BLASTX nr result

ID: Coptis25_contig00006139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006139
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|2...   248   3e-63
emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   248   3e-63
ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|2...   247   5e-63
ref|XP_002532192.1| conserved hypothetical protein [Ricinus comm...   244   3e-62
ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62

>ref|XP_002316037.1| predicted protein [Populus trichocarpa] gi|222865077|gb|EEF02208.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  248 bits (632), Expect = 3e-63
 Identities = 140/331 (42%), Positives = 200/331 (60%), Gaps = 1/331 (0%)
 Frame = +3

Query: 204  IYKVHEKFRKVNEYAYTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAE 383
            I +V E  R  NE AY P+ VSIGP+H  K  L+ ME+HK RYM  LLSR   LE  L +
Sbjct: 10   ICRVKENIRNANEKAYIPDKVSIGPYHHGKQGLETMEEHKWRYMDALLSRKPDLEASLDD 69

Query: 384  CVESIGKLEEKARKCYSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFN 563
            C+ ++ ++E +AR CY E  +  D D+F++MM+VDG FI+ELF K +  +  R ND +F 
Sbjct: 70   CLTALREVEHRARACYEEEINVTD-DEFLQMMLVDGCFIIELFLKYSIKSLRRRNDPVFT 128

Query: 564  NIWGMPSVVRDLILLENQLPMIVLDCLFEVVKESLG-GHSLNKLTLRFFNQLMPRDGEDA 740
                +  +  +L+LLENQ+P+ +L  LFEVV       HSL  L   FF  ++P D +  
Sbjct: 129  TPGMLFDLRSNLMLLENQIPLFILQRLFEVVPTPKQCTHSLATLAFHFFKYMIPGDPQIH 188

Query: 741  LQKYYSCHGKHLLDLFSKTFHPALPQHQQETKKKVELKHIPCVTELRQAGVKFKKGSTTG 920
             QK+    G H+LDL     H  LP++ +    K + KH  C TEL+ AG++ K+  T  
Sbjct: 189  QQKFNQ-EGNHILDLIC---HCLLPRYPRVPGTKSDQKHFRCATELQAAGIRIKRARTK- 243

Query: 921  SFVDIKFVDGVMEIPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYAFFMDNLINSPND 1100
            + +DIKFV GV+EIP +LI   T++L +NLIA E C      +ITSY F M +LI S  D
Sbjct: 244  NLLDIKFVSGVLEIPNVLIHQYTESLFKNLIALEHCSGDSVQHITSYVFLMKSLIGSDED 303

Query: 1101 VRILRRYKIITNCLGDDEDVSILFNKLCSEV 1193
            V++L++  I+TN   ++++V+ LF K C EV
Sbjct: 304  VKLLKKKDILTNYDVNEKEVAKLFEKSCEEV 334


>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  248 bits (632), Expect = 3e-63
 Identities = 166/392 (42%), Positives = 225/392 (57%), Gaps = 11/392 (2%)
 Frame = +3

Query: 51   KRMAENGADMNEQNGRDHVLIQISELNKVLAASIKIKLDKVSPSPSGKSCCIYKVHEKFR 230
            + +A   ++  E NG           + +LAASI  KL  ++  PS   CCIY+V +  R
Sbjct: 4    ENIASEQSERREANGN---------ADSLLAASINEKLSSLTSLPS--QCCIYRVPDTLR 52

Query: 231  KVNEYAYTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIGKLE 410
            +VNE A+ P ++SIGP H  K  L+ ME HK +Y+  LL R     T +   V+++ +LE
Sbjct: 53   RVNEEAFVPRILSIGPVHHGKKRLRDMEGHKWQYLKALLQRKPG--TMVERYVKAMRELE 110

Query: 411  EKARKCYSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFNNIWGMPSVV 590
             + R CY+E     D D+F+ MM++DG FI+ELF K+        +D IFN    +  + 
Sbjct: 111  ARTRGCYAEIIK-FDSDEFVTMMLLDGCFIIELFLKNKNKQLRDEDDPIFNRTMVLTDLH 169

Query: 591  RDLILLENQLPMIVLDCLFEVVK---ESLGGHSLNKLTLRFF-----NQLMPRDGEDALQ 746
            RDLILLENQLP  VL+ LF +++   +     S+ +LT  FF      +++ RD +  + 
Sbjct: 170  RDLILLENQLPFFVLETLFNLIENTDQEGPSTSVLELTYVFFKFLGLQEVLIRDSQPDV- 228

Query: 747  KYYSCHGKHLLDLFSKTFHPALPQHQQET-KKKVELKHIPCVTELRQAGVKFKKGSTTGS 923
                   KHLLDL    F P  P   + T K K EL  I  VTEL +AGVKF+ G T   
Sbjct: 229  -------KHLLDLLRLWFVP--PSSTKSTSKSKFEL--IRSVTELHEAGVKFRMG-TVSC 276

