BLASTX nr result

ID: Coptis25_contig00006162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006162
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318786.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
ref|XP_002511077.1| conserved hypothetical protein [Ricinus comm...   468   e-130
ref|XP_002284706.1| PREDICTED: chromophore lyase CpcT/CpeT 3 [Vi...   462   e-128
dbj|BAJ53116.1| JHL07K02.6 [Jatropha curcas]                          458   e-126
ref|XP_003523180.1| PREDICTED: chromophore lyase CpcT/CpeT 3-lik...   456   e-126

>ref|XP_002318786.1| predicted protein [Populus trichocarpa] gi|222859459|gb|EEE97006.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  473 bits (1216), Expect = e-131
 Identities = 213/265 (80%), Positives = 243/265 (91%)
 Frame = -3

Query: 966 GTGDAGSSDTNGWNRARGLVVKTLVLIGGAVLLKRLTKSTTRWDHARIVADALTGEKFSR 787
           G+G   +SD+NGW RARGL +K+LVLIGG +L+KRLTKSTTRWDHA+IV  +LTGEKFS+
Sbjct: 8   GSGSDPTSDSNGWGRARGLALKSLVLIGGVLLVKRLTKSTTRWDHAKIVTQSLTGEKFSK 67

Query: 786 EQASRDPDNYFNLRMFTCPAAEMVDGSKVLYVEQAFWRTPQKPFRQRFYMVKPCSKDMKC 607
           EQASRDPDNYFN+RM TCPAAEMVDGSKVLY EQAFWRTPQKPFRQRFYMVKPC K++KC
Sbjct: 68  EQASRDPDNYFNIRMLTCPAAEMVDGSKVLYFEQAFWRTPQKPFRQRFYMVKPCPKELKC 127

Query: 606 DVELSSYAIRDAEEYKNFCDRSKDQRPLPEEVVEDVAEHLTTIYLKRCQRGKRCLYEGST 427
           DVE+ SYAIRDAEEYKNFCDRSKDQRPLPEEV+ D+AEHLTTI+LKRC RGKRCLYEGS 
Sbjct: 128 DVEVGSYAIRDAEEYKNFCDRSKDQRPLPEEVIGDIAEHLTTIHLKRCDRGKRCLYEGSN 187

Query: 426 PPGGFPNSWNGASYCTSELAVVKKDELHTWDRGYDENGNQVWGVKSGPYEFRPAPASSSS 247
           PPGGFPNSWNGA+YCTSELA++K +E+HTWDRGYD+ GNQVWGVK GPYEF+PAPASS S
Sbjct: 188 PPGGFPNSWNGATYCTSELAILKNNEIHTWDRGYDDGGNQVWGVKEGPYEFKPAPASSVS 247

Query: 246 DMFSPLNVTPLEFLEKRVEGSFALQ 172
           ++FSPLN+ PL+ +EKR+EGSF LQ
Sbjct: 248 ELFSPLNLPPLQSMEKRIEGSFVLQ 272


>ref|XP_002511077.1| conserved hypothetical protein [Ricinus communis]
           gi|223550192|gb|EEF51679.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 265

 Score =  468 bits (1205), Expect = e-130
 Identities = 212/259 (81%), Positives = 240/259 (92%)
 Frame = -3

Query: 945 SDTNGWNRARGLVVKTLVLIGGAVLLKRLTKSTTRWDHARIVADALTGEKFSREQASRDP 766
           S++NGW+RARG+V+KTLVLIGGAVL+KRLTKSTTRWDHAR V+ +L+GEKFSREQA+RDP
Sbjct: 7   SESNGWSRARGIVIKTLVLIGGAVLVKRLTKSTTRWDHARFVSQSLSGEKFSREQAARDP 66

Query: 765 DNYFNLRMFTCPAAEMVDGSKVLYVEQAFWRTPQKPFRQRFYMVKPCSKDMKCDVELSSY 586
           DNYFN+RM TCPAAEMVDGSKVLY EQAFWRTPQKPFRQRFYMVKPC K++KCDVE+SSY
Sbjct: 67  DNYFNIRMLTCPAAEMVDGSKVLYFEQAFWRTPQKPFRQRFYMVKPCPKELKCDVEVSSY 126

