BLASTX nr result

ID: Coptis25_contig00006071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006071
         (1670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327742.1| 3-dehydroquinate synthase [Populus trichocar...   640   0.0  
gb|ABK94662.1| unknown [Populus trichocarpa]                          640   0.0  
ref|XP_003537645.1| PREDICTED: 3-dehydroquinate synthase-like [G...   638   e-180
gb|ACM45081.1| 3-dehydroquinate synthase [Vitis vinifera]             637   e-180
ref|XP_002263236.1| PREDICTED: 3-dehydroquinate synthase [Vitis ...   637   e-180

>ref|XP_002327742.1| 3-dehydroquinate synthase [Populus trichocarpa]
            gi|222836827|gb|EEE75220.1| 3-dehydroquinate synthase
            [Populus trichocarpa]
          Length = 443

 Score =  640 bits (1652), Expect = 0.0
 Identities = 332/441 (75%), Positives = 363/441 (82%), Gaps = 4/441 (0%)
 Frame = +1

Query: 172  MATSTTHPPLQFSIKPSTVSRSETFDPRFLNKKLTLT----SAKFKSNHLKTSCALKRSN 339
            ++  TTH P   S KP ++     F  RF N+   LT    S    +N ++T   ++ S 
Sbjct: 10   LSLPTTHNPSSLS-KPKSLP---DFYLRFRNQNPKLTRVGISVTNPNNRIRTLSTIRAST 65

Query: 340  ISSTSTPLMEKKYSPEPTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKRVLVVTNTT 519
             S       EK     PTIV+VDLGNRSYPIYIGSGLL+QP+LLQRHVHGKRVLVVTN+T
Sbjct: 66   ASVMEASSKEKAL---PTIVEVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNST 122

Query: 520  VAPLYLDKVISALTYENSNVSVESVILPDGEKYKDMDTLMKVFDKAIESRFDRRSTFVAL 699
            VAPLYLDKV+ ALT  N NVSV+SVILPDGEKYK+M+TLMKVFDKAIESR DRR TFVAL
Sbjct: 123  VAPLYLDKVVDALTRGNPNVSVDSVILPDGEKYKNMETLMKVFDKAIESRLDRRCTFVAL 182

Query: 700  GGGVIGDMCGFAAAAYLRGVNFIQIPTTVMAQVDSSVGGKTGINHTLGKNLIGAFYQPQC 879
            GGGVIGDMCGFAAA++LRGVNFIQIPTTVMAQVDSSVGGKTGINH LGKNLIGAFYQPQC
Sbjct: 183  GGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQC 242

Query: 880  VLIDTDTLNTLPDRELASGLGEVVKYGLIRDAEFFEWQEKNMEALLARDPNAMAYAIKRS 1059
            VLIDTDTLNTLPDRELASGL EV+KYGLIRDA FFEWQEKNM AL+ARDP+AMAYAIKRS
Sbjct: 243  VLIDTDTLNTLPDRELASGLAEVIKYGLIRDAVFFEWQEKNMAALMARDPSAMAYAIKRS 302

Query: 1060 CENKAEVVSLDEKEGGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVMAVDMSYRL 1239
            CENKAEVVSLDEKE GLRATLNLGHTFGHAIETGFGYG WLHGEAVAAG VMAVDMSYRL
Sbjct: 303  CENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGVWLHGEAVAAGMVMAVDMSYRL 362

Query: 1240 GWIDESIVKRTYNILEQAKLPTTPPEIMTVDMFKSYMAIDKKVADXXXXXXXXXXXXXNC 1419
            GWID+ +VKR  NIL+QAKLPT PP+ +TV+MFKS MA+DKKVAD             NC
Sbjct: 363  GWIDDMLVKRVLNILQQAKLPTAPPDTITVEMFKSVMAVDKKVADGLLRLILLKGSLGNC 422

Query: 1420 VFTGDYDRKALDETLRAFCKS 1482
            VFTGDYDRKALD+TLRAFCKS
Sbjct: 423  VFTGDYDRKALDDTLRAFCKS 443


>gb|ABK94662.1| unknown [Populus trichocarpa]
          Length = 443

 Score =  640 bits (1651), Expect = 0.0
 Identities = 332/441 (75%), Positives = 363/441 (82%), Gaps = 4/441 (0%)
 Frame = +1

