BLASTX nr result
ID: Coptis25_contig00006157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006157
(1891 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275477.2| PREDICTED: zinc finger protein NUTCRACKER-li... 472 e-130
ref|XP_002519549.1| nucleic acid binding protein, putative [Rici... 459 e-126
ref|XP_002282251.2| PREDICTED: uncharacterized protein LOC100248... 456 e-125
emb|CBI16293.3| unnamed protein product [Vitis vinifera] 439 e-120
ref|XP_002532599.1| nucleic acid binding protein, putative [Rici... 433 e-119
>ref|XP_002275477.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
Length = 490
Score = 472 bits (1215), Expect = e-130
Identities = 274/552 (49%), Positives = 332/552 (60%), Gaps = 10/552 (1%)
Frame = +2
Query: 11 MSSGDWQQLSIPSAIVREFSQEPNSNITPLNTTSSAVKKKRNLPGTPDPDAEVVALSPKT 190
M SGD SIPS+I R F+Q+P++N N KKKRNLPGTPDPDAEV+ALSPKT
Sbjct: 1 MMSGD--MFSIPSSI-RTFAQDPDANP---NNLKPPPKKKRNLPGTPDPDAEVIALSPKT 54
Query: 191 LIATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEIRKKVYICPEKSCVHHDS 370
L+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR+NKE+RKKVYICPEK+CVHHD
Sbjct: 55 LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVRKKVYICPEKTCVHHDP 114
Query: 371 SRALGDLTGIKKHFFRKHGXXXXXXXXXXXXYAVQSDWKAHNKTCGTREYKCDCGTLFSR 550
SRALGDLTGIKKHF RKHG YAVQSDWKAH+KTCGTREYKCDCGTLFSR
Sbjct: 115 SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSR 174
Query: 551 KDSFITHRAFCDALADESSRFTSVAGASLNFRTDSIVRSNLPQQSASLPHGFGSWGGLDA 730
KDSFITHRAFCDALA+E +R TSVA +LNFR DS+ + + Q L +GF GG DA
Sbjct: 175 KDSFITHRAFCDALAEERARITSVAATNLNFRNDSMNETVINPQPGLL-NGFSGRGGPDA 233
Query: 731 VSIPQFCPMFCGTHTSIPPDSNEQKPRLSLWLDQANSQMNHIDVASNSDAFMDSNSSTGL 910
I QFCP F PD TGL
Sbjct: 234 AGISQFCPGF-------GPD------------------------------------LTGL 250
Query: 911 SDLLQMASSKKFGSFSTDDYGGI-PSQWMNKRTGEATNAELSLSKSPRGLKKEDGSKGKM 1087
+++Q+A+S FGS S ++G S W++K + + A LSL+ P LK+E+G+KG M
Sbjct: 251 PEMVQVAASNLFGSSSVGNFGSCNESPWLDKSSATSNGANLSLASLPHALKEEEGNKGSM 310
Query: 1088 VESLASLYADEVNQHSN-------TTLLQKATQMGATRXXXXXXXXXXXXXXXXXXDTNS 1246
VE+L SLY+ +Q S+ T LLQKA QMG+TR + +
Sbjct: 311 VETLTSLYSGNHSQQSSPAAPMSATALLQKAAQMGSTRSNPSFFGNSFGVMNSSGSHSTT 370
Query: 1247 FNPHTDQTKNEFHHLVRQVKQQENLNDYFVMNMSNAMGNTSTGNDMYNMLNVSSLGDTVH 1426