Query: 924  FVDIKFVDGVMEIPPILIQDQTDTLLRNLIASEQCYAGRST--YITSYAFFMDNLINSPN 1097
             ++IKF++GV+EIPP+ I+D TD+LL NLIA EQC   R T  YIT Y   M+ LINSP 
Sbjct: 277  LMEIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQC-CNRFTPHYITDYVILMEYLINSPK 335

Query: 1098 DVRILRRYKIITNCLGDDEDVSILFNKLCSEV 1193
            DV +L RY II N LGD+E VS LF KL  EV
Sbjct: 336  DVALLSRYGIINNLLGDNEGVSHLFKKLGKEV 367


>ref|XP_002335272.1| predicted protein [Populus trichocarpa] gi|222833186|gb|EEE71663.1|
            predicted protein [Populus trichocarpa]
          Length = 458

 Score =  247 bits (630), Expect = 5e-63
 Identities = 154/388 (39%), Positives = 223/388 (57%), Gaps = 7/388 (1%)
 Frame = +3

Query: 54   RMAENGADMNEQNGRDHVLIQISELNKVLAASIKIK---LDKVSPSPSGKS-CCIYKVHE 221
            R+  + +  N +   DHV   I+E ++    S++ K   L K+    +GKS CCI++V +
Sbjct: 6    RLIGDQSQENAETSNDHVT-SITEADRQWLKSVEKKTKLLPKLLKKSAGKSSCCIFRVPQ 64

Query: 222  KFRKVNEYAYTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIG 401
               ++N+ AY P +VSIGP+H  K+ L+ +E+HK R++  +L+RT      + +  ++I 
Sbjct: 65   SLVEINKKAYHPHIVSIGPYHHGKVHLKMIEEHKWRFLGGVLARTQQHGIGINDFFKAIA 124

Query: 402  KLEEKARKCYSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFNNIWGMP 581
             +EEK R CYSE T    R +FIEMMV+DG FI+ELF    G+ +   +D IFN      
Sbjct: 125  PIEEKIRDCYSE-TIECSRQEFIEMMVLDGCFIIELFCIIGGIVQRDIDDPIFNMTLMFF 183

Query: 582  SVVRDLILLENQLPMIVLDCLFEVVKESLGGH---SLNKLTLRFFNQLMPRDGEDALQKY 752
             ++RDL+ LENQ+P  VL+ LFE    S       SL +L L+FF+    R  E  L++Y
Sbjct: 184  FIMRDLLKLENQIPFFVLETLFETSILSSRKQIVSSLTELALKFFDHAAERPPE-VLRRY 242

Query: 753  YSCHGKHLLDLFSKTFHPALPQHQQETKKKVELKHIPCVTELRQAGVKFKKGSTTGSFVD 932
                G+HLLDLF  T  PA  Q         +L H     +L QAG+KFK   T  SF+D
Sbjct: 243  KDIRGEHLLDLFRSTIIPASSQEVHRKISPFQLIH--SAKKLHQAGIKFKPRETD-SFLD 299

Query: 933  IKFVDGVMEIPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYAFFMDNLINSPNDVRIL 1112
            I+F +GV+EIP + I D   +++ N +A EQCY   S +ITSY  FM  LIN+P+D   L
Sbjct: 300  IEFSNGVLEIPLLTIDDFITSVILNCVAFEQCYNHCSNHITSYVTFMGCLINAPSDAGFL 359

Query: 1113 RRYKIITNCLGDDEDVSILFNKLCSEVT 1196
              YKI+ N  G DE+V+  FN +  +VT
Sbjct: 360  CDYKIVENSFGADEEVASFFNNIGKDVT 387


>ref|XP_002532192.1| conserved hypothetical protein [Ricinus communis]
            gi|223528124|gb|EEF30195.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 461

 Score =  244 bits (623), Expect = 3e-62
 Identities = 149/379 (39%), Positives = 219/379 (57%), Gaps = 7/379 (1%)
 Frame = +3

Query: 81   NEQNGR--DHVLIQISELNKVLAA-SIKI-KLDKVSPSPSGKS-CCIYKVHEKFRKVNEY 245
            N +NG+  DHV+   +E ++ LA+   KI K+ K+    +GKS CCI++V +   ++NE 
Sbjct: 12   NHENGKTSDHVIAISTEASEWLASLEDKISKMPKLLNKTAGKSSCCIFRVPKSLAQINEK 71

Query: 246  AYTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIGKLEEKARK 425
            AY P +VSIGP+H      Q +E+HK R++  +L+RT + +  L +  ++I   EE+ R+
Sbjct: 72   AYQPHIVSIGPYHHGNDQFQMIEEHKWRFLGAVLTRTKAKDISLDDFFKAIAPKEEEIRE 131