Query: 172  MATSTTHPPLQFSIKPSTVSRSETFDPRFLNKKLTLT----SAKFKSNHLKTSCALKRSN 339
            ++  TTH P   S KP ++     F  RF N+   LT    S    +N ++T   ++ S 
Sbjct: 10   LSLPTTHNPSSLS-KPKSLP---DFYLRFRNQNPKLTRVGISVTNPNNRIRTLSTIRAST 65

Query: 340  ISSTSTPLMEKKYSPEPTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKRVLVVTNTT 519
             S       EK     PTIV+VDLGNRSYPIYIGSGLL+QP+LLQRHVHGKRVLVVTN+T
Sbjct: 66   ASVMEASSKEKAL---PTIVEVDLGNRSYPIYIGSGLLDQPELLQRHVHGKRVLVVTNST 122

Query: 520  VAPLYLDKVISALTYENSNVSVESVILPDGEKYKDMDTLMKVFDKAIESRFDRRSTFVAL 699
            VAPLYLDKV+ ALT  N NVSV+SVILPDGEKYK+M+TLMKVFDKAIESR DRR TFVAL
Sbjct: 123  VAPLYLDKVVDALTRGNPNVSVDSVILPDGEKYKNMETLMKVFDKAIESRLDRRCTFVAL 182

Query: 700  GGGVIGDMCGFAAAAYLRGVNFIQIPTTVMAQVDSSVGGKTGINHTLGKNLIGAFYQPQC 879
            GGGVIGDMCGFAAA++LRGVNFIQIPTTVMAQVDSSVGGKTGINH LGKNLIGAFYQPQC
Sbjct: 183  GGGVIGDMCGFAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQC 242

Query: 880  VLIDTDTLNTLPDRELASGLGEVVKYGLIRDAEFFEWQEKNMEALLARDPNAMAYAIKRS 1059
            VLIDTDTLNTLPDRELASGL EV+KYGLIRDA FFEWQEKNM AL+ARDP+AMAYAIKRS
Sbjct: 243  VLIDTDTLNTLPDRELASGLAEVIKYGLIRDAVFFEWQEKNMAALMARDPSAMAYAIKRS 302

Query: 1060 CENKAEVVSLDEKEGGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVMAVDMSYRL 1239
            CENKAEVVSLDEKE GLRATLNLGHTFGHAIETGFGYG WLHGEAVAAG VMAVDMSYRL
Sbjct: 303  CENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGVWLHGEAVAAGMVMAVDMSYRL 362

Query: 1240 GWIDESIVKRTYNILEQAKLPTTPPEIMTVDMFKSYMAIDKKVADXXXXXXXXXXXXXNC 1419
            GWID+ +VKR  NIL+QAKLPT PP+ +TV+MFKS MA+DKKVAD             NC
Sbjct: 363  GWIDDLLVKRVLNILQQAKLPTAPPDTITVEMFKSVMAVDKKVADGLLRLILLKGSLGNC 422

Query: 1420 VFTGDYDRKALDETLRAFCKS 1482
            VFTGDYDRKALD+TLRAFCKS
Sbjct: 423  VFTGDYDRKALDDTLRAFCKS 443


>ref|XP_003537645.1| PREDICTED: 3-dehydroquinate synthase-like [Glycine max]
          Length = 437

 Score =  638 bits (1645), Expect = e-180
 Identities = 321/389 (82%), Positives = 342/389 (87%), Gaps = 4/389 (1%)
 Frame = +1

Query: 328  KRSNISSTSTPLME----KKYSPEPTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKR 495
            ++S I +TS+ +M+    K     PTIV+VDLG+RSYPIYIGSGLLNQPD LQRHVHGKR
Sbjct: 49   RKSRICATSSQVMDPSAAKSEPALPTIVEVDLGSRSYPIYIGSGLLNQPDYLQRHVHGKR 108