N T +NE H + KQ ENL M S + +SSL T +
Sbjct: 371 LNTLT-HNRNELHQVFGTGKQHENL-----------MATASLSEGVLAGSGLSSLTSTSN 418
Query: 1427 NLNRQMIQHNADQGQSNIFR--MSTESVEQSSTRDFLGVGGEAISTPFLQQELAKFSSMG 1600
NL + M+Q + Q + + + + SVE S TRDFLG+GG PFL QELAKF+SMG
Sbjct: 419 NLAQMMMQTSGKQTEPVPLKLHLGSNSVENSLTRDFLGMGGGESGRPFLPQELAKFASMG 478
Query: 1601 SRMVLSEYNGSH 1636
S M LS + +H
Sbjct: 479 SAMGLSHFTSNH 490
>ref|XP_002519549.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223541412|gb|EEF42963.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 525
Score = 459 bits (1181), Expect = e-126
Identities = 273/561 (48%), Positives = 340/561 (60%), Gaps = 19/561 (3%)
Frame = +2
Query: 8 MMSSGDWQQLSIPSAI--VREFSQEPNSNITPLNTTSSAVKKKRNLPGTPDPDAEVVALS 181
MMS G SIPS++ Q+ N+N P +SA KKKRNLPGTPDPDAEV+ALS
Sbjct: 1 MMSGGHHDAFSIPSSLPGFAHLDQQQNANPNPKPNPNSAAKKKRNLPGTPDPDAEVIALS 60
Query: 182 PKTLIATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEIRKKVYICPEKSCVH 361
PKTL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QRTNKE++KKVYICPEK+CVH
Sbjct: 61 PKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKKVYICPEKTCVH 120
Query: 362 HDSSRALGDLTGIKKHFFRKHGXXXXXXXXXXXXYAVQSDWKAHNKTCGTREYKCDCGTL 541
HD+SRALGDLTGIKKHF RKHG YAVQSDWKAH+KTCGTREYKCDCGTL
Sbjct: 121 HDASRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTL 180
Query: 542 FSRKDSFITHRAFCDALADESSRFTSVAGASLNFRTDSIVRSNLPQQSASLPHGFGSWGG 721
FSRKDSFITHRAFCDALA+ES+RF S A+LNFR ++ V +LPHG G
Sbjct: 181 FSRKDSFITHRAFCDALAEESARFNSAPPANLNFRNENSV--------VNLPHGAPGHGV 232
Query: 722 LDAVSIPQFCPMFCGTHTSIPP--DSNEQKPR-LSLWLDQANSQMNHIDVASNSDAFMDS 892
D SI QF + + S++QKP LSLWL+Q NS MN D +N+ + S
Sbjct: 233 QDIASISQFSTSTFRSDVNAMTCVSSDQQKPAGLSLWLNQVNSHMNPADTVANNSSLYAS 292
Query: 893 NSSTGLSDLLQMASSKKFGSFSTDDYGGIPSQWMNKRTGEATNAELSLSKSPRGLKKEDG 1072
++STGL +++Q+ SS +GS S ++G L+LS P GLK+E+G
Sbjct: 293 SNSTGLPEMVQIGSSNLYGSSSATNFG-----------------NLTLSGLPHGLKEEEG 335
Query: 1073 --SKGKMVESLASLYADE--------VNQHSNTTLLQKATQMGATRXXXXXXXXXXXXXX 1222
+ M +SL SLY+D V S T LLQKA QMG+TR
Sbjct: 336 GDKRTNMTDSLPSLYSDNHQNKQSKPVAPMSATALLQKAAQMGSTRSSNQSFFGGSSNYG 395
Query: 1223 XXXXDTNSFNP----HTDQTKNEFHHLVRQVKQQENLNDYFVMNMSNAMGNTSTGNDMYN 1390
++S N Q +NE H + + V +Q+ N + S MG+
