BLASTX nr result
ID: Coptis25_contig00006100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006100 (382 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA03413.1| EDGP precursor [Daucus carota] 100 1e-19 pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|p... 99 4e-19 pdb|3VLA|A Chain A, Crystal Structure Of Edgp 97 1e-18 ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|2... 97 2e-18 emb|CAN61502.1| hypothetical protein VITISV_011733 [Vitis vinifera] 96 3e-18 >dbj|BAA03413.1| EDGP precursor [Daucus carota] Length = 433 Score = 100 bits (249), Expect = 1e-19 Identities = 47/57 (82%), Positives = 53/57 (92%) Frame = -2 Query: 174 AQPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4 AQPSFRP ALV+PV KDASTLQYVT I+QRTPLVS N+VVDLGG++LWVDCD+NYVS Sbjct: 20 AQPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVS 76 >pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp Length = 413 Score = 99.0 bits (245), Expect = 4e-19 Identities = 46/56 (82%), Positives = 52/56 (92%) Frame = -2 Query: 171 QPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4 QPSFRP ALV+PV KDASTLQYVT I+QRTPLVS N+VVDLGG++LWVDCD+NYVS Sbjct: 1 QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVS 56 >pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Score = 97.1 bits (240), Expect = 1e-18 Identities = 45/55 (81%), Positives = 51/55 (92%) Frame = -2 Query: 168 PSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4 PSFRP ALV+PV KDASTLQYVT I+QRTPLVS N+VVDLGG++LWVDCD+NYVS Sbjct: 2 PSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVS 56 >ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|222843848|gb|EEE81395.1| predicted protein [Populus trichocarpa] Length = 438 Score = 96.7 bits (239), Expect = 2e-18 Identities = 44/57 (77%), Positives = 53/57 (92%) Frame = -2 Query: 174 AQPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4 AQ SFRP+ALV+PV+KD++TLQYVT+I QRTP V IN+VVDLGGQ+LWVDCD+NYVS Sbjct: 23 AQQSFRPKALVVPVTKDSATLQYVTQIKQRTPQVPINLVVDLGGQFLWVDCDKNYVS 79 >emb|CAN61502.1| hypothetical protein VITISV_011733 [Vitis vinifera] Length = 415 Score = 95.9 bits (237), Expect = 3e-18 Identities = 44/57 (77%), Positives = 52/57 (91%) Frame = -2 Query: 174 AQPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4 AQ SFRP ALV+PVSKD+STLQYVT I+QRTPLV + +VVDLGGQ+LWVDC++NYVS Sbjct: 22 AQSSFRPHALVIPVSKDSSTLQYVTSINQRTPLVPLQLVVDLGGQFLWVDCEQNYVS 78