BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006151
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   574   e-161
emb|CBI34215.3| unnamed protein product [Vitis vinifera]              570   e-160
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   569   e-160
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...   563   e-158
ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic...   560   e-157

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  574 bits (1480), Expect = e-161
 Identities = 295/420 (70%), Positives = 325/420 (77%)
 Frame = -2

Query: 1261 MGVPAFYRWLAERYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 1082
            MGVPAFYRWLA+RYP ++ DV+EEE    +G    IDVS PNPN +EFD+ YLDMNGIIH
Sbjct: 1    MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57

Query: 1081 PCFHPEGKLAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXXX 902
            PCFHP+GK AP TYDDVFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQR     
Sbjct: 58   PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117

Query: 901  XXXXXXXXXXXXXXXXXXXXXEGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 722
                                 EGK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS
Sbjct: 118  AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177

Query: 721  RLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQHDLPGFNPNTRHCLYGLDADLIMLA 542
            RLNR PGW   KVILSDSNVPGEGEHKIMSY+R Q +L GFNPNTRHCLYGLDADLIML+
Sbjct: 178  RLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLS 237

Query: 541  LATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXTPIHK 362
            LATHEVHFSILRE+I  P Q  KC+ CG VGHLAAEC                  TPIHK
Sbjct: 238  LATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECR----------GIEVVDDTPIHK 287

Query: 361  KNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXVGNDFLPHMPTLEIREG 182
            K YQF+NI+VLREYL YDLEI NPPFEINFER           VGNDFLPHMPTLEIREG
Sbjct: 288  KKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREG 347

Query: 181  AITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASND 2
            AI LLMHVY+ EF+AMGGYLTDAGEVLL RVEHF+++ AV+EDQIFQKR+RI+QA  +N+
Sbjct: 348  AINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALENNE 407


>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  570 bits (1470), Expect = e-160
 Identities = 293/414 (70%), Positives = 321/414 (77%)
 Frame = -2

Query: 1261 MGVPAFYRWLAERYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 1082
            MGVPAFYRWLA+RYP ++ DV+EEE    +G    IDVS PNPN +EFD+ YLDMNGIIH
Sbjct: 1    MGVPAFYRWLADRYPLAVMDVVEEEPS--EGGAE-IDVSRPNPNGMEFDNLYLDMNGIIH 57

Query: 1081 PCFHPEGKLAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXXX 902
            PCFHP+GK AP TYDDVFKSIFDYIDHLFSLVRPR+LL+MAIDGVAPRAKMNQQR     
Sbjct: 58   PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117

Query: 901  XXXXXXXXXXXXXXXXXXXXXEGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 722
                                 EGK L+ KEKPETSDSNVITPGT+FMAVLSVALQYY+HS
Sbjct: 118  AAKDAAEAEAEEERLRKEFEVEGKMLSPKEKPETSDSNVITPGTKFMAVLSVALQYYIHS 177

Query: 721  RLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQHDLPGFNPNTRHCLYGLDADLIMLA 542
            RLNR PGW   KVILSDSNVPGEGEHKIMSY+R Q +L GFNPNTRHCLYGLDADLIML+
Sbjct: 178  RLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIMLS 237

Query: 541  LATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXTPIHK 362
            LATHEVHFSILRE+I  P Q  KC+ CG VGHLAAEC                  TPIHK
Sbjct: 238  LATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECR----------GIEVVDDTPIHK 287

Query: 361  KNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXVGNDFLPHMPTLEIREG 182
            K YQF+NI+VLREYL YDLEI NPPFEINFER           VGNDFLPHMPTLEIREG
Sbjct: 288  KKYQFLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREG 347

Query: 181  AITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQ 20
            AI LLMHVY+ EF+AMGGYLTDAGEVLL RVEHF+++ AV+EDQIFQKR+RI+Q
Sbjct: 348  AINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQ 401


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score =  569 bits (1466), Expect = e-160
 Identities = 285/421 (67%), Positives = 322/421 (76%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1261 MGVPAFYRWLAERYPRSITDVIEEE-EEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 1085
            MGVPAFYRWLA+RYP +I DV+EEE +E  +GV+  ID+S PNPN +EFD+ YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60

Query: 1084 HPCFHPEGKLAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXX 905
            HPCFHP+GK  P TYDDVFKSIFDYIDHLF+LVRPRKLLFMAIDGVAPRAKMNQQR    
Sbjct: 61   HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120

Query: 904  XXXXXXXXXXXXXXXXXXXXXXEGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVH 725
                                  EGK L+ KEKPETSDSNVITPGTQFMAVLS  LQYYV 
Sbjct: 121  RAAKDAAEAEAEEERLRKEFEAEGKLLSPKEKPETSDSNVITPGTQFMAVLSTGLQYYVQ 180

Query: 724  SRLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQHDLPGFNPNTRHCLYGLDADLIML 545
             RLN  PGWK  KVILSD+NVPGEGEHK+MSY+RLQ +L GFNPNTRHCLYGLDADLIML
Sbjct: 181  MRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADLIML 240

Query: 544  ALATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXTPIH 365
            ALATHE+HFSILRE++  P Q  KCF+CG  GHLAA+C  K                PIH
Sbjct: 241  ALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGK--PGDNPLDWNVEDDVPIH 298

Query: 364  KKNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXVGNDFLPHMPTLEIRE 185
            KK YQF+NI+VLREYL Y+L++ NPP EINFER           VGNDFLPHMPTLEIRE
Sbjct: 299  KKKYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPHMPTLEIRE 358

