BLASTX nr result

ID: Coptis25_contig00006097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006097
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera]    57   1e-06

>emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera]
          Length = 1609

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 17/116 (14%)
 Frame = -3

Query: 298  IAEVVYLRAMEGELVSLAALLMVVPEKVTASVMGLRPEG------------CAIREAFCF 155
            IAEV Y+ AMEG +++LAALL+V  +KV AS++ L+ +G            C ++EA   
Sbjct: 739  IAEVAYVTAMEGRVIALAALLVVAADKVNASILVLQSDGDLSSKEKTSIYECVVKEALSL 798

Query: 154  GQKEGS-FKA*KRRLALSSRCQKLLIQIELLK----ASFLQRADRRVISPLIRSSQ 2
            G+ E S     K +     +   LL ++ELL+     +     +R+V SPLIR++Q
Sbjct: 799  GRTETSKSTTCKWKSEEVEKRALLLCEMELLQLFGAVAHNSCTERKVTSPLIRAAQ 854


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