Query: 426  CYSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFNNIWGMPSVVRDLIL 605
            CYSE   +    + IEMM++DG FI+EL    A + +   +D IFN  W    ++RDL+ 
Sbjct: 132  CYSENIGYSSH-QLIEMMILDGCFIIELLCIVARLVQTHLDDPIFNMAWMFSFLMRDLLR 190

Query: 606  LENQLPMIVLDCLFEVVKESL--GGHSLNKLTLRFFNQLMPRDGEDALQKYYSCHGKHLL 779
            LENQ+P  VL+ LF +V  +L     SL +L L FF+  + R  E  L ++    GKHLL
Sbjct: 191  LENQIPFFVLESLFGLVSVTLDDSSRSLTELALEFFDYAVERPAE-FLDRFKDKKGKHLL 249

Query: 780  DLFSKTFHPALPQHQQETKKKVELKHIPCVTELRQAGVKFKKGSTTGSFVDIKFVDGVME 959
            DLF  TF P       E      L+ I    +LR +G+KFK    T SF+DI F  GV+ 
Sbjct: 250  DLFRSTFIPPPQGKPNEDAYSPFLQLIQSAKKLRLSGIKFKP-KRTDSFLDISFSHGVLR 308

Query: 960  IPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYAFFMDNLINSPNDVRILRRYKIITNC 1139
            IPP+ + D T + L N +A EQCY   S +ITSY  FM  LIN+P D   L  ++II N 
Sbjct: 309  IPPLTVDDFTSSFLLNCVAFEQCYKHCSKHITSYVTFMGCLINTPADAGYLSDHRIIENY 368

Query: 1140 LGDDEDVSILFNKLCSEVT 1196
             G D++V+  FN +  ++T
Sbjct: 369  FGTDDEVAKFFNDVGKDIT 387


>ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1|
            predicted protein [Populus trichocarpa]
          Length = 458

 Score =  244 bits (623), Expect = 3e-62
 Identities = 153/381 (40%), Positives = 221/381 (58%), Gaps = 9/381 (2%)
 Frame = +3

Query: 81   NEQNGRDHVLIQISELNKVLAASIKIK---LDKVSPSPSGKS-CCIYKVHEKFRKVNEYA 248
            N     DHV   I+E ++    S++ K   L K+  + +GKS CCI++V +   ++N+ A
Sbjct: 15   NAGTSDDHVT-SITEADRQWLKSVETKTKLLPKLLNNSAGKSSCCIFRVPQSLFEINKMA 73

Query: 249  YTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIGKLEEKARKC 428
            Y P +VSIGP+H  K+ L+ +E+HK R++  +L+RT      + +  ++I  +EEK R C
Sbjct: 74   YQPHIVSIGPYHHGKVHLKMIEEHKWRFLGGVLARTQQHGIGINDFFKAIAPIEEKIRDC 133

Query: 429  YSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFNNIWGMPSVVRDLILL 608
            YSE T    R +FIEMMV+DG FI+ELF    G+ +   +D IFN       ++RDL+ L
Sbjct: 134  YSE-TIECSRQEFIEMMVLDGCFIIELFCIVGGIVQTDIDDPIFNMTRMFFFIMRDLLRL 192

Query: 609  ENQLPMIVLDCLFE---VVKESLGGHSLNKLTLRFFNQLMPRDGEDALQKYYSCHGKHLL 779
            ENQ+P  VL+ LFE   +        S  +L L FF+    R  E  L++Y    GKHLL
Sbjct: 193  ENQIPFFVLETLFETSILSSRKQNVSSFAELALEFFDYAAQRPPE-VLRRYKDIRGKHLL 251

Query: 780  DLFSKTFHPALPQHQQETKKKVE--LKHIPCVTELRQAGVKFKKGSTTGSFVDIKFVDGV 953
            DLF  T  P+     QE   K+   L+ I    +L QAG+KFK   T  SF+DI+F +GV
Sbjct: 252  DLFRSTIIPS----SQEVPGKISPFLQLIQSAKKLHQAGIKFKPRETD-SFLDIEFSNGV 306

Query: 954  MEIPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYAFFMDNLINSPNDVRILRRYKIIT 1133
            +EIP + + D T +++ N +A EQCY   S +ITSY  FM  LIN+P+D   L  YKI+ 
Sbjct: 307  LEIPLLTVDDFTTSVILNCVAFEQCYNHCSNHITSYVTFMGCLINAPSDAGFLCDYKIVE 366

Query: 1134 NCLGDDEDVSILFNKLCSEVT 1196
            N  G DE+V+  FN +  +VT
Sbjct: 367  NYFGTDEEVARFFNNVGKDVT 387


Top