BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006130
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519707.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-107
ref|NP_001241416.1| uncharacterized protein LOC100797399 [Glycin...   391   e-106
ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|1946...   391   e-106
ref|XP_003540735.1| PREDICTED: 60S ribosomal protein L7a-like [G...   391   e-106
ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [S...   391   e-106

>ref|XP_003519707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 554

 Score =  392 bits (1007), Expect = e-107
 Identities = 198/269 (73%), Positives = 209/269 (77%)
 Frame = +2

Query: 50   HNLKTCLQKMAPKRGLKAPAXXXXXXXXXXXXNPLFEKRAKQFGIGGALPPKKDLHRFVK 229
            H        MAPK+G K               NPLFEKR KQFGIGGALPPK+DL RFVK
Sbjct: 286  HTFSVATTTMAPKKGAKGGVVAAKKKVQEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVK 345

Query: 230  WPXXXXXXXXXXXXXXXXXXPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXX 409
            WP                  PPALNQFTKTLDKNLATNLFKMLLKYRPED          
Sbjct: 346  WPKNVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLLK 405

Query: 410  XXXXESEGKTVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM 589
                E++GK VE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM
Sbjct: 406  RAQAEADGKPVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKM 465

Query: 590  EIPYCIVKGKARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKW 769
            EIPYCIVKGKARLG IVHKKTASVLCLT+VKNEDKMEFS+ILEAIKANFNDKYDEYRKKW
Sbjct: 466  EIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKW 525

Query: 770  GGGIMGSKSQAKTKAKERLIAKEAAQRMN 856
            GGGIMGSKSQAKT+AKE+L+AKEAAQRMN
Sbjct: 526  GGGIMGSKSQAKTRAKEKLLAKEAAQRMN 554


>ref|NP_001241416.1| uncharacterized protein LOC100797399 [Glycine max]
           gi|255638035|gb|ACU19332.1| unknown [Glycine max]
          Length = 260

 Score =  391 bits (1005), Expect = e-106
 Identities = 197/260 (75%), Positives = 209/260 (80%)
 Frame = +2

Query: 77  MAPKRGLKAPAXXXXXXXXXXXXNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 256
           MAPK+G+K               NPLFEKR KQFGIGGALPPK+DL RFVKWP       
Sbjct: 1   MAPKKGVKGSVVAAKKKVQEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKNVQIQR 60

Query: 257 XXXXXXXXXXXPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXXESEGK 436
                      PPALNQFTKTLDKNLATNLFKMLLKYRPED              E++GK
Sbjct: 61  KKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLLKRAQAEADGK 120

Query: 437 TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 616
            VE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG
Sbjct: 121 PVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 180

Query: 617 KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 796
           KARLG IVHKKTASVLCLT+VKNEDKMEFS+ILEAIKANFNDKYDEYRKKWGGGIMGSKS
Sbjct: 181 KARLGTIVHKKTASVLCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKS 240

Query: 797 QAKTKAKERLIAKEAAQRMN 856
           QAKT+AKE+L+AKEAAQRMN
Sbjct: 241 QAKTRAKEKLLAKEAAQRMN 260


>ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|194699752|gb|ACF83960.1|
           unknown [Zea mays] gi|195607614|gb|ACG25637.1| 60S
           ribosomal protein L7a [Zea mays]
           gi|414589924|tpg|DAA40495.1| TPA: 60S ribosomal protein
           L7a [Zea mays]
          Length = 258

 Score =  391 bits (1005), Expect = e-106
 Identities = 199/259 (76%), Positives = 211/259 (81%)
 Frame = +2

Query: 77  MAPKRGLKAPAXXXXXXXXXXXXNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 256
           MAPKRG +AP             NPLFEKR KQFGIGGALPPKKDLHRFVKWP       
Sbjct: 1   MAPKRGGRAPVPAKKKTDKVT--NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQR 58

Query: 257 XXXXXXXXXXXPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXXESEGK 436
                      PPALNQFT+TLDKNLATNLFKMLLKYRPED              E+EGK
Sbjct: 59  QRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAENEGK 118

