BLASTX nr result
ID: Coptis25_contig00006169
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006169
(1770 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147517.1| PREDICTED: LL-diaminopimelate aminotransfera... 495 0.0
ref|XP_003608321.1| LL-diaminopimelate aminotransferase [Medicag... 492 0.0
ref|XP_002522052.1| Transaminase mtnE, putative [Ricinus communi... 496 0.0
ref|XP_002269153.2| PREDICTED: LL-diaminopimelate aminotransfera... 494 0.0
ref|XP_003529277.1| PREDICTED: LL-diaminopimelate aminotransfera... 492 0.0
>ref|XP_004147517.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like
[Cucumis sativus] gi|449520054|ref|XP_004167049.1|
PREDICTED: LL-diaminopimelate aminotransferase,
chloroplastic-like [Cucumis sativus]
Length = 461
Score = 495 bits (1275), Expect(2) = 0.0
Identities = 241/295 (81%), Positives = 269/295 (91%)
Frame = +2
Query: 107 VSIRSSNTSIRKCVATSSTEKTGYKTGVSRNANMAKLQAGYLFPEIARRRAAHMLKYPDA 286
VS+ + CVATS KT +KT VSRN NMAKLQAGYLFPEIARRR AH+LK+PDA
Sbjct: 32 VSLPGKRVGVCMCVATSQDSKTAHKTAVSRNENMAKLQAGYLFPEIARRRNAHLLKFPDA 91
Query: 287 EVIRLGIGDTTEPIPEVITSAMAMKSHALSTLEGYSGYGAEQGDKQVRAALASSFYADLG 466
+VI LGIGDTTEPIP+VITSAMA +SHALSTLEGYSGYGAEQG+K +R+ + +FY+DL
Sbjct: 92 KVISLGIGDTTEPIPDVITSAMAQRSHALSTLEGYSGYGAEQGEKPLRSLIGKTFYSDLD 151
Query: 467 IEESDIFVSDGAKCDISRLQLLFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFQNDVEKYG 646
IEE DIFVSDGAKCDI+RLQL+FGSNV++AVQDPSYPAYVDSSVI+GQTGQ+Q DVEKYG
Sbjct: 152 IEEDDIFVSDGAKCDITRLQLVFGSNVSMAVQDPSYPAYVDSSVILGQTGQYQKDVEKYG 211
Query: 647 NIEYMRCSPENDFFPDLSKVSRTDVIYFCSPNNPTGSAATREQLTRLVQFAKKNGSIIVY 826
NIEYMRC+PEN FFPDLSKV RTD+I+FCSPNNPTGS+A+REQLT+LVQFAKKNGSIIVY
Sbjct: 212 NIEYMRCTPENGFFPDLSKVPRTDIIFFCSPNNPTGSSASREQLTQLVQFAKKNGSIIVY 271
Query: 827 DSAYAMYMSDDNPRSIFEIPGAREVAIETSSFSKYAGFTGVRLGWTVVPKELLFS 991
DSAYAMY+SDDNPRSIFEIPGA+EVAIETSSFSKYAGFTGVRLGWTVVPKELLFS
Sbjct: 272 DSAYAMYISDDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKELLFS 326
Score = 223 bits (567), Expect(2) = 0.0
Identities = 115/169 (68%), Positives = 122/169 (72%)
Frame = +3
Query: 1050 PKELLFSDGFPVAKDFNRIVCTCFNGASNIAQAGGLACLSPEGLKAMRXXXXXXXXXXXX 1229
PKELLFSDGFPVAKDFNRIVCTCFNGASNI+QAGGLACLSPEGL+AM
Sbjct: 320 PKELLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLEAMHG----------- 368
