEYPVTTELQNRCVNMIAHLF
Sbjct: 49   ELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLF 108

Query: 1401 NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWE 1222
            NAPL ++E AVGVGTVGSSEAIMLAGLAFKRKWQN+R+ EGKP DKPNIVTGANVQVCWE
Sbjct: 109  NAPLEETEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKQEGKPFDKPNIVTGANVQVCWE 168

Query: 1221 KFARYFEVELKEVKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 1042
            KFARYFEVELKEVKLRDDYYVMDP KAVE+VDENTICVAAILGSTLNGEFEDVK LNDLL
Sbjct: 169  KFARYFEVELKEVKLRDDYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLL 228

Query: 1041 VEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 862
            +EKNK TGWDTPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV
Sbjct: 229  IEKNKITGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288

Query: 861  IWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR 682
            IWRSKEDLP+ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGYRN+MENCR
Sbjct: 289  IWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCR 348

Query: 681  ENAMVLRKGLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMP 502
            +N +VL++GLEKTGRF+IVSKD GVPLVAF+LKDH+  DEF+++D LRRFGWIVPAYTMP
Sbjct: 349  DNMLVLKEGLEKTGRFSIVSKDNGVPLVAFTLKDHTHFDEFQISDFLRRFGWIVPAYTMP 408

Query: 501  ADAQHVTVLRVVIREDFSHTLAERLVNDIEKVLLELDHHPAKIQAVTSAAIFSDEKIGGN 322
             DAQHVTVLRVVIREDFS TLAERLV D+EKVL ELD  PA++ + TS  + ++E   G 
Sbjct: 409  PDAQHVTVLRVVIREDFSRTLAERLVADVEKVLHELDSLPARVISSTSVTVTAEE--NGK 466

Query: 321  GTTVKKTALETQREITDAWKKFVMDRKK 238
                KK+A+ETQREIT  WKKFV++RKK
Sbjct: 467  VVVAKKSAMETQREITAIWKKFVLERKK 494



 Score = 49.7 bits (117), Expect(2) = 0.0
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 1745 MVLSKAASESDVSIHSTFASRYVRTSL 1665
            MVLSK  SESDVS+HSTFASRYVRTSL
Sbjct: 1    MVLSKTTSESDVSVHSTFASRYVRTSL 27


>gb|AAZ05070.1| glutamate decarboxylase [Citrus sinensis]
          Length = 494

 Score =  790 bits (2039), Expect(2) = 0.0
 Identities = 390/451 (86%), Positives = 414/451 (91%)
 Frame = -1

Query: 1581 ELMLDGNPRLNLASFVTTWMEPECDKLMMSSINKNYVDMDEYPVTTELQNRCVNMIAHLF 1402
            ELMLDGNPRLNLASFVTTWMEPECDKLMM++INKNYVDMDEYPVTTELQNRCVN+IA LF
Sbjct: 49   ELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLF 108

Query: 1401 NAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRRAEGKPVDKPNIVTGANVQVCWE 1222
            NAPL DSETAVGVGTVGSSEAIMLAGLAFKRKWQNKR+AEGKP DKPNIVTGANVQVCWE
Sbjct: 109  NAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWE 168

Query: 1221 KFARYFEVELKEVKLRDDYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 1042
            KFARYFEVELKEVKL + YYVMDP KAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL
Sbjct: 169  KFARYFEVELKEVKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLL 228

Query: 1041 VEKNKETGWDTPIHVDAASGGFIAPFIYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 862
             EKNKETGWDTPIHVDAASGGFIAPF+YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV
Sbjct: 229  TEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288

Query: 861  IWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCR 682
            +WR+KEDLP+ELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG+EGYRN+MENC 
Sbjct: 289  VWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCH 348

Query: 681  ENAMVLRKGLEKTGRFNIVSKDEGVPLVAFSLKDHSRHDEFEVADMLRRFGWIVPAYTMP 502
            ENAMVL++GLEKTGRFNIVSKDEGVPLVAFSLKD+ RHDEFEVA++LRRFGWIVPAYTMP
Sbjct: 349  ENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMP 408

Query: 501  ADAQHVTVLRVVIREDFSHTLAERLVNDIEKVLLELDHHPAKIQAVTSAAIFSDEKIGGN 322
            ADAQH+TVLRVVIREDFS TLAERLV DI KVL ELD  P+K+    S      E+ G N
Sbjct: 409  ADAQHITVLRVVIREDFSRTLAERLVLDITKVLHELDSLPSKVLVPAS------EQNGRN 462

Query: 321  GTTVKKTALETQREITDAWKKFVMDRKKTTK 229
            G   KKT +ETQRE+T  W+KFV +RK   K
Sbjct: 463  G---KKTEIETQREVTTYWRKFVSERKANNK 490



 Score = 45.1 bits (105), Expect(2) = 0.0
 Identities = 23/27 (85%), Positives = 23/27 (85%)
 Frame = -2

Query: 1745 MVLSKAASESDVSIHSTFASRYVRTSL 1665
            MVLSK  SESD SIHSTFASRYVR SL
Sbjct: 1    MVLSKTFSESDESIHSTFASRYVRNSL 27


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