Query: 496  VLVVTNTTVAPLYLDKVISALTYENSNVSVESVILPDGEKYKDMDTLMKVFDKAIESRFD 675
            VLVVTN TVAPLYLDKV+ ALT  N NVSVESVILPDGE+YKDMDTLMKVFDKAIESR D
Sbjct: 109  VLVVTNETVAPLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLD 168

Query: 676  RRSTFVALGGGVIGDMCGFAAAAYLRGVNFIQIPTTVMAQVDSSVGGKTGINHTLGKNLI 855
            RR TFVALGGGVIGDMCGFAA+A+LRGVNFIQIPTTVMAQVDSSVGGKTGINH LGKN+I
Sbjct: 169  RRCTFVALGGGVIGDMCGFAASAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNMI 228

Query: 856  GAFYQPQCVLIDTDTLNTLPDRELASGLGEVVKYGLIRDAEFFEWQEKNMEALLARDPNA 1035
            G FYQPQCVLIDTDTLNTLPDRELASGL EV+KYGLIRDAEFFEWQEKNM  LLARDP+ 
Sbjct: 229  GTFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMHLLLARDPSV 288

Query: 1036 MAYAIKRSCENKAEVVSLDEKEGGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVM 1215
            MAYAIKRSCENKAEVVSLDEKE GLRATLNLGHTFGHAIETG GYGQWLHGEAVAAGTVM
Sbjct: 289  MAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGTVM 348

Query: 1216 AVDMSYRLGWIDESIVKRTYNILEQAKLPTTPPEIMTVDMFKSYMAIDKKVADXXXXXXX 1395
            AVDMSYRLGWID+S+VKR  +IL+QAKLPT PPE +TVDMFKS MA+DKKVAD       
Sbjct: 349  AVDMSYRLGWIDDSLVKRVGDILKQAKLPTAPPETVTVDMFKSVMAVDKKVADGLLRLIL 408

Query: 1396 XXXXXXNCVFTGDYDRKALDETLRAFCKS 1482
                  NCVFTGDYDRKALD TLRAFCKS
Sbjct: 409  LKGPLGNCVFTGDYDRKALDNTLRAFCKS 437


>gb|ACM45081.1| 3-dehydroquinate synthase [Vitis vinifera]
          Length = 456

 Score =  637 bits (1644), Expect = e-180
 Identities = 318/387 (82%), Positives = 344/387 (88%), Gaps = 4/387 (1%)
 Frame = +1

Query: 334  SNISSTSTPLMEKKYSPE----PTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKRVL 501
            S IS++STP+M++  S      PT+V+VDLGNRSYPIYIGSGLL QP+LLQRHVHGKR L
Sbjct: 70   SRISASSTPVMDQSPSQTSPRVPTVVEVDLGNRSYPIYIGSGLLQQPELLQRHVHGKRAL 129

Query: 502  VVTNTTVAPLYLDKVISALTYENSNVSVESVILPDGEKYKDMDTLMKVFDKAIESRFDRR 681
            VVTNTT+A LYLDKV+ ALT  N N+SVESVILPDGEKYK+MDTLMKVFDKAIESR DRR
Sbjct: 130  VVTNTTIAALYLDKVVDALTRGNPNISVESVILPDGEKYKNMDTLMKVFDKAIESRLDRR 189

Query: 682  STFVALGGGVIGDMCGFAAAAYLRGVNFIQIPTTVMAQVDSSVGGKTGINHTLGKNLIGA 861
             TFVA+GGGVIGDMCGFAAAA+LRGVNFIQIPTTVMAQVDSSVGGKTGINH LGKNLIGA
Sbjct: 190  CTFVAVGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGA 249

Query: 862  FYQPQCVLIDTDTLNTLPDRELASGLGEVVKYGLIRDAEFFEWQEKNMEALLARDPNAMA 1041
            FYQPQCVLIDTDTLNTLP+RELASG  EV+KYGLIRDAEFFEWQEKNM+AL+ARDP A+A
Sbjct: 250  FYQPQCVLIDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMQALMARDPGALA 309

