BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006135
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   327   2e-87
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   327   2e-87
ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containi...   315   7e-84
ref|XP_002303271.1| predicted protein [Populus trichocarpa] gi|2...   315   7e-84
gb|AFK43832.1| unknown [Lotus japonicus]                              311   6e-83

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
            [Vitis vinifera]
          Length = 593

 Score =  327 bits (837), Expect = 2e-87
 Identities = 161/234 (68%), Positives = 191/234 (81%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3    GLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGIVDVLGKCGYVTE 182
            GL+PNE+TFLAV + C SA+A+EE F+HF+ MK EYGI+P+ EHYVGI+DVLGK G+V E
Sbjct: 344  GLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIE 403

Query: 183  AEEYVEKMPFEPTVEIWEALMKVARVHGDIDLEDRAEELMVGLVPSMANXXXXXXXXXXX 362
            A+E++E+MP EP+  +WEALM  A++HGDIDLED AEELMV L P  A            
Sbjct: 404  AKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKK 463

Query: 363  RSAISLLDGKNRVNEYRHLPPYKNEEK------PKEQGYVPDTRYVLHDIDQEAKEQALL 524
            R+AI++LDGKNR++E+R+   YK++EK       KE GYVPDTRYVLHDIDQEAKEQALL
Sbjct: 464  RTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVLHDIDQEAKEQALL 523

Query: 525  YHSERLAIAYGLISTPARMPLRIIKNLRICGDCHNAIKIMAKIVGRELIVRDNK 686
            YHSERLAIAYGLISTPAR PLRIIKNLR+CGDCHNAIKIM+KIVGRELIVRDNK
Sbjct: 524  YHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNK 577


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  327 bits (837), Expect = 2e-87
 Identities = 161/234 (68%), Positives = 191/234 (81%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3    GLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGIVDVLGKCGYVTE 182
            GL+PNE+TFLAV + C SA+A+EE F+HF+ MK EYGI+P+ EHYVGI+DVLGK G+V E
Sbjct: 378  GLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIE 437

Query: 183  AEEYVEKMPFEPTVEIWEALMKVARVHGDIDLEDRAEELMVGLVPSMANXXXXXXXXXXX 362
            A+E++E+MP EP+  +WEALM  A++HGDIDLED AEELMV L P  A            
Sbjct: 438  AKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKK 497

Query: 363  RSAISLLDGKNRVNEYRHLPPYKNEEK------PKEQGYVPDTRYVLHDIDQEAKEQALL 524
            R+AI++LDGKNR++E+R+   YK++EK       KE GYVPDTRYVLHDIDQEAKEQALL
Sbjct: 498  RTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGMKEAGYVPDTRYVLHDIDQEAKEQALL 557

Query: 525  YHSERLAIAYGLISTPARMPLRIIKNLRICGDCHNAIKIMAKIVGRELIVRDNK 686
            YHSERLAIAYGLISTPAR PLRIIKNLR+CGDCHNAIKIM+KIVGRELIVRDNK
Sbjct: 558  YHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNK 611


>ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Cucumis sativus]
          Length = 688

 Score =  315 bits (806), Expect = 7e-84
 Identities = 157/234 (67%), Positives = 187/234 (79%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3    GLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGIVDVLGKCGYVTE 182
            GL+PN +TFL V +AC SA+A+EE FL+F+ MKN+Y I+P   HY+G++ +LG+ G++ E
Sbjct: 439  GLQPNSQTFLYVMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGHIHE 498

Query: 183  AEEYVEKMPFEPTVEIWEALMKVARVHGDIDLEDRAEELMVGLVPSMANXXXXXXXXXXX 362
            A EYVEK+P EPTVE+WE L   AR+HGD+DLED AEEL+V L P+ A            
Sbjct: 499  AFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKK 558

Query: 363  RSAISLLDGKNRVNEYRHLPPYKNEEK------PKEQGYVPDTRYVLHDIDQEAKEQALL 524
            RSAIS+LDGKNR+ E+R+   YK++EK       KEQGYVPDTRYVLHDIDQEAKEQALL
Sbjct: 559  RSAISMLDGKNRIVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALL 618