Query: 437 TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 616
           TVESKKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKG
Sbjct: 119 TVESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178

Query: 617 KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 796
           KARLG+IVHKKTASVLCLT+VKNEDK+EFSKILEAIKANFNDK+DE RKKWGGGIMGSKS
Sbjct: 179 KARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKS 238

Query: 797 QAKTKAKERLIAKEAAQRM 853
           QAKTKA+E+L+AKEAAQRM
Sbjct: 239 QAKTKAREKLLAKEAAQRM 257


>ref|XP_003540735.1| PREDICTED: 60S ribosomal protein L7a-like [Glycine max]
          Length = 259

 Score =  391 bits (1004), Expect = e-106
 Identities = 198/260 (76%), Positives = 212/260 (81%)
 Frame = +2

Query: 77  MAPKRGLKAPAXXXXXXXXXXXXNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 256
           MAPKRG KAPA            NPLFEKR KQFGIGGALPPK+DL RFVKWP       
Sbjct: 1   MAPKRGGKAPALAAKKKPEKVS-NPLFEKRPKQFGIGGALPPKRDLTRFVKWPKNVQIQR 59

Query: 257 XXXXXXXXXXXPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXXESEGK 436
                      PPALNQFTKTLDKNLAT+LFK+LLKYRPED              E+EGK
Sbjct: 60  KKRILKQRLKVPPALNQFTKTLDKNLATSLFKLLLKYRPEDKAEKKERLLKRAQAEAEGK 119

Query: 437 TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 616
           TVE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG
Sbjct: 120 TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 179

Query: 617 KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 796
           KARLG +VHKKTASVLCLT+VKNEDK+EFS++LEAIKANFNDKYDEYRKKWGGGIMGSKS
Sbjct: 180 KARLGTVVHKKTASVLCLTTVKNEDKLEFSRVLEAIKANFNDKYDEYRKKWGGGIMGSKS 239

Query: 797 QAKTKAKERLIAKEAAQRMN 856
           QAKT+AKE+L+AKEAAQRMN
Sbjct: 240 QAKTRAKEKLLAKEAAQRMN 259


>ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [Sorghum bicolor]
           gi|242049790|ref|XP_002462639.1| hypothetical protein
           SORBIDRAFT_02g029400 [Sorghum bicolor]
           gi|241926014|gb|EER99158.1| hypothetical protein
           SORBIDRAFT_02g029380 [Sorghum bicolor]
           gi|241926016|gb|EER99160.1| hypothetical protein
           SORBIDRAFT_02g029400 [Sorghum bicolor]
          Length = 258

 Score =  391 bits (1004), Expect = e-106
 Identities = 199/259 (76%), Positives = 211/259 (81%)
 Frame = +2

Query: 77  MAPKRGLKAPAXXXXXXXXXXXXNPLFEKRAKQFGIGGALPPKKDLHRFVKWPXXXXXXX 256
           MAPKRG +AP             NPLFEKR KQFGIGGALPPKKDLHRFVKWP       
Sbjct: 1   MAPKRGGRAPVPAKKKTDKVV--NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQR 58

Query: 257 XXXXXXXXXXXPPALNQFTKTLDKNLATNLFKMLLKYRPEDXXXXXXXXXXXXXXESEGK 436
                      PPALNQFT+TLDKNLATNLFKMLLKYRPED              E+EGK
Sbjct: 59  QRRILKQRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPEDKAAKKERLLKRAQAETEGK 118

Query: 437 TVESKKPIVVKYGLNHITYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 616
           TVE+KKPIVVKYGLNH+TYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKG
Sbjct: 119 TVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKG 178

Query: 617 KARLGAIVHKKTASVLCLTSVKNEDKMEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKS 796
           KARLG+IVHKKTASVLCLT+VKNEDK+EFSKILEAIKANFNDK+DE RKKWGGGIMGSKS
Sbjct: 179 KARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGIMGSKS 238

Query: 797 QAKTKAKERLIAKEAAQRM 853
           QAKTKA+E+LIAKEAAQRM
Sbjct: 239 QAKTKAREKLIAKEAAQRM 257