Query: 1042 YAIKRSCENKAEVVSLDEKEGGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVMAV 1221
            YAIKRSCENKAEVVSLDEKE GLRATLNLGHTFGHAIETG GYGQWLHGEAVAAG VMAV
Sbjct: 310  YAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGMVMAV 369

Query: 1222 DMSYRLGWIDESIVKRTYNILEQAKLPTTPPEIMTVDMFKSYMAIDKKVADXXXXXXXXX 1401
            DMSYRLGWID+SIVKR +NI++QAKLP TPPE MTV+MFKS MA+DKKVAD         
Sbjct: 370  DMSYRLGWIDDSIVKRVHNIIKQAKLPITPPESMTVEMFKSVMAVDKKVADGLLRLILLK 429

Query: 1402 XXXXNCVFTGDYDRKALDETLRAFCKS 1482
                NCVFTGDYDRKALD+TLRAF KS
Sbjct: 430  GPLGNCVFTGDYDRKALDDTLRAFAKS 456


>ref|XP_002263236.1| PREDICTED: 3-dehydroquinate synthase [Vitis vinifera]
            gi|297734973|emb|CBI17335.3| unnamed protein product
            [Vitis vinifera]
          Length = 456

 Score =  637 bits (1644), Expect = e-180
 Identities = 318/387 (82%), Positives = 344/387 (88%), Gaps = 4/387 (1%)
 Frame = +1

Query: 334  SNISSTSTPLMEKKYSPE----PTIVDVDLGNRSYPIYIGSGLLNQPDLLQRHVHGKRVL 501
            S IS++STP+M++  S      PT+V+VDLGNRSYPIYIGSGLL QP+LLQRHVHGKR L
Sbjct: 70   SRISASSTPVMDQSPSQTSPRVPTVVEVDLGNRSYPIYIGSGLLQQPELLQRHVHGKRAL 129

Query: 502  VVTNTTVAPLYLDKVISALTYENSNVSVESVILPDGEKYKDMDTLMKVFDKAIESRFDRR 681
            VVTNTT+A LYLDKV+ ALT  N N+SVESVILPDGEKYK+MDTLMKVFDKAIESR DRR
Sbjct: 130  VVTNTTIAALYLDKVVDALTRGNPNISVESVILPDGEKYKNMDTLMKVFDKAIESRLDRR 189

Query: 682  STFVALGGGVIGDMCGFAAAAYLRGVNFIQIPTTVMAQVDSSVGGKTGINHTLGKNLIGA 861
             TFVA+GGGVIGDMCGFAAAA+LRGVNFIQIPTTVMAQVDSSVGGKTGINH LGKNLIGA
Sbjct: 190  CTFVAVGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGA 249

Query: 862  FYQPQCVLIDTDTLNTLPDRELASGLGEVVKYGLIRDAEFFEWQEKNMEALLARDPNAMA 1041
            FYQPQCVLIDTDTLNTLP+RELASG  EV+KYGLIRDAEFFEWQEKNM+AL+ARDP A+A
Sbjct: 250  FYQPQCVLIDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMQALMARDPGALA 309

Query: 1042 YAIKRSCENKAEVVSLDEKEGGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGTVMAV 1221
            YAIKRSCENKAEVVSLDEKE GLRATLNLGHTFGHAIETG GYGQWLHGEAVAAG VMAV
Sbjct: 310  YAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGVGYGQWLHGEAVAAGMVMAV 369

Query: 1222 DMSYRLGWIDESIVKRTYNILEQAKLPTTPPEIMTVDMFKSYMAIDKKVADXXXXXXXXX 1401
            DMSYRLGWID+SIVKR +NI++QAKLP TPPE MTV+MFKS MA+DKKVAD         
Sbjct: 370  DMSYRLGWIDDSIVKRVHNIIKQAKLPITPPESMTVEMFKSVMAVDKKVADGLLRLILLK 429

Query: 1402 XXXXNCVFTGDYDRKALDETLRAFCKS 1482
                NCVFTGDYDRKALD+TLRAF KS
Sbjct: 430  GPLGNCVFTGDYDRKALDDTLRAFAKS 456


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