BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006171
         (1417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   216   1e-53
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   199   2e-48
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       178   3e-42
ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus co...   171   6e-40
gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| hi...   163   1e-37

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  216 bits (550), Expect = 1e-53
 Identities = 128/309 (41%), Positives = 165/309 (53%), Gaps = 9/309 (2%)
 Frame = +2

Query: 203  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 382
            MEFWG+E                L LS A LGE KK KG+    +FL ++ QKLV+GT+ 
Sbjct: 1    MEFWGVEVKAGESFKVKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLL 60

Query: 383  HEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSLMSDGSYEXXXXXXXXXXXXXPVAA 559
                PQ+S+++   K+FELSH+WKNGS++F GYKS++ D   E             PV A
Sbjct: 61   PANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLPDEE-EFSEFDDSDSEEDLPVNA 119

Query: 560  TENGKPEPKNEKSNI------STQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXX 721
             ENGKPEPK E++        + + K+ + EP K                          
Sbjct: 120  IENGKPEPKVEQAKAVPTNANAGKAKVKVEEPPKDAKDEEDDDDDSDEDMVDEDSDEDSD 179

Query: 722  XQIDLSGVXXXXXXXXXXXXXXXXXXXXXXTPKKVL--GTKRPAQSASKTPIPEKKAKRL 895
              I                           TPKK +  G KRP +SA+KTP+P KKAK +
Sbjct: 180  EDI---------MSDAEDGSDEGSESEDEETPKKKVEPGKKRPTESATKTPVPAKKAKLV 230

Query: 896  TPQKTGPEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTA 1075
            +PQKT  +GKK G HTATPHP+KK+GKT  + D  K ++PKS GQ+ CKSCSKTFNS+ A
Sbjct: 231  SPQKT--DGKKGGAHTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENA 288

Query: 1076 LQSHSKAKH 1102
            LQSHSKAKH
Sbjct: 289  LQSHSKAKH 297


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  199 bits (505), Expect = 2e-48
 Identities = 118/314 (37%), Positives = 158/314 (50%), Gaps = 10/314 (3%)
 Frame = +2

Query: 203  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 382
            MEFWG+E                + +S A LGE+KK KG+    ++  +  QKLV+GT+S
Sbjct: 1    MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60

Query: 383  HEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSLMSDGSYEXXXXXXXXXXXXXPVAA 559
             EK PQIS+++   K FELSH+WKNGS+YF GYK+ + D   E                 
Sbjct: 61   AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIPDSDSEFEIDLPHN-------TT 113

Query: 560  TENGKPEP-KNEK--SNISTQIKLT-----IREPNKXXXXXXXXXXXXXXXXXXXXXXXX 715
             +NGKP+  K EK  S  + Q+K+       + P +                        
Sbjct: 114  VDNGKPQQLKQEKPESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDESSEDED 173

Query: 716  XXXQIDLSGVXXXXXXXXXXXXXXXXXXXXXXTPKKV-LGTKRPAQSASKTPIPEKKAKR 892
                   S                        TPKK     KRP +S SKTP+P+KKAK 
Sbjct: 174  MVNDRSASSEDEDDDENEDNEDDKNEISKKKETPKKAGPSKKRPTESVSKTPVPDKKAKF 233

Query: 893  LTPQKTGPEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDT 1072
            +TPQKTG + KK GGH ATP+PSK++GKT  N +  KQ+  KS G   CKSC+++FNS+ 
Sbjct: 234  VTPQKTGDDDKKSGGHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSEN 293

Query: 1073 ALQSHSKAKHSEDK 1114
            ALQSH+KAKH+  K
Sbjct: 294  ALQSHTKAKHTAAK 307


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  178 bits (452), Expect = 3e-42
 Identities = 120/307 (39%), Positives = 153/307 (49%), Gaps = 3/307 (0%)
 Frame = +2

Query: 203  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 382
            MEFWG E                L LS A LGE KK KGS    + + V+ +KL +GT++
Sbjct: 1    MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 383  HEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSLMSDGSYEXXXXXXXXXXXXXPVAA 559
             +K PQ  +++   +DFELSH+WKNGS+YF GYK+      YE             P+  
Sbjct: 61   LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAA---NPYEQEEDEDESDEEI-PLTL 116

Query: 560  TENGKPEPK-NEKSNISTQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDL 736
               GK E K +   + S + K+ I EP+K                             D 
Sbjct: 117  ANTGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDD 176

Query: 737  SGVXXXXXXXXXXXXXXXXXXXXXXTPKKVLGTK-RPAQSASKTPIPEKKAKRLTPQKTG 913
            S                        TPKK   +K RP+ SA KTP P+KKAK  TPQKT 
Sbjct: 177  SD----------------EDQSDEETPKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKT- 219

