BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006060
         (1809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   709   0.0  
ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus c...   688   0.0  
ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   679   0.0  
ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   677   0.0  
ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|2...   676   0.0  

>ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
            gi|297740899|emb|CBI31081.3| unnamed protein product
            [Vitis vinifera]
          Length = 418

 Score =  709 bits (1831), Expect = 0.0
 Identities = 352/418 (84%), Positives = 381/418 (91%), Gaps = 2/418 (0%)
 Frame = +3

Query: 300  MLGFNRSRTQPRSNRSWPFQGMDISDSKRKSNVVTKILFIATLATLSFILFKQFFSFSTP 479
            ML F RSR QPR +RS PF GM+ +D KRKSNVV KIL  ATL  L  ++ KQ  +F+TP
Sbjct: 1    MLNFTRSRNQPRPSRSMPFGGMEYADPKRKSNVVGKILLAATLTALCILMLKQSSNFNTP 60

Query: 480  SVFSHRDPEVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 659
            S FS  +P VTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGNLGA+KVLQ  FPE
Sbjct: 61   SPFSRHEPGVTHVLVTGGAGYIGSHAALRLLKDSHRVTIVDNLSRGNLGAIKVLQEQFPE 120

Query: 660  AGRLQFIYADLGDAKSVNKIFAENAFDAVIHFAAVAYVGESTLQPLRYYHNITANTLTVL 839
             GRLQFIYADLGDAK+VNKIF+ENAFDAV+HFAAVAYVGESTL+PLRYYHNIT+NTL VL
Sbjct: 121  PGRLQFIYADLGDAKAVNKIFSENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLVVL 180

Query: 840  EAMAAHGVSTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMSEDIILDFTRNSDM 1019
            EAMAAHGV+TLIYSSTCATYGEPEKMPITE TPQVPINPYGKAKKM+EDIILDF++NS+M
Sbjct: 181  EAMAAHGVNTLIYSSTCATYGEPEKMPITEQTPQVPINPYGKAKKMAEDIILDFSKNSEM 240

Query: 1020 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIISGLKVKGTDYNTPDG 1199
            AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASG+I GLKVKGTDY TPDG
Sbjct: 241  AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGVIPGLKVKGTDYKTPDG 300

Query: 1200 TCVRDYIDVTDLVDAHVKALAKAMPRKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVDF 1379
            TCVRDYIDVTDLVDAHVKAL KA P KVGIYNVGTGKGRSVKEFVEACKKATGVNIKV++
Sbjct: 301  TCVRDYIDVTDLVDAHVKALNKAAPGKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVEY 360

Query: 1380 LSRRPGDYAEVYSDPSKIRHELNWTAEHTDLQESLRVAWRWQKSHRNGYNS--LAAAS 1547
            L+RRPGDYAEV+SDPSKI HELNWTA++TDLQESLRVAWRWQK+HRNGY +  LA AS
Sbjct: 361  LARRPGDYAEVFSDPSKIDHELNWTAKYTDLQESLRVAWRWQKAHRNGYGTTPLAMAS 418


>ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis]
            gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase,
            putative [Ricinus communis]
          Length = 417

 Score =  688 bits (1775), Expect = 0.0
 Identities = 340/411 (82%), Positives = 368/411 (89%)
 Frame = +3

Query: 300  MLGFNRSRTQPRSNRSWPFQGMDISDSKRKSNVVTKILFIATLATLSFILFKQFFSFSTP 479
            ML F R+R Q R+NRS P  G+D +D KRKSNVV KI+  A L  L  I+ KQ  +F+TP
Sbjct: 1    MLNFGRARNQQRTNRSMPLAGLDYADPKRKSNVVGKIILAAALTALCIIMLKQSPTFNTP 60

Query: 480  SVFSHRDPEVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 659
            S FS  +  V HVLVTGGAGYIGSHA+LRLLKD YRVTIVDNLSRGNLGAVKVLQ LFPE
Sbjct: 61   SPFSLHEDGVVHVLVTGGAGYIGSHASLRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 660  AGRLQFIYADLGDAKSVNKIFAENAFDAVIHFAAVAYVGESTLQPLRYYHNITANTLTVL 839
             GRLQFIYADLG++KSVNKIF+ENAFDAV+HFAAVAYVGEST+ PL+YYHNIT+NTL VL
Sbjct: 121  PGRLQFIYADLGNSKSVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVL 180

Query: 840  EAMAAHGVSTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMSEDIILDFTRNSDM 1019
            E+MAAH V TLIYSSTCATYGEPEKMPITEDT QVPINPYGKAKKM+EDIILDF++NSDM
Sbjct: 181  ESMAAHDVKTLIYSSTCATYGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 1020 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIISGLKVKGTDYNTPDG 1199
            AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GIISGLKVKGTDY T DG
Sbjct: 241  AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDG 300