Query: 1230 XXXXXXXXXXXXXXXXVIRFYQENTQIIVDTFKSLGFNVYGGTNAPYVWVHFPGRSSWDV 1409
VI FY+ENT II+DTF SLGFNVYGG NAPYVWVHFPGRSSWDV
Sbjct: 369 ----------------VIGFYKENTSIIMDTFNSLGFNVYGGKNAPYVWVHFPGRSSWDV 412
Query: 1410 FSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRADVLEASKRFKQLYK 1556
F+EILEKTHVVTT IRVSAFGHR +VLEA +RFKQLYK
Sbjct: 413 FAEILEKTHVVTTPGSGFGPAGEGFIRVSAFGHRENVLEACRRFKQLYK 461
>ref|XP_003608321.1| LL-diaminopimelate aminotransferase [Medicago truncatula]
gi|355509376|gb|AES90518.1| LL-diaminopimelate
aminotransferase [Medicago truncatula]
Length = 459
Score = 492 bits (1267), Expect(2) = 0.0
Identities = 243/324 (75%), Positives = 282/324 (87%)
Frame = +2
Query: 20 MAQLLMMNLXXXXXXFLAPNTITTNRVSKVSIRSSNTSIRKCVATSSTEKTGYKTGVSRN 199
+ Q L +++ FL+P++ N S+VS+ + SI KCVAT +T YKT VSRN
Sbjct: 3 ITQNLTISISSSSSSFLSPSSF--NSRSQVSLPVKSVSICKCVATPQEAETAYKTRVSRN 60
Query: 200 ANMAKLQAGYLFPEIARRRAAHMLKYPDAEVIRLGIGDTTEPIPEVITSAMAMKSHALST 379
N+ KLQAGYLFPEIARRR+AH+LKYPDA++I LGIGDTTEPIPEVITSA+A KSHALST
Sbjct: 61 ENLGKLQAGYLFPEIARRRSAHLLKYPDAKIISLGIGDTTEPIPEVITSALAKKSHALST 120
Query: 380 LEGYSGYGAEQGDKQVRAALASSFYADLGIEESDIFVSDGAKCDISRLQLLFGSNVTIAV 559
LEGYSGYGAEQG+K +R+A+AS+FY DLGIE+ DIFVSDGAKCDISRLQ++FGSNV +AV
Sbjct: 121 LEGYSGYGAEQGEKPLRSAIASTFYPDLGIEDDDIFVSDGAKCDISRLQIVFGSNVKMAV 180
Query: 560 QDPSYPAYVDSSVIMGQTGQFQNDVEKYGNIEYMRCSPENDFFPDLSKVSRTDVIYFCSP 739
QDPSYPAYVDSSVIMGQTG +Q DV+K+ NIEYMRC+PEN FFPDLS +SR D+I+FCSP
Sbjct: 181 QDPSYPAYVDSSVIMGQTGLYQKDVQKFANIEYMRCNPENGFFPDLSSLSRPDIIFFCSP 240
Query: 740 NNPTGSAATREQLTRLVQFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAREVAIETSS 919
NNPTG+AATREQL +LVQFAK NGSIIVYDSAYAMY+S DNPRSIFEIPGA+EVAIETSS
Sbjct: 241 NNPTGAAATREQLVQLVQFAKDNGSIIVYDSAYAMYISGDNPRSIFEIPGAKEVAIETSS 300
Query: 920 FSKYAGFTGVRLGWTVVPKELLFS 991
FSKYAGFTGVRLGWTV+PK+LLFS
Sbjct: 301 FSKYAGFTGVRLGWTVIPKQLLFS 324
Score = 219 bits (559), Expect(2) = 0.0
Identities = 113/169 (66%), Positives = 122/169 (72%)
Frame = +3
Query: 1050 PKELLFSDGFPVAKDFNRIVCTCFNGASNIAQAGGLACLSPEGLKAMRXXXXXXXXXXXX 1229
PK+LLFSDGFPVAKDFNRIVCTCFNGASNI+QAGGLACLSPEGLKAMR
Sbjct: 318 PKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRG----------- 366
