BLASTX nr result

ID: Coptis25_contig00006100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006100
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03413.1| EDGP precursor [Daucus carota]                        100   1e-19
pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|p...    99   4e-19
pdb|3VLA|A Chain A, Crystal Structure Of Edgp                          97   1e-18
ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
emb|CAN61502.1| hypothetical protein VITISV_011733 [Vitis vinifera]    96   3e-18

>dbj|BAA03413.1| EDGP precursor [Daucus carota]
          Length = 433

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/57 (82%), Positives = 53/57 (92%)
 Frame = -2

Query: 174 AQPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4
           AQPSFRP ALV+PV KDASTLQYVT I+QRTPLVS N+VVDLGG++LWVDCD+NYVS
Sbjct: 20  AQPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVS 76


>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C
           Chain C, Crystal Structure Of Xeg-Edgp
          Length = 413

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = -2

Query: 171 QPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4
           QPSFRP ALV+PV KDASTLQYVT I+QRTPLVS N+VVDLGG++LWVDCD+NYVS
Sbjct: 1   QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVS 56


>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
          Length = 413

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/55 (81%), Positives = 51/55 (92%)
 Frame = -2

Query: 168 PSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4
           PSFRP ALV+PV KDASTLQYVT I+QRTPLVS N+VVDLGG++LWVDCD+NYVS
Sbjct: 2   PSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVS 56


>ref|XP_002302122.1| predicted protein [Populus trichocarpa] gi|222843848|gb|EEE81395.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/57 (77%), Positives = 53/57 (92%)
 Frame = -2

Query: 174 AQPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4
           AQ SFRP+ALV+PV+KD++TLQYVT+I QRTP V IN+VVDLGGQ+LWVDCD+NYVS
Sbjct: 23  AQQSFRPKALVVPVTKDSATLQYVTQIKQRTPQVPINLVVDLGGQFLWVDCDKNYVS 79


>emb|CAN61502.1| hypothetical protein VITISV_011733 [Vitis vinifera]
          Length = 415

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/57 (77%), Positives = 52/57 (91%)
 Frame = -2

Query: 174 AQPSFRPQALVLPVSKDASTLQYVTRISQRTPLVSINVVVDLGGQYLWVDCDRNYVS 4
           AQ SFRP ALV+PVSKD+STLQYVT I+QRTPLV + +VVDLGGQ+LWVDC++NYVS
Sbjct: 22  AQSSFRPHALVIPVSKDSSTLQYVTSINQRTPLVPLQLVVDLGGQFLWVDCEQNYVS 78


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