Sbjct: 396 LMSSSSSSSNTTNLNSLRQNRNELHQVFQNVNKQQESN-LTASSCSMPMGDAI------- 447
Query: 1391 MLNVSSLGDTVHNLNRQMIQHNADQGQSNIFRMSTESVEQSSTRDFLGVGGEAISTPFLQ 1570
M+ SS D V + Q +D Q + ST S+E TRDFLG+ G++ PFL
Sbjct: 448 MIAASSGLDQV--VLMQSSGKQSDPVQLKLQPGST-SLESGLTRDFLGMSGQS-GRPFLP 503
Query: 1571 QELAKFSSMGSRMVLSEYNGS 1633
QE+AKF+SM + M LS++ G+
Sbjct: 504 QEIAKFASMSAVMGLSQFTGN 524
>ref|XP_002282251.2| PREDICTED: uncharacterized protein LOC100248459 [Vitis vinifera]
Length = 527
Score = 456 bits (1172), Expect = e-125
Identities = 266/550 (48%), Positives = 348/550 (63%), Gaps = 16/550 (2%)
Frame = +2
Query: 35 LSIPSAIVREFSQEPNSNITPLNTTSSAVKKKRNLPGTPDPDAEVVALSPKTLIATNRFV 214
L++PS+I R F QEPNSN P N +++ VKKKRNLPGTPDP+AEV+ALSPK+L+ATNRF+
Sbjct: 7 LTLPSSI-RGFVQEPNSNPNP-NPSANPVKKKRNLPGTPDPEAEVIALSPKSLMATNRFI 64
Query: 215 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEIRKKVYICPEKSCVHHDSSRALGDLT 394
CEICNKGFQRDQNLQLHRRGHNLPWKLRQRT+KE+RKKVYICPEKSCVHH+ +RALGDLT
Sbjct: 65 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKKVYICPEKSCVHHNPTRALGDLT 124
Query: 395 GIKKHFFRKHGXXXXXXXXXXXXYAVQSDWKAHNKTCGTREYKCDCGTLFSRKDSFITHR 574
GIKKH+ RKHG YAVQSDWKAH+K CGTREYKCDCGTLFSRKDSFITHR
Sbjct: 125 GIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRKDSFITHR 184
Query: 575 AFCDALADESSRFTSVAGASLNFRTDSIVRSNLPQQSASLPHGFGSWGGLDAVSIPQFCP 754
AFCDALA+ES+R TSV+ + FR + ++ ++ A + F S F P
Sbjct: 185 AFCDALAEESARLTSVSAPNPIFRNE-LMNGSISNPQAHIIPQFSS----------VFRP 233
Query: 755 MFCGTHTSIPP-DSNEQKPRLSLWLDQANSQMNHIDVASNSDAFMDSNSSTGLSDLLQMA 931
F G+ + +++ QKPRL LWLD ANS +N+ + N++ + +S GL +++Q A
Sbjct: 234 EFVGSEQLVGHLNADGQKPRLPLWLDHANSHLNN-PIGVNTNGSFLAPTSAGLPEMVQTA 292
Query: 932 SSKKFGSFSTDDYGGIPSQWMNKRTGEATNAELSLSKSPRGLKKEDGSKGKMVESLASLY 1111
+GS ++ +QW+ + + A + S PR LK+E+ +KG + ES+ SL+
Sbjct: 293 PMSMYGSPASSQ-----NQWLQR----CSEASFTSSTLPRVLKEEEENKGNLSESITSLF 343
Query: 1112 ADEVNQH------SNTTLLQKATQMGATR-XXXXXXXXXXXXXXXXXXDTNSFN--PHTD 1264
+ NQ S T LLQKA QMG+T+ +T F+ PH
Sbjct: 344 SSNQNQQESSAHMSATALLQKAAQMGSTKSNSAFFSTTGFGSINSSLSNTTPFSSYPHGR 403
Query: 1265 QTKNEFHHLVRQVKQQENLNDYFVMNMSNAMGNTSTGND--MYNMLNVSSLGDTVHNL-- 1432
L+RQ Q +++N + N+ +ST D + +N + L DT N
Sbjct: 404 SNNQVHKFLIRQSNQSDSMN-----QLINSTSPSSTMGDGLLMGDMNSTPLVDTAKNNMD 458