Query: 1200 TCVRDYIDVTDLVDAHVKALAKAMPRKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVDF 1379
            TC+RDYIDVTDLVDAHVKAL KAMP KVGIYNVGTGKGRSV EFVEACKKATGV+IKVD+
Sbjct: 301  TCIRDYIDVTDLVDAHVKALEKAMPGKVGIYNVGTGKGRSVNEFVEACKKATGVDIKVDY 360

Query: 1380 LSRRPGDYAEVYSDPSKIRHELNWTAEHTDLQESLRVAWRWQKSHRNGYNS 1532
            L RRPGDYAEVYSDP+KIR ELNWTA+HTDLQESL+VAWRWQK+HRNGY S
Sbjct: 361  LPRRPGDYAEVYSDPTKIRVELNWTAQHTDLQESLQVAWRWQKAHRNGYGS 411


>ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]
          Length = 417

 Score =  679 bits (1751), Expect = 0.0
 Identities = 340/417 (81%), Positives = 369/417 (88%), Gaps = 1/417 (0%)
 Frame = +3

Query: 300  MLGFNRSRTQPRSNRSWPFQGMDISDSKRKSNVVTKILFIATLATLSFILFKQFFSFSTP 479
            ML F RSR Q R  RS  F GMD  D KRK+N V KI+  A+L  +  ++ KQ  +FSTP
Sbjct: 1    MLSFGRSRNQSRFGRSVSFGGMDYPDPKRKNNFVGKIILAASLTAICIVMLKQSPNFSTP 60

Query: 480  SVFSHRDPEVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 659
            + F+     VTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQ LFPE
Sbjct: 61   TPFASHQLGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 660  AGRLQFIYADLGDAKSVNKIFAENAFDAVIHFAAVAYVGESTLQPLRYYHNITANTLTVL 839
             GRLQFIYADLGDAKSVNKIF+ENAFDAV+HFAAVAYVGESTL PL+YYHNIT+NTLTVL
Sbjct: 121  YGRLQFIYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVL 180

Query: 840  EAMAAHGVSTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMSEDIILDFTRNSDM 1019
            E+MAAHGV TLIYSSTCATYGEPEKMPITE+T Q PINPYGKAKKM+E+IILDF++NS M
Sbjct: 181  ESMAAHGVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKM 240

Query: 1020 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIISGLKVKGTDYNTPDG 1199
            AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GIISGLKVKGTDY T DG
Sbjct: 241  AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDG 300

Query: 1200 TCVRDYIDVTDLVDAHVKALAKAMPRKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVDF 1379
            TC+RDYIDVTDLVDAHVKAL KA+P KVGIYNVGTGKGRSVKEFVEACKKATGV+IKVD+
Sbjct: 301  TCIRDYIDVTDLVDAHVKALEKAIPGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDY 360

Query: 1380 LSRRPGDYAEVYSDPSKIRHELNWTAEHTDLQESLRVAWRWQKSHRNGY-NSLAAAS 1547
            L RRPGDYAEV+S+P+KI+ ELNWTA+HTDLQESL VAWRWQKSH NGY NSL  +S
Sbjct: 361  LPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSHLNGYGNSLVMSS 417


>ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
            gi|296087462|emb|CBI34051.3| unnamed protein product
            [Vitis vinifera]
          Length = 417

 Score =  677 bits (1748), Expect = 0.0
 Identities = 330/411 (80%), Positives = 370/411 (90%)
 Frame = +3

Query: 300  MLGFNRSRTQPRSNRSWPFQGMDISDSKRKSNVVTKILFIATLATLSFILFKQFFSFSTP 479
            ML ++R+R   + NRS+  + MD++DS+RKSNV  K+L   +L TL  I+ K+  +FS+P
Sbjct: 1    MLNYSRNRAHSKPNRSFSLEAMDLADSRRKSNVTGKVLMAISLITLCIIILKRSPNFSSP 60

Query: 480  SVFSHRDPEVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 659
            S FSHR P VTHVLVTGGAGYIGSHAALRLLKDS+RVTIVDNLSRGNLGAVKVLQ LFP+
Sbjct: 61   SPFSHRQPGVTHVLVTGGAGYIGSHAALRLLKDSHRVTIVDNLSRGNLGAVKVLQQLFPD 120

Query: 660  AGRLQFIYADLGDAKSVNKIFAENAFDAVIHFAAVAYVGESTLQPLRYYHNITANTLTVL 839
              +LQFIYADLGDAK+VNKIF+EN FDAV+HFAAVAYVGEST+ PLRYYHNIT+NTL VL
Sbjct: 121  PAQLQFIYADLGDAKAVNKIFSENEFDAVMHFAAVAYVGESTMDPLRYYHNITSNTLMVL 180

