BLASTX nr result

ID: Coptis25_contig00006069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006069
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23166.3| unnamed protein product [Vitis vinifera]              104   4e-20
ref|XP_002518540.1| conserved hypothetical protein [Ricinus comm...   102   2e-19
ref|XP_002305617.1| predicted protein [Populus trichocarpa] gi|2...   100   8e-19
ref|XP_003556023.1| PREDICTED: uncharacterized protein LOC100791...    98   5e-18
ref|NP_001236388.1| uncharacterized protein LOC100527205 [Glycin...    97   7e-18

>emb|CBI23166.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  104 bits (260), Expect = 4e-20
 Identities = 74/188 (39%), Positives = 100/188 (53%), Gaps = 14/188 (7%)
 Frame = -2

Query: 1029 KNIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEISSNSRISVKLQRNLSRKGSQRAE 850
            + I V DQ       TE SDSF+VD+E       ++ ++NSRI+  LQR+LSRKGSQR  
Sbjct: 7    QKILVSDQVNGFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRIT--LQRSLSRKGSQRGG 64

Query: 849  RNKTTLAXXXXXXXXXXXSKTAGTLSTGGCNPDKSTPAPVMSSGS------KELSKQPQQ 688
              K               S     L+ GG   +K     V ++ +        +  Q   
Sbjct: 65   EKKPNSVASIDADAVLATSSPRAALA-GGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHH 123

Query: 687  AITITA-------ENRFNCRR-SFKQRTSASIIDPRRVLFYFATLSSVGTLLLIYFTLSI 532
             I ITA       E+RF  RR SF++ + + +IDPRR+LF+FATLSS+GT+LLIYFTLSI
Sbjct: 124  HIAITAGNISTITESRFISRRYSFRRASPSWLIDPRRILFFFATLSSMGTILLIYFTLSI 183

Query: 531  TKFSGDST 508
             +  GD T
Sbjct: 184  KRLGGDDT 191


>ref|XP_002518540.1| conserved hypothetical protein [Ricinus communis]
            gi|223542385|gb|EEF43927.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 214

 Score =  102 bits (255), Expect = 2e-19
 Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 11/187 (5%)
 Frame = -2

Query: 1041 DMGMKNIAVCDQEESSLDTTEMSDSFIVDIENLSQDTV-QEISSNSRISVKLQRNLSRKG 865
            +MG + I+V D       + E SD+F++D+E+ S  T  +E++ NSRI+  LQR+LSRKG
Sbjct: 25   NMGTQKISVLDHINGFEYSAEKSDNFVIDMESFSHATNNKEVNPNSRIT--LQRSLSRKG 82

Query: 864  SQRAERNKTTLAXXXXXXXXXXXSKTAGTLSTGGCNPDKSTPAPVMSSGSKELSKQPQQA 685
            S R                    +  A +   G   P+K +   V ++     S Q    
Sbjct: 83   SLRMSGRGGDKKINSNPSPNDRDAAVATSSPRGPGMPEKGSMVSVGTADHPSSSAQVHHQ 142

Query: 684  ITITAENRFNC----------RRSFKQRTSASIIDPRRVLFYFATLSSVGTLLLIYFTLS 535
            ITIT  N  N           R SFK+ + +  IDP+RVLF+FATLSS+GT+LLIYFTLS
Sbjct: 143  ITITTTNNLNASSTEGRCTIRRNSFKRPSLSWTIDPKRVLFFFATLSSMGTMLLIYFTLS 202

Query: 534  ITKFSGD 514
            I K   D
Sbjct: 203  IGKLGAD 209


>ref|XP_002305617.1| predicted protein [Populus trichocarpa] gi|222848581|gb|EEE86128.1|
            predicted protein [Populus trichocarpa]
          Length = 195

 Score =  100 bits (249), Expect = 8e-19
 Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 9/184 (4%)
 Frame = -2

Query: 1038 MGMKNIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEISSNSRISVKLQRNLSRKGSQ 859
            M  + + V D+ +    T E SDSFI+D+E+ S    ++I++N RI+  LQRNLSRKGS 
Sbjct: 16   MEAQKLTVLDRIDGFQYTKEKSDSFIIDMESFSHGINKDINTNQRIT--LQRNLSRKGSP 73