Query: 585 AIRDAEEYKNFCDRSKDQRPLPEEVVEDVAEHLTTIYLKRCQRGKRCLYEGSTPPGGFPN 406
           AIRDAEEYKNFCDR KDQRPLPEEV+ D+AEHLTTIYL RC RGKRCLYEGSTPPGGFPN
Sbjct: 127 AIRDAEEYKNFCDRPKDQRPLPEEVIGDIAEHLTTIYLNRCDRGKRCLYEGSTPPGGFPN 186

Query: 405 SWNGASYCTSELAVVKKDELHTWDRGYDENGNQVWGVKSGPYEFRPAPASSSSDMFSPLN 226
           SWNGA++CTSELA++K +ELHTWDRGYD++GNQVWGVK GPYEF+PAP SS +DMFSPLN
Sbjct: 187 SWNGATFCTSELAILKNNELHTWDRGYDDDGNQVWGVKEGPYEFKPAPGSSVNDMFSPLN 246

Query: 225 VTPLEFLEKRVEGSFALQD 169
             P   +EKR+EGSF LQ+
Sbjct: 247 FPPPLSMEKRIEGSFVLQE 265


>ref|XP_002284706.1| PREDICTED: chromophore lyase CpcT/CpeT 3 [Vitis vinifera]
           gi|147860848|emb|CAN83158.1| hypothetical protein
           VITISV_022553 [Vitis vinifera]
           gi|297734523|emb|CBI15770.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  462 bits (1188), Expect = e-128
 Identities = 212/267 (79%), Positives = 237/267 (88%)
 Frame = -3

Query: 969 MGTGDAGSSDTNGWNRARGLVVKTLVLIGGAVLLKRLTKSTTRWDHARIVADALTGEKFS 790
           MGTG    S+ NGW RARG++VK  VLIGGA+LLKRLTKSTTRWDHAR V+ +L+GEKFS
Sbjct: 1   MGTGSDSESEGNGWGRARGILVKAAVLIGGAILLKRLTKSTTRWDHARFVSHSLSGEKFS 60

Query: 789 REQASRDPDNYFNLRMFTCPAAEMVDGSKVLYVEQAFWRTPQKPFRQRFYMVKPCSKDMK 610
            EQASRDPDNYFN RM TCPAAE+VDGS+VLY EQAFWRTP KPFRQRFYMVKPC K+MK
Sbjct: 61  MEQASRDPDNYFNFRMVTCPAAELVDGSRVLYFEQAFWRTPSKPFRQRFYMVKPCPKEMK 120

Query: 609 CDVELSSYAIRDAEEYKNFCDRSKDQRPLPEEVVEDVAEHLTTIYLKRCQRGKRCLYEGS 430
           CDVELSSYAIRD EEYKNFCDRSK QRPLPEEV+ D+AEHLTTIYLKRC+RGKRCLYEGS
Sbjct: 121 CDVELSSYAIRDVEEYKNFCDRSKAQRPLPEEVIGDIAEHLTTIYLKRCERGKRCLYEGS 180

Query: 429 TPPGGFPNSWNGASYCTSELAVVKKDELHTWDRGYDENGNQVWGVKSGPYEFRPAPASSS 250
           TP GGFPNSW+GA+YCTSELAV+K +E+H WDRGYD+ GNQVWGVK GPYEF+PAPASSS
Sbjct: 181 TPSGGFPNSWSGATYCTSELAVLKNNEIHIWDRGYDDEGNQVWGVKEGPYEFKPAPASSS 240

Query: 249 SDMFSPLNVTPLEFLEKRVEGSFALQD 169
           +DMFSPLN  P   +EKR++GSF LQ+
Sbjct: 241 NDMFSPLNFAPPLPMEKRIDGSFVLQE 267


>dbj|BAJ53116.1| JHL07K02.6 [Jatropha curcas]
          Length = 265

 Score =  458 bits (1178), Expect = e-126
 Identities = 209/264 (79%), Positives = 237/264 (89%)
 Frame = -3

Query: 960 GDAGSSDTNGWNRARGLVVKTLVLIGGAVLLKRLTKSTTRWDHARIVADALTGEKFSREQ 781
           G    S++NGW+RARGLVVKTLVLIGGA+L+KRLTKSTTRWDH RIV  +L+GEKFSREQ
Sbjct: 2   GSGSDSESNGWSRARGLVVKTLVLIGGAILVKRLTKSTTRWDHTRIVTQSLSGEKFSREQ 61

