BLASTX nr result

ID: Coptis25_contig00006062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006062
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI69355.1| mannose-binding lectin [Pandanus amaryllifolius]       197   1e-48
gb|AAQ75079.1| mannose-binding lectin ZAA precursor [Zantedeschi...   195   9e-48
gb|AAT73201.1| mannose-binding lectin [Taxus x media]                 126   5e-27
gb|AAP57409.1| agglutinin [Hippeastrum vittatum]                      111   2e-22
gb|AAM28277.1| mannose-binding lectin [Ananas comosus]                108   9e-22

>gb|AEI69355.1| mannose-binding lectin [Pandanus amaryllifolius]
          Length = 140

 Score =  197 bits (502), Expect = 1e-48
 Identities = 94/133 (70%), Positives = 111/133 (83%)
 Frame = +2

Query: 101 RKFNMLAALLIVFLSISGAVSEDILFSGETLNAGEFIESGPYRFIMQADCNLVLYANRTR 280
           +KF  +   L V ++ S  V+ED +FSGE+L   +++ESGPYRFIMQ DCNLVLY N+TR
Sbjct: 7   KKFTAMVLALSVLVANS-VVAEDTMFSGESLQTNQYLESGPYRFIMQGDCNLVLYVNKTR 65

Query: 281 ALWSSRTNRRATICRATLQNNGNLVILSGTDVIWTSNSARGPNNYRLIAQGDGNVVIYGA 460
           ALWSSRTN + T C ATLQNNGNLV+LSG++V+WTSNSARGPNNYRLI Q DGNVVIYGA
Sbjct: 66  ALWSSRTNGQGTACNATLQNNGNLVVLSGSNVVWTSNSARGPNNYRLIVQSDGNVVIYGA 125

Query: 461 ALWATNTVQSRRR 499
           ALWATNTVQSR+R
Sbjct: 126 ALWATNTVQSRKR 138


>gb|AAQ75079.1| mannose-binding lectin ZAA precursor [Zantedeschia aethiopica]
           gi|50841433|gb|AAT84079.1| mannose-binding lectin
           precursor [Zantedeschia aethiopica]
          Length = 138

 Score =  195 bits (495), Expect = 9e-48
 Identities = 92/136 (67%), Positives = 116/136 (85%), Gaps = 1/136 (0%)
 Frame = +2

Query: 95  IARKFNMLAAL-LIVFLSISGAVSEDILFSGETLNAGEFIESGPYRFIMQADCNLVLYAN 271
           +AR  + LA L L+V L  +GAV+EDI+F+GE+L+  EF+E+GPYRFIMQ DCNLVLY N
Sbjct: 1   MARSLHALATLALLVLLLSTGAVAEDIMFNGESLSTNEFLENGPYRFIMQDDCNLVLYIN 60

Query: 272 RTRALWSSRTNRRATICRATLQNNGNLVILSGTDVIWTSNSARGPNNYRLIAQGDGNVVI 451
           RTRALW+S TN R + CRATLQNNGNLV+++G+D++W+SNS+RG N+YRLI Q DGNVVI
Sbjct: 61  RTRALWASGTNGRGSNCRATLQNNGNLVVITGSDIVWSSNSSRGQNSYRLIVQSDGNVVI 120

Query: 452 YGAALWATNTVQSRRR 499
           YG ALWATNTVQ+R+R
Sbjct: 121 YGGALWATNTVQNRKR 136


>gb|AAT73201.1| mannose-binding lectin [Taxus x media]
          Length = 144

 Score =  126 bits (316), Expect = 5e-27
 Identities = 62/132 (46%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
 Frame = +2

Query: 116 LAALLIVFLSISGAVSEDILFSGETLNAGEFIESGPYRFIMQADCNLVLYANRTRALWSS 295
           + AL+I+    +   S+ +L SGE+L AGE ++   Y  +MQ DCNLVLYAN+ + LW+S
Sbjct: 11  IVALVILLTFANPCSSKSVLKSGESLAAGESLQYAQYILVMQGDCNLVLYANKVKVLWAS 70

Query: 296 RTNRR--ATICRATLQNNGNLVILSGTDVIWTSNSARGPNNYRLIAQGDGNVVIYG--AA 463
           RTN +  A  C+ ++QN+GNLVI + T  +W S ++R   +Y+L  QGDGNVVIYG   A
Sbjct: 71  RTNGKGGAASCKLSMQNDGNLVIYAATTPVWASRTSRAFASYKLNLQGDGNVVIYGPSGA 130

Query: 464 LWATNTVQSRRR 499
           +WATNT Q++++
Sbjct: 131 IWATNTAQNKKK 142


>gb|AAP57409.1| agglutinin [Hippeastrum vittatum]
          Length = 158

 Score =  111 bits (277), Expect = 2e-22
 Identities = 59/127 (46%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
 Frame = +2

Query: 107 FNMLAALLIVFLSISGAVSEDILFSGETLNAGEFIESGPYRFIMQADCNLVLYANRTRAL 286
           F ++ A +++ +     +S++IL+SGETL+AGE +  GPY FIMQ DCNLVLY +  + +
Sbjct: 6   FLIVVAAIVLGVITPSCLSDNILYSGETLSAGESLNYGPYTFIMQQDCNLVLY-DVDKPI 64

Query: 287 WSSRTNRRATICRATLQNNGNLVIL--SGTDVIWTSNSARGPNNYRLIAQGDGNVVIYGA 460
           W+S T   A  C  ++Q++GNLV+   SG   IW SN+     NY  I Q D NVVIYG 
Sbjct: 65  WASNTGGLARGCHLSMQSDGNLVVYSPSGNRPIWASNTQGENGNYVCIVQKDRNVVIYGT 124

Query: 461 ALWATNT 481
           A WAT T
Sbjct: 125 ARWATGT 131


>gb|AAM28277.1| mannose-binding lectin [Ananas comosus]
          Length = 164

 Score =  108 bits (271), Expect = 9e-22
 Identities = 58/124 (46%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
 Frame = +2

Query: 128 LIVFLSISGAV-----SEDILFSGETLNAGEFIESGPYRFIMQADCNLVLYANRTRALWS 292
           L+V L +S AV     +E+IL++ + L  G+ + +G +RF MQ DCNLVLY   + A+WS
Sbjct: 7   LVVGLLVSSAVFGFCSAENILYTNDVLFGGQSLTNGNFRFTMQTDCNLVLYDGGS-AIWS 65

Query: 293 SRTNRRATICRATLQNNGNLVILSGTD-VIWTSNSARGPNNYRLIAQGDGNVVIYGAALW 469
           S T R+ T C   +Q++GNLV+ +G++  +W SN+ RG  NY  I Q D NVV+YG ALW
Sbjct: 66  SGTYRKGTGCYVKMQSDGNLVVYNGSNNALWASNTDRGRGNYVCILQRDRNVVVYGPALW 125

Query: 470 ATNT 481
           AT T
Sbjct: 126 ATGT 129


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