Query: 525  YHSERLAIAYGLISTPARMPLRIIKNLRICGDCHNAIKIMAKIVGRELIVRDNK 686
            YHSERLAIAYGLISTPAR PLRIIKNLRICGDCHNAIKIM++IVGRELIVRDNK
Sbjct: 619  YHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNK 672


>ref|XP_002303271.1| predicted protein [Populus trichocarpa] gi|222840703|gb|EEE78250.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  315 bits (806), Expect = 7e-84
 Identities = 161/234 (68%), Positives = 186/234 (79%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3   GLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGIVDVLGKCGYVTE 182
           GL+P  +TF AV +AC SA+A+EE FL+F+ M  E+GISP++EHY+ I+DVLGK  Y+ E
Sbjct: 85  GLEPTGETFHAVLSACASAEAVEEGFLYFEEMSREFGISPTLEHYLSIIDVLGKSAYLNE 144

Query: 183 AEEYVEKMPFEPTVEIWEALMKVARVHGDIDLEDRAEELMVGLVPSMANXXXXXXXXXXX 362
           A EY+EK+PFEPTVEIWEAL K AR HGDIDLED AEEL+V L  S A            
Sbjct: 145 AVEYIEKLPFEPTVEIWEALRKYARSHGDIDLEDHAEELIVSLDSSKAVANKIPTPPPKK 204

Query: 363 RSAISLLDGKNRVNEYRHLPPYKNEEKPKEQ------GYVPDTRYVLHDIDQEAKEQALL 524
            + IS+L+GKNRV E+R+   YK++EK KE       GYVPDTRYVLHDIDQEAKEQALL
Sbjct: 205 YNLISMLEGKNRVAEFRNPTFYKDDEKLKELREMKTGGYVPDTRYVLHDIDQEAKEQALL 264

Query: 525 YHSERLAIAYGLISTPARMPLRIIKNLRICGDCHNAIKIMAKIVGRELIVRDNK 686
           YHSERLAIAYGLISTPARMPLRIIKNLR+CGDCHNAIKIM+KIVGRELIVRDNK
Sbjct: 265 YHSERLAIAYGLISTPARMPLRIIKNLRVCGDCHNAIKIMSKIVGRELIVRDNK 318


>gb|AFK43832.1| unknown [Lotus japonicus]
          Length = 295

 Score =  311 bits (798), Expect = 6e-83
 Identities = 153/234 (65%), Positives = 184/234 (78%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3   GLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGIVDVLGKCGYVTE 182
           GL+   +T LAV +ACGSA+A+E+ FLHFD MK++YGI P VEHY+G++DVLG+ GY+ E
Sbjct: 46  GLEITSETLLAVLSACGSAEAVEDAFLHFDSMKSKYGIEPGVEHYMGLLDVLGQSGYLKE 105

Query: 183 AEEYVEKMPFEPTVEIWEALMKVARVHGDIDLEDRAEELMVGLVPSMANXXXXXXXXXXX 362
           AEE++EK+PFEPT+ +WE L   AR+HGDIDLED  EELMV L PS A            
Sbjct: 106 AEEFIEKLPFEPTLTVWETLKNYARIHGDIDLEDHVEELMVNLDPSKAVANKIPTPPPKK 165

Query: 363 RSAISLLDGKNRVNEYRHLPPYKNEEK------PKEQGYVPDTRYVLHDIDQEAKEQALL 524
            + IS+LDG+NR+ EY++   YK++EK       K+ GYVPDTRYVLHDIDQEAK QALL
Sbjct: 166 YNHISMLDGRNRIIEYKNPSLYKDDEKLKALIGMKDAGYVPDTRYVLHDIDQEAKGQALL 225

Query: 525 YHSERLAIAYGLISTPARMPLRIIKNLRICGDCHNAIKIMAKIVGRELIVRDNK 686
           YHSERLAIAYGLISTP R PLRIIKNLR+CGDCHNAIKIM++IVGRELIVRDNK
Sbjct: 226 YHSERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNK 279