Query: 1230 XXXXXXXXXXXXXXXXVIRFYQENTQIIVDTFKSLGFNVYGGTNAPYVWVHFPGRSSWDV 1409
VI FY+ENT IIVDTF SLGF VYGG +APYVWVHFPG++SWDV
Sbjct: 367 ----------------VIGFYKENTNIIVDTFDSLGFKVYGGKSAPYVWVHFPGQNSWDV 410
Query: 1410 FSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRADVLEASKRFKQLYK 1556
FSEILEKTHVVTT +RVSAFGHR +VLEA +RFKQLYK
Sbjct: 411 FSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKQLYK 459
>ref|XP_002522052.1| Transaminase mtnE, putative [Ricinus communis]
gi|223538651|gb|EEF40252.1| Transaminase mtnE, putative
[Ricinus communis]
Length = 460
Score = 496 bits (1278), Expect(2) = 0.0
Identities = 253/324 (78%), Positives = 277/324 (85%)
Frame = +2
Query: 20 MAQLLMMNLXXXXXXFLAPNTITTNRVSKVSIRSSNTSIRKCVATSSTEKTGYKTGVSRN 199
+AQ L ++ FLA ++ R VS S N I +CVA E T YKT VSRN
Sbjct: 3 IAQHLSTSISSSSSAFLASSSFNY-RNRDVSFPSKNFGICRCVAAPQEETTIYKTKVSRN 61
Query: 200 ANMAKLQAGYLFPEIARRRAAHMLKYPDAEVIRLGIGDTTEPIPEVITSAMAMKSHALST 379
NMAKLQAGYLFPEIARRR AH+ KYPD++VI LGIGDTTEPIPEVITSAMA +S ALST
Sbjct: 62 VNMAKLQAGYLFPEIARRRNAHLQKYPDSKVISLGIGDTTEPIPEVITSAMAKRSQALST 121
Query: 380 LEGYSGYGAEQGDKQVRAALASSFYADLGIEESDIFVSDGAKCDISRLQLLFGSNVTIAV 559
LEGYSGYGAEQG+K +R A+AS+FY DLGI E DIFVSDGAKCDISRLQ+LFGSNVTIAV
Sbjct: 122 LEGYSGYGAEQGEKLLRTAIASTFYGDLGIGEDDIFVSDGAKCDISRLQVLFGSNVTIAV 181
Query: 560 QDPSYPAYVDSSVIMGQTGQFQNDVEKYGNIEYMRCSPENDFFPDLSKVSRTDVIYFCSP 739
QDPSYPAYVDSSVIMGQTG +Q D E+YGNIEYMRC+PEN FFPDLSKVSRTD+I+FCSP
Sbjct: 182 QDPSYPAYVDSSVIMGQTGLYQKDAERYGNIEYMRCNPENGFFPDLSKVSRTDIIFFCSP 241
Query: 740 NNPTGSAATREQLTRLVQFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAREVAIETSS 919
NNPTGSAATREQLTRLVQFAK NGSIIVYDSAYAMY+SDD PRSIFEIPGA+EVA+ET+S
Sbjct: 242 NNPTGSAATREQLTRLVQFAKDNGSIIVYDSAYAMYISDDKPRSIFEIPGAKEVALETAS 301
Query: 920 FSKYAGFTGVRLGWTVVPKELLFS 991
FSKYAGFTGVRLGWTVVPKELLFS
Sbjct: 302 FSKYAGFTGVRLGWTVVPKELLFS 325
Score = 215 bits (547), Expect(2) = 0.0
Identities = 111/169 (65%), Positives = 118/169 (69%)
Frame = +3
Query: 1050 PKELLFSDGFPVAKDFNRIVCTCFNGASNIAQAGGLACLSPEGLKAMRXXXXXXXXXXXX 1229
PKELLFSDGFPVAKDFNRIVCTCFNGASN+ QAGGLACLS EG AM+
Sbjct: 319 PKELLFSDGFPVAKDFNRIVCTCFNGASNVVQAGGLACLSEEGRNAMQK----------- 367
Query: 1230 XXXXXXXXXXXXXXXXVIRFYQENTQIIVDTFKSLGFNVYGGTNAPYVWVHFPGRSSWDV 1409
