BLASTX nr result
ID: Coptis25_contig00006152
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006152 (750 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 2e-11 emb|CBI32919.3| unnamed protein product [Vitis vinifera] 75 2e-11 gb|EAY77591.1| hypothetical protein OsI_32630 [Oryza sativa Indi... 73 7e-11 ref|NP_001064084.1| Os10g0126800 [Oryza sativa Japonica Group] g... 70 5e-10 gb|ACM17655.1| F-box family-1 [Oryza rufipogon] 68 2e-09 >dbj|BAK06595.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 384 Score = 74.7 bits (182), Expect = 2e-11 Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 1/244 (0%) Frame = +3 Query: 3 QTSLLSKRWRNVWRSVSVLNFDEVEWXXXXXXXXXXXXVDTVLLLRD-GSDIHKFKLFFA 179 +TSLLS RWR VWRS + D E+ VD +LLL D + + K ++ Sbjct: 46 RTSLLSPRWRFVWRSTPFIRIDGAEFMDKSKLENF---VDCLLLLHDYTASLDKARI--- 99 Query: 180 AAHSGDSVQIERWIAYAIKRSVQVLDIAGVSIASPNLICLFGRVNTLDLGAIVLPGDENG 359 + H D + WI +AI V+VL I+G I + T+ L + +L Sbjct: 100 SLHCIDHTKCSVWIRHAIMHKVRVLHISGPLSLDKTAIFPSQHLKTIRLQSAILRHGLFR 159 Query: 360 NLILDLPILENLIIQSCDHCELISLTISGPKLKYLQLYNTFPEINYKTSIKISAVPSLTS 539 L D P+LE+L ++ C+ C+ + IS LK L + Y T+ + +LT Sbjct: 160 PLNYDCPVLEHLELELCNFCD--NEEISSTSLKVLHISQC-----YLTTSLLICARNLTH 212 Query: 540 LKCIGYTYEDYTLENLSALVTAEIDTYMYYREKDADDVATLNISFGRCLSNILKGITNAK 719 L + D ++LS+LVTA I Y D D V + ++L G+++A Sbjct: 213 LSILDPYIGDIVTKDLSSLVTASISLISCY---DKDTVVMDH--------HLLDGLSHAT 261 Query: 720 SLTL 731 +L L Sbjct: 262 TLEL 265 >emb|CBI32919.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 74.7 bits (182), Expect = 2e-11 Identities = 78/252 (30%), Positives = 112/252 (44%), Gaps = 8/252 (3%) Frame = +3 Query: 6 TSLLSKRWRNVWRSVSVLNFD-------EVEWXXXXXXXXXXXXVDTVLLLRDGSDIHKF 164 TS+LSKRWR +W S+ L+FD + VD VLL S I KF Sbjct: 35 TSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSICFKNFVDKVLLHGSISCIRKF 94 Query: 165 KLFFAAAHSGDSVQIERWIAYAIKRSVQVLDIAGVSIASPNLICLFGRVNTLDLGAIVLP 344 +L + H DS + WI A++R+VQ LD+ + L F TL Sbjct: 95 RL-KCSDHELDSA-VNSWICTALERNVQELDLYFDTEYPIELPPKFFFCKTL-------- 144 Query: 345 GDENGNLILDL-PILENLIIQSCDHCELISLTISGPKLKYLQLYNTFPEINYKTSIKISA 521 ++L L P+LE L+I+ E +S P LK L +Y + YK + Sbjct: 145 ------VVLKLCPVLEELVIERWRLDEQWVFNVSAPTLKSLAIYFS----KYKLVVD--- 191 Query: 522 VPSLTSLKCIGYTYEDYTLENLSALVTAEIDTYMYYREKDADDVATLNISFGRCLSNILK 701 P+L L + EDY + NLS+LV A ++ R D I + + +L+ Sbjct: 192 APNLEYLSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDD------QILYRGRIYELLR 245 Query: 702 GITNAKSLTLSG 737 GI+N K L+LSG Sbjct: 246 GISNVKHLSLSG 257 >gb|EAY77591.1| hypothetical protein OsI_32630 [Oryza sativa Indica Group] Length = 454 Score = 72.8 bits (177), Expect = 7e-11 Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 19/266 (7%) Frame = +3 Query: 3 QTSLLSKRWRNVWRSVS---------VLNF----DEV-EWXXXXXXXXXXXXVDTVLLLR 140 +T +LS+RWR+VWR+V LN+ DEV E V+ +L LR Sbjct: 86 RTCVLSRRWRDVWRTVPRVHADFCDFTLNWTSDDDEVDEAAVAEDEVVFNRFVNRLLELR 