Query: 840  EAMAAHGVSTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMSEDIILDFTRNSDM 1019
            +AMAAHGV TLIYSSTCATYGEP+KMPITE TPQVPINPYGKAKKM+ED+I+DF++NSDM
Sbjct: 181  KAMAAHGVKTLIYSSTCATYGEPKKMPITEGTPQVPINPYGKAKKMAEDMIIDFSKNSDM 240

Query: 1020 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIISGLKVKGTDYNTPDG 1199
            AVM+LRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GII GLKVKGTDY T DG
Sbjct: 241  AVMVLRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYKTADG 300

Query: 1200 TCVRDYIDVTDLVDAHVKALAKAMPRKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVDF 1379
            TCVRDYIDVTDLVDAHVKALA A P+KVGIYNVGTGKGRSVKEFVEACKKATGV+IKV++
Sbjct: 301  TCVRDYIDVTDLVDAHVKALAHAKPKKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVEY 360

Query: 1380 LSRRPGDYAEVYSDPSKIRHELNWTAEHTDLQESLRVAWRWQKSHRNGYNS 1532
            L RRPGDYAEVYSDPSKI  ELNWTA++T+LQESL+ AWRWQKSHRNGY +
Sbjct: 361  LDRRPGDYAEVYSDPSKILRELNWTAQYTNLQESLQTAWRWQKSHRNGYGT 411


>ref|XP_002300551.1| predicted protein [Populus trichocarpa] gi|222847809|gb|EEE85356.1|
            predicted protein [Populus trichocarpa]
          Length = 417

 Score =  676 bits (1743), Expect = 0.0
 Identities = 332/411 (80%), Positives = 367/411 (89%)
 Frame = +3

Query: 300  MLGFNRSRTQPRSNRSWPFQGMDISDSKRKSNVVTKILFIATLATLSFILFKQFFSFSTP 479
            ML F R+RTQPRSNRS    GMD SD KRK+NVV KIL  A+L  +  I+ KQ  +F++P
Sbjct: 1    MLSFGRTRTQPRSNRSMSLGGMDFSDPKRKNNVVGKILLAASLTAVCIIMLKQSPTFNSP 60

Query: 480  SVFSHRDPEVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPE 659
            S FS R+  V HVLVTGGAGYIGSHAALRLLKD YRVTIVDNLSRGNLGAVKVLQ LFPE
Sbjct: 61   SPFSLREDGVIHVLVTGGAGYIGSHAALRLLKDGYRVTIVDNLSRGNLGAVKVLQELFPE 120

Query: 660  AGRLQFIYADLGDAKSVNKIFAENAFDAVIHFAAVAYVGESTLQPLRYYHNITANTLTVL 839
             GRLQFIYADLG+ K+VN IF++NAFDAV+HFAAVAYVGEST+ PL+YYHNIT+NTL VL
Sbjct: 121  PGRLQFIYADLGEPKTVNSIFSQNAFDAVMHFAAVAYVGESTVYPLKYYHNITSNTLVVL 180

Query: 840  EAMAAHGVSTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMSEDIILDFTRNSDM 1019
            E+MAA+ V TLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKM+EDIILDF++NSDM
Sbjct: 181  ESMAANDVKTLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDIILDFSKNSDM 240

Query: 1020 AVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIISGLKVKGTDYNTPDG 1199
            A+MILRYFNVIGSDP+GRLGEAPRPELREHGRISGACFDAA GI++GLKVKGTDY T DG
Sbjct: 241  AIMILRYFNVIGSDPDGRLGEAPRPELREHGRISGACFDAARGIVAGLKVKGTDYKTHDG 300

Query: 1200 TCVRDYIDVTDLVDAHVKALAKAMPRKVGIYNVGTGKGRSVKEFVEACKKATGVNIKVDF 1379
            TC+RDYIDVTDLVDAHVKAL KAMP KVGIYNVGTG GRSV EFV ACKKATGV+IKVD+
Sbjct: 301  TCIRDYIDVTDLVDAHVKALEKAMPGKVGIYNVGTGMGRSVNEFVHACKKATGVDIKVDY 360

Query: 1380 LSRRPGDYAEVYSDPSKIRHELNWTAEHTDLQESLRVAWRWQKSHRNGYNS 1532
            L RRPGDYAEV+SDPSKI  ELNWTA++TDLQ+SL+VAWRWQKSH+NGY S
Sbjct: 361  LPRRPGDYAEVFSDPSKINRELNWTAQYTDLQKSLQVAWRWQKSHQNGYGS 411