V+ FY+EN II+DTF SLGFNVYGG NAPYVWVHFPGRSSWDV
Sbjct: 368 ----------------VVGFYKENADIIMDTFNSLGFNVYGGKNAPYVWVHFPGRSSWDV 411
Query: 1410 FSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRADVLEASKRFKQLYK 1556
FSEILEKTHVVTT IRVSAFGHR +VLEA +RFKQLYK
Sbjct: 412 FSEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRDNVLEACRRFKQLYK 460
>ref|XP_002269153.2| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like
[Vitis vinifera]
Length = 460
Score = 494 bits (1271), Expect(2) = 0.0
Identities = 243/300 (81%), Positives = 273/300 (91%)
Frame = +2
Query: 92 NRVSKVSIRSSNTSIRKCVATSSTEKTGYKTGVSRNANMAKLQAGYLFPEIARRRAAHML 271
+R + + ++ I KCVAT TE T + T VSRNANMAKLQAGYLFPEIARRR+AHML
Sbjct: 26 SRTPNARLPTKDSWICKCVATPPTETTAHMTKVSRNANMAKLQAGYLFPEIARRRSAHML 85
Query: 272 KYPDAEVIRLGIGDTTEPIPEVITSAMAMKSHALSTLEGYSGYGAEQGDKQVRAALASSF 451
KYPDA+VI LGIGDTTEPIPEVITS MA K++ALSTLEGYSGYGAEQG+ ++RAA+AS++
Sbjct: 86 KYPDAQVISLGIGDTTEPIPEVITSGMAKKANALSTLEGYSGYGAEQGENRLRAAIASTY 145
Query: 452 YADLGIEESDIFVSDGAKCDISRLQLLFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFQND 631
Y DL IEESDIFVSDGAK DISRLQ++FGSNVT+AVQDPSYPAYVDSSVI+GQTGQFQ D
Sbjct: 146 YGDLSIEESDIFVSDGAKSDISRLQVMFGSNVTMAVQDPSYPAYVDSSVILGQTGQFQKD 205
Query: 632 VEKYGNIEYMRCSPENDFFPDLSKVSRTDVIYFCSPNNPTGSAATREQLTRLVQFAKKNG 811
VEKYGNIEYM+C+PEN FFPDLS VSRTD+I+FCSPNNPTG+AATREQLTRLVQFAK NG
Sbjct: 206 VEKYGNIEYMKCNPENGFFPDLSTVSRTDIIFFCSPNNPTGNAATREQLTRLVQFAKDNG 265
Query: 812 SIIVYDSAYAMYMSDDNPRSIFEIPGAREVAIETSSFSKYAGFTGVRLGWTVVPKELLFS 991
SI+VYDSAYAMY+SDD+PRSIFEIPGA+EVAIE SSFSKYAGFTGVRLGWTVVPKELL+S
Sbjct: 266 SILVYDSAYAMYISDDSPRSIFEIPGAKEVAIEVSSFSKYAGFTGVRLGWTVVPKELLYS 325
Score = 216 bits (550), Expect(2) = 0.0
Identities = 112/169 (66%), Positives = 121/169 (71%)
Frame = +3
Query: 1050 PKELLFSDGFPVAKDFNRIVCTCFNGASNIAQAGGLACLSPEGLKAMRXXXXXXXXXXXX 1229
PKELL+SDGFPVAKDFNRIVCT FNGASNI+QAGGLACLSPEGL+AM
Sbjct: 319 PKELLYSDGFPVAKDFNRIVCTTFNGASNISQAGGLACLSPEGLEAMHK----------- 367
Query: 1230 XXXXXXXXXXXXXXXXVIRFYQENTQIIVDTFKSLGFNVYGGTNAPYVWVHFPGRSSWDV 1409
V+ FYQENT II++TF SLGF+VYGG NAPYVWVHFPG+SSWDV
Sbjct: 368 ----------------VVGFYQENTNIIMETFTSLGFSVYGGKNAPYVWVHFPGQSSWDV 411
Query: 1410 FSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRADVLEASKRFKQLYK 1556
FSEILEKTHVVTT IRVSAFGHR +VLEA KRFKQLYK
Sbjct: 412 FSEILEKTHVVTTPGSGFGPAGDGFIRVSAFGHRGNVLEACKRFKQLYK 460
>ref|XP_003529277.1| PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like
[Glycine max]
Length = 458
Score = 492 bits (1266), Expect(2) = 0.0
Identities = 245/320 (76%), Positives = 279/320 (87%)
Frame = +2
Query: 32 LMMNLXXXXXXFLAPNTITTNRVSKVSIRSSNTSIRKCVATSSTEKTGYKTGVSRNANMA 211
L +L FLAP++ N +VS+ + SI KCVAT E T YKTGV+RN NM
Sbjct: 7 LTTSLSSSSSAFLAPSSF--NSRGQVSLPVKSVSICKCVATPEAE-TAYKTGVTRNPNMG 63
Query: 212 KLQAGYLFPEIARRRAAHMLKYPDAEVIRLGIGDTTEPIPEVITSAMAMKSHALSTLEGY 391
KLQAGYLFPEIARRR+AH+LKYPDA+VI LGIGDTTEPIPEVIT AM+ +SHALST+EGY
Sbjct: 64 KLQAGYLFPEIARRRSAHLLKYPDAKVISLGIGDTTEPIPEVITDAMSKRSHALSTIEGY 123
Query: 392 SGYGAEQGDKQVRAALASSFYADLGIEESDIFVSDGAKCDISRLQLLFGSNVTIAVQDPS 571
SGYGAEQG+K +R ALAS+FY+DLGIEE DIFVSDGAKCDISRLQ++FGSNV +AVQDPS
Sbjct: 124 SGYGAEQGEKPLRRALASTFYSDLGIEEDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPS 183
Query: 572 YPAYVDSSVIMGQTGQFQNDVEKYGNIEYMRCSPENDFFPDLSKVSRTDVIYFCSPNNPT 751
YPAYVDSSVIMGQTG +Q DVEK+ NIEYMRC+PEN FFPDLS +SR D+I+FCSPNNPT
Sbjct: 184 YPAYVDSSVIMGQTGLYQKDVEKFANIEYMRCNPENGFFPDLSSISRPDIIFFCSPNNPT 243
Query: 752 GSAATREQLTRLVQFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAREVAIETSSFSKY 931
G+AATREQLT+LVQFAK NGSI+++DSAYAMY+S DNPRSIFEIPGA+EVAIETSSFSKY
Sbjct: 244 GAAATREQLTQLVQFAKDNGSIVIHDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKY 303
Query: 932 AGFTGVRLGWTVVPKELLFS 991
AGFTGVRLGWTVVPK+LLFS
Sbjct: 304 AGFTGVRLGWTVVPKQLLFS 323
Score = 218 bits (554), Expect(2) = 0.0
Identities = 112/169 (66%), Positives = 122/169 (72%)
Frame = +3
Query: 1050 PKELLFSDGFPVAKDFNRIVCTCFNGASNIAQAGGLACLSPEGLKAMRXXXXXXXXXXXX 1229
PK+LLFSDGFPVAKDFNRIVCTCFNGASNI+QAGGLACLSP+GLKAMR
Sbjct: 317 PKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPDGLKAMRD----------- 365
Query: 1230 XXXXXXXXXXXXXXXXVIRFYQENTQIIVDTFKSLGFNVYGGTNAPYVWVHFPGRSSWDV 1409
VI FY+ENT II++TF SLGF VYGG +APYVWVHFPGRSSWDV
Sbjct: 366 ----------------VIGFYKENTDIIMETFDSLGFKVYGGKDAPYVWVHFPGRSSWDV 409
Query: 1410 FSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRADVLEASKRFKQLYK 1556
F+EILEKTHVVTT IRVSAFGHR +VLEA +RFKQLYK
Sbjct: 410 FAEILEKTHVVTTPGSGFGPGGEGFIRVSAFGHRENVLEACRRFKQLYK 458