145 Query: 141 D-GSDIHKFKLFFAAAHSGD--SVQIERWIAYAIKRSVQVLDIAGVSIASPNLICLFGR- 308 D + I F L F + GD S + RWI+YA++++V+VL++A +S A +F Sbjct: 146 DPNASIRSFFLRFCRSDGGDDGSAEGNRWISYALQKNVRVLEVAVLSHALELDHSVFSSR 205 Query: 309 -VNTLDLGAIVLPGDENGNLILDLPILENLIIQSCDHCELISLTISGPKLKYLQLYNTFP 485 + T+D +V+ L + P LE L + D C ++ IS LK L L T Sbjct: 206 YLRTMDFSNVVMNQGFFKQLEMGCPELEELFL---DECFIVDDEISSQTLKVLTLDATHF 262 Query: 486 EINYKTSIKISAVPSLTSLKCIGYTYEDYTLENLSALVTAEIDTYMYYREKDADDVATLN 665 +KTSI + PS+TSL L ++ AL++ + + R KD D A Sbjct: 263 CCGFKTSI---SSPSITSLALHYPMSGKPVLNDMEALMSTSM---LLCRVKDDDFAA--- 313 Query: 666 ISFGRCLSNILKGITNAKSLTLSGHG 743 L + L + N ++L S HG Sbjct: 314 ----NDLRDYLWSLYNVENLDFSYHG 335 >ref|NP_001064084.1| Os10g0126800 [Oryza sativa Japonica Group] gi|20042915|gb|AAM08743.1|AC025098_10 Unknown protein [Oryza sativa Japonica Group] gi|31429986|gb|AAP51963.1| F-box domain containing protein, expressed [Oryza sativa Japonica Group] gi|113638693|dbj|BAF25998.1| Os10g0126800 [Oryza sativa Japonica Group] Length = 454 Score = 70.1 bits (170), Expect = 5e-10 Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 19/266 (7%) Frame = +3 Query: 3 QTSLLSKRWRNVWRSVS---------VLNF----DEV-EWXXXXXXXXXXXXVDTVLLLR 140 +T +LS+RWR+VWR+V LN+ DEV E V+ +L LR Sbjct: 86 RTCVLSRRWRDVWRTVPRVHADFCDFTLNWTSDDDEVDEAAVAEDEVVFNRFVNRLLELR 145 Query: 141 D-GSDIHKFKLFFAAAHSGD--SVQIERWIAYAIKRSVQVLDIAGVSIASPNLICLFGR- 308 D + I F L F + GD S + RWI+YA++++V++L+++ +S A +F Sbjct: 146 DPNASIRSFFLRFCRSDGGDDGSAEGNRWISYALQKNVRILEVSVLSYALELDHSVFSSR 205 Query: 309 -VNTLDLGAIVLPGDENGNLILDLPILENLIIQSCDHCELISLTISGPKLKYLQLYNTFP 485 + T+D +V+ L + P LE L + D C ++ IS LK L L T Sbjct: 206 YLRTMDFSNVVMNQGFFKQLEMGCPELEELFL---DECFIVDDEISSQTLKVLTLDATHF 262 Query: 486 EINYKTSIKISAVPSLTSLKCIGYTYEDYTLENLSALVTAEIDTYMYYREKDADDVATLN 665 +KTSI + PS+TSL L ++ ALV+ + + KD D A Sbjct: 263 CCGFKTSI---SSPSITSLALHYPMSGKPVLNDMEALVSTSM---LLCHVKDDDFAA--- 313 Query: 666 ISFGRCLSNILKGITNAKSLTLSGHG 743 L + L + N + L S HG Sbjct: 314 ----NDLRDYLWSLYNVEILDFSYHG 335 >gb|ACM17655.1| F-box family-1 [Oryza rufipogon] Length = 476 Score = 67.8 bits (164), Expect = 2e-09 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 5/200 (2%) Frame = +3 Query: 3 QTSLLSKRWRNVWRSVSVLNFDEVEWXXXXXXXXXXXXVDTVLLLRDGSDIHKFKLFFAA 182 +T +L++RWR++W+SV+ L +W V +LL R + I +F+L A Sbjct: 116 RTCVLARRWRHLWKSVAALRITNWDWRKVVPMEEFRYFVHHLLLRRGRAPIDEFELDIAE 175 Query: 183 AHSGDSVQIERWIAYAIKRSVQVLDI-----AGVSIASPNLICLFGRVNTLDLGAIVLPG 347 D++++ RW +A+ +VL + G + NL + + LDL + L Sbjct: 176 LSDRDTLRVNRWFRHAVMCQARVLRLDIRVSRGSELELENLPVVSRHLQKLDLYGVKLM- 234 Query: 348 DENGNLILDLPILENLIIQSCDHCELISLTISGPKLKYLQLYNTFPEINYKTSIKISAVP 527 N P+L++L I CD + + IS +K+L + + T I VP Sbjct: 235 -HNFLDFSSCPVLQHLEIAGCDLSDSNARKISSLSIKHLNISGCNFSDTFHTHI---YVP 290 Query: 528 SLTSLKCIGYTYEDYTLENL 587 +L SL + Y + E + Sbjct: 291 NLLSLGLVNYMNQSPVFEGI 310