BLASTX nr result
ID: Coptis25_contig00006109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006109
(812 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum] 291 3e-92
ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife... 289 2e-91
ref|XP_002527764.1| eukaryotic translation initiation factor 2c,... 283 2e-88
gb|AFV15381.1| AGO4A [Solanum lycopersicum] 286 3e-88
ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo... 275 1e-85
>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
Length = 933
Score = 291 bits (744), Expect(2) = 3e-92
Identities = 150/226 (66%), Positives = 165/226 (73%), Gaps = 34/226 (15%)
Frame = +3
Query: 237 GSGSLDEGDC---KRFRRPFQSKTFKVAISFTAKIPMKAIALALH--------------- 362
G+ S D GD KR RRPF SKTFKV ISF AKIPM+AIA AL
Sbjct: 174 GNASPDAGDGNDRKRMRRPFHSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLD 233
Query: 363 ----------------QSFFHNKPCNFCDLGGGALGCRGFHSSFRATHGGLSLNIDVSTT 494
QSFFHN NF DLGGG +GCRGFHSSFR T GGLSLN+DVSTT
Sbjct: 234 IILRQHAAKQGCLLVRQSFFHNDAKNFADLGGGVVGCRGFHSSFRTTQGGLSLNVDVSTT 293
Query: 495 MIIQPGPVVDFLIANQNVRDPYGIDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCNQQ 674
MI+QPGPVVDFLIANQN RDP+ +DWAKAKRTLKNLRIK SP+NTEYKITGLSE C +Q
Sbjct: 294 MIVQPGPVVDFLIANQNARDPFSLDWAKAKRTLKNLRIKTSPANTEYKITGLSEKPCKEQ 353
Query: 675 LFSLKQKNGNANGDVQTVEVTVSDYFVNYRNIQLRYSGDLPCINVG 812
+FSLKQK+GN NG+ +T+EVTV DYFVNYR I+LRYSGDLPCINVG
Sbjct: 354 MFSLKQKSGNENGEAETLEVTVYDYFVNYRKIELRYSGDLPCINVG 399
Score = 74.7 bits (182), Expect(2) = 3e-92
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +1
Query: 1 DTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLEDLSSNR 123
DTEL GK FAYDGEK+LFTVGPLP+NKH+F VVLED+SSNR
Sbjct: 131 DTELAGKDFAYDGEKSLFTVGPLPRNKHEFIVVLEDVSSNR 171
>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
gi|296083994|emb|CBI24382.3| unnamed protein product
[Vitis vinifera]
Length = 913
Score = 289 bits (740), Expect(2) = 2e-91
Identities = 151/229 (65%), Positives = 167/229 (72%), Gaps = 32/229 (13%)
Frame = +3
Query: 222 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALALH------------- 362
NG P GS +E D KR RRP+QSKTFKV ISF AKIPM+AIA AL
Sbjct: 153 NGSPD-RGSPNESDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRV 211
Query: 363 ------------------QSFFHNKPCNFCDLGGGALGCRGFHSSFRATHGGLSLNIDVS 488
QSFFHN P NF DLGGG LGCRGFHSSFR T GGLSLNIDVS
Sbjct: 212 LDIILRQHASKQGCLLVRQSFFHNDPKNFIDLGGGVLGCRGFHSSFRTTQGGLSLNIDVS 271
Query: 489 TTMIIQPGPVVDFLIANQNVRDPYGIDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCN 668
TTMI+QPGPVVDFLIANQN RDP+ +DWAKAK+ LKNLR+K SPSNTEYKITGLSE C
Sbjct: 272 TTMIVQPGPVVDFLIANQNARDPFSLDWAKAKKMLKNLRVKTSPSNTEYKITGLSEKPCK 331
Query: 669 QQLFSLKQKNG-NANGDVQTVEVTVSDYFVNYRNIQLRYSGDLPCINVG 812
+QLF+LKQ+NG + NG+ QT+EVTV DYFVN+R I+LRYS DLPCINVG
Sbjct: 332 EQLFTLKQRNGKDENGEAQTIEVTVFDYFVNHRRIELRYSADLPCINVG 380
Score = 73.6 bits (179), Expect(2) = 2e-91
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 1 DTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLEDLSSNR 123
D+ELGGK FAYDGEK+LFTVGPLP+NK +FTVVLED+SSNR
Sbjct: 109 DSELGGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVSSNR 149
>ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus
communis] gi|223532851|gb|EEF34625.1| eukaryotic
translation initiation factor 2c, putative [Ricinus
communis]
Length = 921
Score = 283 bits (725), Expect(2) = 2e-88
Identities = 149/228 (65%), Positives = 163/228 (71%), Gaps = 31/228 (13%)
Frame = +3
Query: 222 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALALH------------- 362
N P G GS +EGD KR RRP+QSKTFKV ISF AKIPM+AIA AL