Query: 1433 NRQMIQHNADQGQ--SNIFRMSTESVEQSSTRDFLGVGGEAISTPFLQQELAKFSSMGSR 1606
+ M+ N Q Q + F S+ VE+ TRDFLGVG +A S PFLQQELAKF+SMGS
Sbjct: 459 HFLMVPSNPKQAQQIAGKFHASSNEVERGLTRDFLGVGSDA-SRPFLQQELAKFASMGSA 517
Query: 1607 MVLSEYNGSH 1636
M +S+Y+G+H
Sbjct: 518 MGMSQYSGNH 527
>emb|CBI16293.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 439 bits (1128), Expect = e-120
Identities = 259/543 (47%), Positives = 327/543 (60%), Gaps = 9/543 (1%)
Frame = +2
Query: 35 LSIPSAIVREFSQEPNSNITPLNTTSSAVKKKRNLPGTPDPDAEVVALSPKTLIATNRFV 214
L++PS+I R F QEPNSN P N +++ VKKKRNLPGTPDP+AEV+ALSPK+L+ATNRF+
Sbjct: 6 LTLPSSI-RGFVQEPNSNPNP-NPSANPVKKKRNLPGTPDPEAEVIALSPKSLMATNRFI 63
Query: 215 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEIRKKVYICPEKSCVHHDSSRALGDLT 394
CEICNKGFQRDQNLQLHRRGHNLPWKLRQRT+KE+RKKVYICPEKSCVHH+ +RALGDLT
Sbjct: 64 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSKEVRKKVYICPEKSCVHHNPTRALGDLT 123
Query: 395 GIKKHFFRKHGXXXXXXXXXXXXYAVQSDWKAHNKTCGTREYKCDCGTLFSRKDSFITHR 574
GIKKH+ RKHG YAVQSDWKAH+K CGTREYKCDCGTLFSRKDSFITHR
Sbjct: 124 GIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRKDSFITHR 183
Query: 575 AFCDALADESSRFTSVAGASLNFRTDSIVRSNLPQQSASLPHGFGSWGGLDAVSIPQFCP 754
AFCDALA+ES+R TSV+ + I R+ L S S P A IPQF
Sbjct: 184 AFCDALAEESARLTSVSA------PNPIFRNELMNGSISNP---------QAHIIPQF-- 226
Query: 755 MFCGTHTSIPPDSNEQKPRLSLWLDQANSQMNHIDVASNSDAFMDSNSSTGLSDLLQMAS 934
PRL LWLD ANS +N+ + N++ + +S GL +++Q A
Sbjct: 227 ---------------SSPRLPLWLDHANSHLNN-PIGVNTNGSFLAPTSAGLPEMVQTAP 270
Query: 935 SKKFGSFSTDDYGGIPSQWMNKRTGEATNAELSLSKSPRGLKKEDGSKGKMVESLASLYA 1114
+GS ++ +QW+ + + A + S PR LK+E+ +KG + ES+ SL++
Sbjct: 271 MSMYGSPASSQ-----NQWLQR----CSEASFTSSTLPRVLKEEEENKGNLSESITSLFS 321
Query: 1115 DEVNQH------SNTTLLQKATQMGATR-XXXXXXXXXXXXXXXXXXDTNSFN--PHTDQ 1267
NQ S T LLQKA QMG+T+ +T F+ PH
Sbjct: 322 SNQNQQESSAHMSATALLQKAAQMGSTKSNSAFFSTTGFGSINSSLSNTTPFSSYPHGRS 381
Query: 1268 TKNEFHHLVRQVKQQENLNDYFVMNMSNAMGNTSTGNDMYNMLNVSSLGDTVHNLNRQMI 1447
L+RQ Q +++N + N+ +ST D M
Sbjct: 382 NNQVHKFLIRQSNQSDSMN-----QLINSTSPSSTMGDGLLM------------------ 418
Query: 1448 QHNADQGQSNIFRMSTESVEQSSTRDFLGVGGEAISTPFLQQELAKFSSMGSRMVLSEYN 1627
D + +F S+ VE+ TRDFLGVG +A S PFLQQELAKF+SMGS M +S+Y+
Sbjct: 419 ---GDMNSTPLFHASSNEVERGLTRDFLGVGSDA-SRPFLQQELAKFASMGSAMGMSQYS 474