Query: 914  PEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSK 1093
             +GKK   H ATPHPSK++GKTS N  N   +TPKS G + CK+CS+TF S+TAL+SHSK
Sbjct: 220  -DGKKGAVHVATPHPSKQAGKTSGNKSN---QTPKSGGSLACKTCSRTFGSETALESHSK 275

Query: 1094 AKHSEDK 1114
            AKHS  K
Sbjct: 276  AKHSVGK 282


>ref|XP_002528582.1| Histone deacetylase 2a, putative [Ricinus communis]
            gi|223531978|gb|EEF33790.1| Histone deacetylase 2a,
            putative [Ricinus communis]
          Length = 287

 Score =  171 bits (432), Expect = 6e-40
 Identities = 106/283 (37%), Positives = 147/283 (51%), Gaps = 5/283 (1%)
 Frame = +2

Query: 272  LCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTISHEK-PQISYEMKIPKDFELSHDW 448
            L LS ACLGEVKK KG+    + + +ND+K+V+GT+S EK P +S+++   ++FELSH+W
Sbjct: 39   LHLSQACLGEVKKNKGNEPVFVSVKINDKKIVLGTLSCEKFPHLSFDLIFDQNFELSHNW 98

Query: 449  KNGSIYFTGYKSLMSDGSYEXXXXXXXXXXXXXPVAATENGKPEPKNEKS---NISTQIK 619
            K+GS+YF+                             +E  KP+P+ EK+   +  ++ K
Sbjct: 99   KHGSVYFS-------------------------EKPGSETKKPQPETEKAKPDSTGSKQK 133

Query: 620  LTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDLSGVXXXXXXXXXXXXXXXXXX 799
            + I EP K                           ++   G                   
Sbjct: 134  VKIAEPKKDEKPDNDSDDSTADEDESFDEDDSSDDKVLYDG------EDEDSDESDDSSD 187

Query: 800  XXXXTPKKV-LGTKRPAQSASKTPIPEKKAKRLTPQKTGPEGKKVGGHTATPHPSKKSGK 976
                TPK +  G KRPA+SA KTP+P+KK K +TPQKT  +GKK  GH ATPHPSKK  K
Sbjct: 188  EDEETPKTIEKGKKRPAESAKKTPLPDKKVKLVTPQKT--DGKKASGHVATPHPSKKILK 245

Query: 977  TSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQSHSKAKHS 1105
            T  ++D  K++T KS    PC SC++ F S+ ALQSHSKAKHS
Sbjct: 246  TPASSDQKKEQTQKS---FPCTSCNRAFGSEAALQSHSKAKHS 285


>gb|ACF81501.1| unknown [Zea mays] gi|413950328|gb|AFW82977.1| histone deacetylase
            HDT2 [Zea mays]
          Length = 303

 Score =  163 bits (412), Expect = 1e-37
 Identities = 114/307 (37%), Positives = 146/307 (47%), Gaps = 7/307 (2%)
 Frame = +2

Query: 203  MEFWGIEXXXXXXXXXXXXXXXXLCLSNACLGEVKKTKGSHRAHIFLTVNDQKLVIGTIS 382
            MEFWG+E                L +S A LGE KK   S  A +++ V+D+KL IGT+S
Sbjct: 1    MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKK---SDSALMYVKVDDKKLAIGTLS 57

Query: 383  HEK-PQISYEMKIPKDFELSHDWKNGSIYFTGYKSLMSDGSYEXXXXXXXXXXXXXPVAA 559
             +K PQI +++   K+FELSH  K  S++F+GYK        E                 
Sbjct: 58   IDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEELNIPVI 117

Query: 560  TENGKPEPKNEKSNISTQIKLTIREPNKXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDLS 739
             ENGK + K E+ N    +  T  + +                              D  
Sbjct: 118  KENGKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDSDDSDEDESDDSDEDDSDDSDEG 177

Query: 740  -GVXXXXXXXXXXXXXXXXXXXXXXTP---KKVLGTKRPAQSASKTPIPEKKAKRLTP-- 901
             G+                      TP   K   G KR A++A KTP+ +KKAK  TP  
Sbjct: 178  EGLSPDEGDDDSSDEDDTSDDDEEETPTPKKPEAGKKRGAENALKTPLSDKKAKVATPPA 237

Query: 902  QKTGPEGKKVGGHTATPHPSKKSGKTSINNDNSKQKTPKSSGQIPCKSCSKTFNSDTALQ 1081
            QKTG  GKK   H ATPHP+K  GKT  NND S +K+PKS G +PCKSCSKTFNS+ ALQ
Sbjct: 238  QKTG--GKKGATHVATPHPAK--GKTPANNDKSTEKSPKSGGSVPCKSCSKTFNSEMALQ 293

Query: 1082 SHSKAKH 1102
            +HSKAKH
Sbjct: 294  AHSKAKH 300