Query: 780 ASRDPDNYFNLRMFTCPAAEMVDGSKVLYVEQAFWRTPQKPFRQRFYMVKPCSKDMKCDV 601
           ASRDPDNYFN+RM TCPAA+MVDGSKVLY E+AF RTPQKPFRQRFYMVKPC K++KCDV
Sbjct: 62  ASRDPDNYFNIRMLTCPAADMVDGSKVLYFERAFCRTPQKPFRQRFYMVKPCPKELKCDV 121

Query: 600 ELSSYAIRDAEEYKNFCDRSKDQRPLPEEVVEDVAEHLTTIYLKRCQRGKRCLYEGSTPP 421
           E+SSYAIRDAEEYKNFCDR KDQRPLPEEV+ D+AEHLTTIYLKRC RGKRCLYEGSTPP
Sbjct: 122 EVSSYAIRDAEEYKNFCDRPKDQRPLPEEVIGDIAEHLTTIYLKRCDRGKRCLYEGSTPP 181

Query: 420 GGFPNSWNGASYCTSELAVVKKDELHTWDRGYDENGNQVWGVKSGPYEFRPAPASSSSDM 241
           GGFPNSWNGA++CTSELA++K +E+HTWDRGYD++GNQVWGVK GPYEF+PAPASS + M
Sbjct: 182 GGFPNSWNGATHCTSELAILKNNEIHTWDRGYDDDGNQVWGVKDGPYEFKPAPASSVNGM 241

Query: 240 FSPLNVTPLEFLEKRVEGSFALQD 169
              LN  P   +EKR+EGSF LQ+
Sbjct: 242 LPALNFPPPHSMEKRIEGSFVLQE 265


>ref|XP_003523180.1| PREDICTED: chromophore lyase CpcT/CpeT 3-like [Glycine max]
          Length = 266

 Score =  456 bits (1173), Expect = e-126
 Identities = 205/267 (76%), Positives = 240/267 (89%)
 Frame = -3

Query: 969 MGTGDAGSSDTNGWNRARGLVVKTLVLIGGAVLLKRLTKSTTRWDHARIVADALTGEKFS 790
           MGTGD+  S++NGWNRARGL +KTL+LIGGA+L+KRL KSTTRWDHA  V+++LTGEK+S
Sbjct: 1   MGTGDS-DSESNGWNRARGLALKTLLLIGGALLVKRLRKSTTRWDHAHFVSNSLTGEKYS 59

Query: 789 REQASRDPDNYFNLRMFTCPAAEMVDGSKVLYVEQAFWRTPQKPFRQRFYMVKPCSKDMK 610
           +EQASRDPDNYFN+RM TCPAAE+VDGSKVLY EQAFWRTPQKPFRQR +MVKPC K++K
Sbjct: 60  KEQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRTPQKPFRQRLFMVKPCPKELK 119

Query: 609 CDVELSSYAIRDAEEYKNFCDRSKDQRPLPEEVVEDVAEHLTTIYLKRCQRGKRCLYEGS 430
           CDVELS+YAIRD EEYKNFCDR +DQRP PEEV+ D+AEHLTT++LKRC RGKRCLYEGS
Sbjct: 120 CDVELSTYAIRDMEEYKNFCDRPRDQRPQPEEVIGDIAEHLTTVHLKRCPRGKRCLYEGS 179

Query: 429 TPPGGFPNSWNGASYCTSELAVVKKDELHTWDRGYDENGNQVWGVKSGPYEFRPAPASSS 250
           TPPGGFPNSWNGA+YCTSELA++K +E+HTWDRGYD+ GNQVWG K GPYEF+PAP SS 
Sbjct: 180 TPPGGFPNSWNGATYCTSELAILKNNEIHTWDRGYDDGGNQVWGQKEGPYEFKPAPTSSF 239

Query: 249 SDMFSPLNVTPLEFLEKRVEGSFALQD 169
           +DMFSPLN  P   +E+R+EGSF LQ+
Sbjct: 240 NDMFSPLNFPPPPSMERRIEGSFVLQE 266


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