Sbjct: 164 NASPDGHGSPNEGDRKRMRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEAIRV 223
Query: 363 ------------------QSFFHNKPCNFCDLGGGALGCRGFHSSFRATHGGLSLNIDVS 488
Q+FFHN P NF D+GGG LGCRGFHSSFR T GGLSLNIDVS
Sbjct: 224 LDIILRQHAAKQGCLLVRQNFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVS 283
Query: 489 TTMIIQPGPVVDFLIANQNVRDPYGIDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCN 668
TTMIIQPGPVVDFLIANQNVRDP+ +DWAKAKRTLKNLRIKASPSN EYKITGLSE+ C
Sbjct: 284 TTMIIQPGPVVDFLIANQNVRDPFQLDWAKAKRTLKNLRIKASPSNQEYKITGLSEMPCK 343
Query: 669 QQLFSLKQKNGNANGDVQTVEVTVSDYFVNYRNIQLRYSGDLPCINVG 812
+Q F L QK + N +E+TV DYFVN+R I+LRYSGDLPCINVG
Sbjct: 344 EQTFQLNQKGRDDN---DPLELTVYDYFVNHRRIELRYSGDLPCINVG 388
Score = 68.9 bits (167), Expect(2) = 2e-88
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +1
Query: 1 DTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLEDLSSNR 123
D+E+GGK FAYDGEK+LFTVG LP+NK +FTVVLED++SNR
Sbjct: 120 DSEMGGKKFAYDGEKSLFTVGALPRNKLEFTVVLEDVTSNR 160
>gb|AFV15381.1| AGO4A [Solanum lycopersicum]
Length = 909
Score = 286 bits (731), Expect(2) = 3e-88
Identities = 146/228 (64%), Positives = 164/228 (71%), Gaps = 31/228 (13%)
Frame = +3
Query: 222 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALALH------------- 362
N P G GS +E D KR RRP+QSKTFKV ISF AKIPM+AIA AL
Sbjct: 150 NSSPGGHGSPNEADRKRLRRPYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRV 209
Query: 363 ------------------QSFFHNKPCNFCDLGGGALGCRGFHSSFRATHGGLSLNIDVS 488
QSFFHN P NF D+G G LGCRGFHSSFR T GLSLNIDVS
Sbjct: 210 LDIILRQHAAKQGCLLVRQSFFHNDPKNFVDVGAGVLGCRGFHSSFRTTQSGLSLNIDVS 269
Query: 489 TTMIIQPGPVVDFLIANQNVRDPYGIDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCN 668
TTMIIQPGPVVDFLIANQN +DP+ +DWAKAKR LKNLR+K +P+N EYKITGLS+ C
Sbjct: 270 TTMIIQPGPVVDFLIANQNAKDPFSLDWAKAKRVLKNLRVKTTPTNQEYKITGLSDRPCR 329
Query: 669 QQLFSLKQKNGNANGDVQTVEVTVSDYFVNYRNIQLRYSGDLPCINVG 812
+QLF+LKQK +A+G+VQT EVTV DYFVN+RNI+LRYS DLPCINVG
Sbjct: 330 EQLFTLKQKGKDADGEVQTTEVTVFDYFVNHRNIELRYSADLPCINVG 377
Score = 66.2 bits (160), Expect(2) = 3e-88
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = +1
Query: 1 DTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLEDLSSNR 123
DTEL GK FAYDGEK+LFT+G LP+NK +FTVVL+D+ SNR
Sbjct: 106 DTELAGKDFAYDGEKSLFTIGALPRNKMEFTVVLDDVISNR 146
>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
sativus]
Length = 915
Score = 275 bits (702), Expect(2) = 1e-85
Identities = 144/228 (63%), Positives = 160/228 (70%), Gaps = 31/228 (13%)
Frame = +3
Query: 222 NGCPKGSGSLDEGDCKRFRRPFQSKTFKVAISFTAKIPMKAIALALH------------- 362
N P G GS + GD KR +RP++SK+FKV ISF AKIPM+AIA AL
Sbjct: 158 NCSPDGHGSPNNGDRKRMKRPYRSKSFKVEISFAAKIPMQAIASALRGQESENFQEAIRV 217
Query: 363 ------------------QSFFHNKPCNFCDLGGGALGCRGFHSSFRATHGGLSLNIDVS 488
QSFFHN P + D+GGG LGCRGFHSSFR T GLSLNIDVS
Sbjct: 218 LDIILRQNASKQGCLLVRQSFFHNDPNSCTDVGGGVLGCRGFHSSFRTTQSGLSLNIDVS 277
Query: 489 TTMIIQPGPVVDFLIANQNVRDPYGIDWAKAKRTLKNLRIKASPSNTEYKITGLSELTCN 668
TTMIIQPGPVVDFLIANQNVRDP+ +DW KAKRTLKNLRIKASPSN EYKITGLSE C
Sbjct: 278 TTMIIQPGPVVDFLIANQNVRDPFSLDWTKAKRTLKNLRIKASPSNAEYKITGLSEKPCK 337
Query: 669 QQLFSLKQKNGNANGDVQTVEVTVSDYFVNYRNIQLRYSGDLPCINVG 812
+Q F+LKQK GN D +E+TV DYFV +RNI+LRYS DLPCINVG
Sbjct: 338 EQTFTLKQKGGN---DEDCIEITVYDYFVKHRNIELRYSSDLPCINVG 382
Score = 68.6 bits (166), Expect(2) = 1e-85
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +1
Query: 1 DTELGGKAFAYDGEKTLFTVGPLPQNKHDFTVVLEDLSSNR 123
++EL GK FAYDGEK+LFTVGPLP+NK +FTVVLED++SNR
Sbjct: 114 NSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDITSNR 154