Query: 1628 GSH 1636
G+H
Sbjct: 475 GNH 477
>ref|XP_002532599.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527655|gb|EEF29765.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 543
Score = 433 bits (1113), Expect = e-119
Identities = 271/557 (48%), Positives = 329/557 (59%), Gaps = 35/557 (6%)
Frame = +2
Query: 38 SIPSAIVREFSQEPNSNITPLNTTSSAVKKKRNLPGTPDPDAEVVALSPKTLIATNRFVC 217
SIPS I+ F QEP +N P T++ +KKKRNLPGTPDPDAEVVALSPK+L+ATNRF+C
Sbjct: 8 SIPSTIIG-FVQEPTTNPNPNPTSNPVMKKKRNLPGTPDPDAEVVALSPKSLMATNRFLC 66
Query: 218 EICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEIRKKVYICPEKSCVHHDSSRALGDLTG 397
EICNKGFQRDQNLQLHRRGHNLPWKL+QR+ KE++KKVYICPEKSCVHHD SRALGDLTG
Sbjct: 67 EICNKGFQRDQNLQLHRRGHNLPWKLKQRSTKEVKKKVYICPEKSCVHHDPSRALGDLTG 126
Query: 398 IKKHFFRKHGXXXXXXXXXXXXYAVQSDWKAHNKTCGTREYKCDCGTLFSRKDSFITHRA 577
IKKHF RKHG YAVQSDWKAH+K CGTREY+CDCGTLFSRKDSFITHRA
Sbjct: 127 IKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYRCDCGTLFSRKDSFITHRA 186
Query: 578 FCDALADESSRFTSVAGA-SLNFRTDSIVRSNLPQQSASLPHGFGSWGGLDAVSIPQFCP 754
FCDALA+ES RFT V+ A + N R D I +N S +LP + S F P
Sbjct: 187 FCDALAEESGRFTPVSAAINANLRNDLINGAN----SINLPPPHHQTTVISQFS-SVFRP 241
Query: 755 MFCGTHTSIPPDSNE-----QKPRLSLWLDQANSQMNHIDVASNSDAFMDSNSSTGLSDL 919
F T S SN QKPRL +WLD AN Q+N I V SN+++F+ +L
Sbjct: 242 EFGTTTASELLGSNNLGVDVQKPRLPIWLDNANPQLNPIGVGSNANSFLP-------HEL 294
Query: 920 LQMASSKKFGSFSTDDYGGIPSQWMNKRTGEATNAELSLSKSPRGLKKEDGSKGKMVESL 1099
+Q FGS G QW++K L PRGLK+E+GSKG + ES+
Sbjct: 295 VQTQQINMFGS------GSSQLQWLSK-----YQEGLFTGSLPRGLKEEEGSKGDLTESI 343
Query: 1100 ASLYADEVNQH----------------SNTTLLQKATQMGATRXXXXXXXXXXXXXXXXX 1231
SLY+ N H S T LLQKA QMG+TR
Sbjct: 344 TSLYSS--NHHHQQQRSSLSSSSSAHMSATALLQKAAQMGSTRSNNSISLMSSSLSNVSN 401
Query: 1232 XDTNSFNPHTDQTKNEFHHLVRQVKQQENLNDYFVMNMSNAMGNTST----------GND 1381
++ + + D+T +F + + Q ENLN+ + N + G T G+
Sbjct: 402 FNSYNQRKNNDETL-KFLSSRQPINQAENLNE--LANSISPSGTTPAATFTKESTLLGDS 458
Query: 1382 MYNMLNVSSLGDTVHNLNRQMIQHNADQGQSNI-FRMSTESVEQSSTRDFLGVG-GEAIS 1555
+ + S+ +T + N ++Q A+ Q N F S E VE S TRDFLGVG EA S
Sbjct: 459 NSSSVLTSTRNNTTKHWNHLIMQQQANGDQQNHGFISSDEVVEGSLTRDFLGVGAAEAAS 518
Query: 1556 -TPFLQQELAKFSSMGS 1603
PFLQ EL KF+S+GS
Sbjct: 519 RAPFLQHELVKFASIGS 535