BLASTX nr result

ID: Coptis25_contig00006144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006144
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB07954.1| NAM-like protein -like [Oryza sativa Japonica Gr...   131   3e-28
gb|EEC75988.1| hypothetical protein OsI_13110 [Oryza sativa Indi...   129   2e-27
ref|XP_002337109.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-27
gb|EEC75881.1| hypothetical protein OsI_12916 [Oryza sativa Indi...   124   4e-26
tpg|DAA55391.1| TPA: hypothetical protein ZEAMMB73_386438 [Zea m...   122   2e-25

>dbj|BAB07954.1| NAM-like protein -like [Oryza sativa Japonica Group]
            gi|13161445|dbj|BAB33015.1| NAM-like protein -like [Oryza
            sativa Japonica Group]
          Length = 351

 Score =  131 bits (330), Expect = 3e-28
 Identities = 91/313 (29%), Positives = 147/313 (46%), Gaps = 17/313 (5%)
 Frame = -2

Query: 1103 FPVESEVSKQTAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQ 924
            FP     +       R  +FS  ED+ +  AWL    DPV+ +NQ    YW R+ E F +
Sbjct: 50   FPTAERTTVARPNQKRSKNFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHFYK 109

Query: 923  LMGGVTKRTSTSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEG 744
                   R+  S+  RW  I ++V+KFCG L+Q+E   + G++  ++I +A  V+  +EG
Sbjct: 110  TSKSTPDRSQNSLMHRWKTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVFKELEG 169

Query: 743  QPFKFESCWNILKGTPKW----EELWSTK-LNTKKAKPTLDVDVSATGLVXXXXXXXXXX 579
            +PF+F  CW++L+   KW    +++ S K   T + KP+ D    AT             
Sbjct: 170  KPFQFLHCWSLLRSQSKWHDKMKQITSQKPCATNRQKPSTDGSAKAT------------- 216

Query: 578  XXXXXXXXPFDSDVDPISLDDPSKERPIRRKVENERRIDEC----GHHMAKVDEANLVLK 411
                        D +P   ++P +    +R  E  RR + C     H   K  EA+   K
Sbjct: 217  PTNDETTNHVGEDNEPTETEEPKRPMGKKRAKEQLRRGETCTDAFDHLWEKKKEADAEKK 276

Query: 410  DFLTAFDARLKKSEEIALRELHLKEQKM--------LERKIEREQRVMDTDLNGMPPMQR 255
                  D R +KS E+  + L L ++K+        L+R +E E+R+M  D++  P  Q+
Sbjct: 277  ---KERDERHQKSYELDKQRLELDKKKVANETDEIQLKRMLE-EERIMKMDISSKPLSQQ 332

Query: 254  DYYTARQREILAR 216
             +Y + Q EI+AR
Sbjct: 333  QFYKSVQDEIIAR 345


>gb|EEC75988.1| hypothetical protein OsI_13110 [Oryza sativa Indica Group]
          Length = 351

 Score =  129 bits (324), Expect = 2e-27
 Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 17/313 (5%)
 Frame = -2

Query: 1103 FPVESEVSKQTAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQ 924
            FP     +       R  +FS  ED+ +  AWL    DPV+ +NQ    YW R+ E F +
Sbjct: 50   FPTAERTTVARPNQKRSKNFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHFYK 109

Query: 923  LMGGVTKRTSTSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEG 744
                    +  S+  RW  I ++V+KFCG L+Q+E   + G++  ++I +A  V+  +EG
Sbjct: 110  TSKSTPDSSQNSLMHRWKTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVFKELEG 169

Query: 743  QPFKFESCWNILKGTPKW----EELWSTK-LNTKKAKPTLDVDVSATGLVXXXXXXXXXX 579
            +PF+F  CW++L+   KW    +++ S K   T + KP+ D    AT             
Sbjct: 170  KPFQFLHCWSLLRSQSKWHDKMKQITSQKPCATNRQKPSTDGSAKAT------------- 216

Query: 578  XXXXXXXXPFDSDVDPISLDDPSKERPIRRKVENERRIDEC----GHHMAKVDEANLVLK 411
                        D +P   ++P +    +R  E  RR + C     H   K  EA+   K
Sbjct: 217  PTNDETTNHVGEDNEPTETEEPKRPMGKKRAKEQLRRGETCTDAFDHLWEKKKEADAEKK 276

Query: 410  DFLTAFDARLKKSEEIALRELHLKEQKM--------LERKIEREQRVMDTDLNGMPPMQR 255
                  D R +KS E+  + L L ++K+        L+R +E E+R+M  D++  P  Q+
Sbjct: 277  ---KERDERHQKSYELDKQRLELDKKKVANETDEIQLKRMLE-EERIMTMDISSKPLSQQ 332

Query: 254  DYYTARQREILAR 216
             +Y + Q EI+AR
Sbjct: 333  QFYKSVQDEIIAR 345


>ref|XP_002337109.1| predicted protein [Populus trichocarpa] gi|222838295|gb|EEE76660.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  128 bits (321), Expect = 4e-27
 Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 14/300 (4%)
 Frame = -2

Query: 1073 TAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQLMGGVTKRTS 894
            T  + R  +FS  ED  +  AWL T KDP+    Q  +  W RV   F +  G +  R+ 
Sbjct: 44   TKKSQRSKNFSPEEDCLLVSAWLNTSKDPITGVEQQTKQLWARVHAYFVENGGNLNNRSQ 103