Query: 184  GAITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASN 5
            GAI LLMHVY+ EF+AMGGYLTDAGEV L RVEHF+Q+ A++E+QIFQKR+RI+Q   +N
Sbjct: 359  GAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLENN 418

Query: 4    D 2
            +
Sbjct: 419  E 419


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
            predicted protein [Populus trichocarpa]
          Length = 948

 Score =  563 bits (1450), Expect = e-158
 Identities = 287/421 (68%), Positives = 322/421 (76%), Gaps = 1/421 (0%)
 Frame = -2

Query: 1261 MGVPAFYRWLAERYPRSITDVIEEE-EEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGII 1085
            MGVPAFYRWLA+RYP SI DVIEEE +E  +G    IDVS PNPN +E+D+ YLDMNGII
Sbjct: 1    MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60

Query: 1084 HPCFHPEGKLAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXX 905
            HPCFHPEGK APATYDDVFKSIF YIDHLF+LVRPRKLLFMAIDGVAPRAKMNQQR    
Sbjct: 61   HPCFHPEGKPAPATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120

Query: 904  XXXXXXXXXXXXXXXXXXXXXXEGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVH 725
                                  EG  L+ KEKPET DSNVITPGTQFMAVLS+ALQYY+ 
Sbjct: 121  RAAKDAAQAEAEEERLRKEFEAEGVLLSVKEKPETRDSNVITPGTQFMAVLSIALQYYIQ 180

Query: 724  SRLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQHDLPGFNPNTRHCLYGLDADLIML 545
            SRLN  PGW+  KVILSD+NVPGEGEHKIMSY+RLQ ++PGFN NTRHCLYGLDADLIML
Sbjct: 181  SRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLIML 240

Query: 544  ALATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXTPIH 365
            +LATHEVHFSILRE++  P Q  KCF CG  GHLAAEC  K               TPIH
Sbjct: 241  SLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGK--QGDDALDWNVVDDTPIH 298

Query: 364  KKNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXVGNDFLPHMPTLEIRE 185
            KK YQF+NI+VLREYL YDL+I NPPF I+FE+           VGNDFLPHMPTLEIRE
Sbjct: 299  KKKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIRE 358

Query: 184  GAITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASN 5
            GAI LLMH+Y+ EF+AMGGYLT AGEV L +VEHF+Q+ AV+E+QIFQKR+RI+QA  +N
Sbjct: 359  GAINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENN 418

Query: 4    D 2
            +
Sbjct: 419  E 419


>ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
            gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4
            [Solanum lycopersicum]
          Length = 978

 Score =  560 bits (1444), Expect = e-157
 Identities = 286/420 (68%), Positives = 320/420 (76%)
 Frame = -2

Query: 1261 MGVPAFYRWLAERYPRSITDVIEEEEEILDGVLSVIDVSNPNPNNVEFDHFYLDMNGIIH 1082
            MGVPAFYRWLA+RYP SI D++EEE +  D V   +D+S PNPN +EFD+ YLDMNGIIH
Sbjct: 1    MGVPAFYRWLADRYPLSIVDMVEEEPK--DDV--PVDISKPNPNGMEFDNLYLDMNGIIH 56

Query: 1081 PCFHPEGKLAPATYDDVFKSIFDYIDHLFSLVRPRKLLFMAIDGVAPRAKMNQQRIXXXX 902
            PCFHPEGK APATY+DVF SIFDYIDHLFSLVRPRKLL+MAIDGVAPRAKMNQQR     
Sbjct: 57   PCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFR 116

Query: 901  XXXXXXXXXXXXXXXXXXXXXEGKSLTRKEKPETSDSNVITPGTQFMAVLSVALQYYVHS 722
                                 E   L   EKPETSDSNVITPGT FMAVLS+ALQYY+HS
Sbjct: 117  ASKDAAESEAEEKRLREEFEMEAAILVPTEKPETSDSNVITPGTPFMAVLSIALQYYIHS 176

Query: 721  RLNRIPGWKGIKVILSDSNVPGEGEHKIMSYMRLQHDLPGFNPNTRHCLYGLDADLIMLA 542
            RLN+  GW+  KVILSD+NVPGEGEHKIMSY+RLQ ++PGFNPNTRHCLYGLDADLIML+
Sbjct: 177  RLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIMLS 236

Query: 541  LATHEVHFSILREVIPLPWQLGKCFTCGLVGHLAAECHKKXXXXXXXXXXXXXXXTPIHK 362
            LATHEVHFSILREVI  P Q  KCF CG VGHLAA CH                 TPIHK
Sbjct: 237  LATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCH--GTNGNHGKDGKAVNDTPIHK 294

Query: 361  KNYQFINIFVLREYLYYDLEISNPPFEINFERXXXXXXXXXXXVGNDFLPHMPTLEIREG 182
            K YQF++I+VLREYL YDLEI NPPF+I+FER           VGNDFLPHMPTLEIREG
Sbjct: 295  KKYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREG 354

Query: 181  AITLLMHVYKCEFAAMGGYLTDAGEVLLGRVEHFVQAAAVFEDQIFQKRSRIEQAQASND 2
            AI LLM +Y+ +F  MGGYLTDAGEV L RVEHF+QAAAV+EDQIFQKR+RI+Q+  +N+
Sbjct: 355  AINLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNE 414