Query: 858  RAERNKTTLAXXXXXXXXXXXSKTAGTLSTGGCNPDKSTPAPVMSSGSKELSKQPQ--QA 685
            R                         + S  G  P     A V++ G+ + S  PQ    
Sbjct: 74   RGGGGGGEKKIHSNLSHLCDKEAIVASASPRG--PSTPEKAAVVTVGTPDHSSSPQVHHQ 131

Query: 684  ITITA-------ENRFNCRRSFKQRTSASIIDPRRVLFYFATLSSVGTLLLIYFTLSITK 526
            ITIT        E R   R SFK+ + + ++DP+RVLF+FATLSS+GT+LLIY TLSI K
Sbjct: 132  ITITTGSINGTPEGRCIRRNSFKRASPSWVLDPKRVLFFFATLSSMGTMLLIYLTLSIGK 191

Query: 525  FSGD 514
               D
Sbjct: 192  LKTD 195


>ref|XP_003556023.1| PREDICTED: uncharacterized protein LOC100791649 [Glycine max]
          Length = 219

 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 12/193 (6%)
 Frame = -2

Query: 1056 ETEFGDMGMKNIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEIS-SNSRISVKLQRN 880
            E+E  +MG + I V D       + E +DSF++D+++ S    ++ + +NSRI+  LQR+
Sbjct: 22   ESEQKNMGTQRILVSDHTNGYQYSAEEADSFVIDMDSFSSGINKDSTKANSRIT--LQRS 79

Query: 879  LSRKGSQRAERNKTTLAXXXXXXXXXXXSKTAGTLSTGGCNPDKSTPAPVMSSGSKELSK 700
            LSRKGSQR    K               + +      G C  +KS    V S+     + 
Sbjct: 80   LSRKGSQRGGDRKVNGNVTLHDRDTAPTTCSPKAALAGSCTAEKSAVVAVGST-HHSTNT 138

Query: 699  QPQQAITITAEN-----------RFNCRRSFKQRTSASIIDPRRVLFYFATLSSVGTLLL 553
            Q    ITITA N           +F  RR+  +R S+ ++DP+RVL  FATLSS+GT+LL
Sbjct: 139  QVHHQITITASNMCTTTPTPNESKFITRRNSFKRPSSWLLDPKRVLLLFATLSSMGTMLL 198

Query: 552  IYFTLSITKFSGD 514
            IYFTL+I+K   D
Sbjct: 199  IYFTLTISKQKAD 211


>ref|NP_001236388.1| uncharacterized protein LOC100527205 [Glycine max]
            gi|255631780|gb|ACU16257.1| unknown [Glycine max]
          Length = 214

 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 11/188 (5%)
 Frame = -2

Query: 1056 ETEFGDMGMKNIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEISSNSRISVKLQRNL 877
            E+E  +MG + I V D   +   + E +DSF++D+++ S   + + S+N+   + LQR+L
Sbjct: 22   ESEEKNMGTQRILVSDHINAYQYSAEEADSFVIDMDSFSSG-INKDSNNANSRITLQRSL 80

Query: 876  SRKGSQRAERNKTTLAXXXXXXXXXXXSKTAGTLSTGGCNPDKSTPAPVMSSGSKELSKQ 697
            SRKGSQR    K               + +      G C  +KS    V S+     + Q
Sbjct: 81   SRKGSQRGGDRKVNGNVTLHDRDTAPTTCSPKAALAGSCTAEKSAVVAVGST-HHSTNTQ 139

Query: 696  PQQAITITA-----------ENRFNCRRSFKQRTSASIIDPRRVLFYFATLSSVGTLLLI 550
             +  ITITA           E++   RR+  +R+S+ ++DP+RVL +FATLSS+GT+LLI
Sbjct: 140  VRHQITITASSMCTTTTPTTESKCITRRNSFKRSSSWLLDPKRVLLFFATLSSMGTMLLI 199

Query: 549  YFTLSITK 526
            YFTL+++K
Sbjct: 200  YFTLTLSK 207


Top