Query: 893  TSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEGQPFKFESCWN 714
             S+  RW  I++ V KF GF+TQ+E   + G+TE  +IN+A ++Y S  G+ F+ E CW 
Sbjct: 104  ISISNRWQEINREVGKFVGFVTQIENRQQSGMTEESRINDALQMYASCVGKRFQLEHCWV 163

Query: 713  ILKGTPKWEELWSTKLNTKKAKPTLDVDVSATGLVXXXXXXXXXXXXXXXXXXPFDSDVD 534
            IL+  PKW+   +++      K    V+ S                          S  D
Sbjct: 164  ILRKEPKWQFERASQHQRSNKKQKSHVNASPASST--------------------PSTPD 203

Query: 533  PISLDDPS-----KERPIRRKVENERRIDECGHHMAKVDEANLV-----LKDFLTAFDAR 384
             +SL + S     K+RPI +K   ER   + G    KV E  +       +D L   + +
Sbjct: 204  SVSLGEDSEPLIYKDRPIGQKAAKERLKRKQGKD--KVGETTVTNILQQFRDTLVEIEDQ 261

Query: 383  LKKSEEIALRELHLKEQKMLER----KIEREQRVMDTDLNGMPPMQRDYYTARQREILAR 216
             K+  +I L +  +  Q+  E+    +IE+E+++M  D++ + P+   Y+  R+ EI+ +
Sbjct: 262  KKQDRKIMLEQQAMMIQQSQEKQELDRIEKEEQIMKMDISNLDPISAAYFQNRKLEIMQK 321


>gb|EEC75881.1| hypothetical protein OsI_12916 [Oryza sativa Indica Group]
          Length = 363

 Score =  124 bits (312), Expect = 4e-26
 Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 17/313 (5%)
 Frame = -2

Query: 1103 FPVESEVSKQTAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQ 924
            FP     +       R  +FS  +D+ +  AWL    DPV+ +NQ    YW R+ E F +
Sbjct: 62   FPTAERTTVARPNQKRSKNFSEQKDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHFYK 121

Query: 923  LMGGVTKRTSTSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEG 744
                   R+  S+  RW  I ++V+KFCG L+Q+E   + G++  ++I +A  V+  +EG
Sbjct: 122  TSKSTPDRSQNSLMHRWKTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVFKELEG 181

Query: 743  QPFKFESCWNILKGTPKW----EELWSTK-LNTKKAKPTLDVDVSATGLVXXXXXXXXXX 579
            +PF+F  C ++L+   KW    +++ S K   T + KP+ D    AT             
Sbjct: 182  KPFQFLHCRSLLRSQSKWHDKMKQITSQKPCATNRQKPSTDGSAKAT------------- 228

Query: 578  XXXXXXXXPFDSDVDPISLDDPSKERPIRRKVENERRIDEC----GHHMAKVDEANLVLK 411
                        D +P   ++P +    +R  E  RR + C     H   K  EA+   K
Sbjct: 229  PTNDETTNHVGEDNEPTETEEPKRPMGKKRAKEQLRRGETCTDAFDHLWEKKKEADAEKK 288

Query: 410  DFLTAFDARLKKSEEIALRELHLKEQKM--------LERKIEREQRVMDTDLNGMPPMQR 255
                  D R +KS E+  + L L ++K+        L+R +E E+R+M  D++  P  Q+
Sbjct: 289  ---KERDERHQKSYELDKQRLELDKKKVANETDEIQLKRMLE-EERIMTMDISSKPLSQQ 344

Query: 254  DYYTARQREILAR 216
             +Y + Q EI+AR
Sbjct: 345  QFYKSVQDEIIAR 357


>tpg|DAA55391.1| TPA: hypothetical protein ZEAMMB73_386438 [Zea mays]
          Length = 333

 Score =  122 bits (306), Expect = 2e-25
 Identities = 81/280 (28%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
 Frame = -2

Query: 1049 SFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQLMGGVTKRTSTSVQTRWC 870
            +F+V EDE +  A+L   KDP+I +NQ  + YW+R+ E F++       R+ +S+Q RW 
Sbjct: 51   NFTVSEDECLVSAYLNISKDPIIGTNQPIKGYWQRITEYFHEHKSTPYDRSQSSLQQRWG 110

Query: 869  RIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEGQPFKFESCWNILKGTPKW 690
             I +  S+FCGF  ++E   + GL   ++I EA  ++  + G PFKF  CW IL+   KW
Sbjct: 111  DIQKETSRFCGFYVEVERRKQSGLNVDDKIKEAMAMHERIVGTPFKFMHCWLILRHEMKW 170

Query: 689  EELWSTKLNTKKAKPTLDVDVSATGLVXXXXXXXXXXXXXXXXXXPFDSDVDPISLDDPS 510
              L  + +N   AK T   +   T ++                     S++   S     
Sbjct: 171  NALLDS-MNPTDAKET---EQKGTNIMEELLPPKIARPTGRDHDKNMKSNISSSSFTACI 226

Query: 509  KERPIRRKVENERRIDECGHHMAKVDEANLVLKDFLTAFDARLKKSEEIAL---RELHLK 339
                + +K+  E    E        +EA       +   D +L   EE+ +     L ++
Sbjct: 227  N---VLQKLSMEHGAFEERQDATSREEAT----HMVVRSDRKLALQEEVIIIQKASLEIQ 279

Query: 338  EQKMLERKIEREQRVMDTDLNGMPPMQRDYYTARQREILA 219
            +Q +  ++ ERE+RVM  D+N M P  R+YY  +Q++I A
Sbjct: 280  QQMLKLQEEEREERVMTMDVNKMEPWVREYYINKQKKIAA 319


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