BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006055
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158107.1| PREDICTED: probable rRNA-processing protein ...   269   9e-70
ref|XP_004143659.1| PREDICTED: probable rRNA-processing protein ...   269   9e-70
ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Rici...   268   2e-69
ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68
ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein ...   262   1e-67

>ref|XP_004158107.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis
            sativus]
          Length = 311

 Score =  269 bits (688), Expect = 9e-70
 Identities = 144/263 (54%), Positives = 164/263 (62%), Gaps = 3/263 (1%)
 Frame = +1

Query: 397  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 576
            V L EPSK +IYN DGLL+K  DISWP+NVEWIHKLT D+ QE++VDVNDDL REL FYT
Sbjct: 46   VELSEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYT 105

Query: 577  QGLEGTRKAFEKLQKLGLPFLRPSDYYAEMVKTDTHMEKVKSRLLVXXXXXXXXXXXXXX 756
            Q L+GTR A EK Q LGLPFLRPSDYYAEMVKTDTHM+KVK RLL               
Sbjct: 106  QALQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKA 165

Query: 757  XXXXXXXXXVQAQKTKERSKQKKEEIESVKKWRKQRQKSGFAGGENGEDISLPFEDGKGF 936
                     +QAQK KER+KQKKEEIESVKKWRKQRQK+ FAGG+ G D+   FEDGK F
Sbjct: 166  REAKKLAKEIQAQKQKERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTF 225

Query: 937  ERT-QKGRRNVAPXXXXXXXXXXXXXXXXXXXXXXXNSRDH--RDTXXXXXXXXXXXXQN 1107
            ER+  K R  V+P                       N R    RD+            QN
Sbjct: 226  ERSGGKKRPGVSPGDRSGGKARHGGGGGGGGGGGKGNRRKERFRDSKFGFGGRKSLKKQN 285

Query: 1108 TADATNEFKGFNKGDFSGSKKRK 1176
            TAD TN+ +GFN G  S +K+RK
Sbjct: 286  TADTTNDIRGFNNGSLSSNKRRK 308


>ref|XP_004143659.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis
            sativus]
          Length = 312

 Score =  269 bits (688), Expect = 9e-70
 Identities = 144/264 (54%), Positives = 164/264 (62%), Gaps = 4/264 (1%)
 Frame = +1

Query: 397  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 576
            V L EPSK +IYN DGLL+K  DISWP+NVEWIHKLT D+ QE++VDVNDDL REL FYT
Sbjct: 46   VELSEPSKNAIYNADGLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYT 105

Query: 577  QGLEGTRKAFEKLQKLGLPFLRPSDYYAEMVKTDTHMEKVKSRLLVXXXXXXXXXXXXXX 756
            Q L+GTR A EK Q LGLPFLRPSDYYAEMVKTDTHM+KVK RLL               
Sbjct: 106  QALQGTRMALEKFQSLGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKA 165

Query: 757  XXXXXXXXXVQAQKTKERSKQKKEEIESVKKWRKQRQKSGFAGGENGEDISLPFEDGKGF 936
                     +QAQK KER+KQKKEEIESVKKWRKQRQK+ FAGG+ G D+   FEDGK F
Sbjct: 166  REAKKLAKEIQAQKQKERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTF 225

Query: 937  ERT-QKGRRNVAP---XXXXXXXXXXXXXXXXXXXXXXXNSRDHRDTXXXXXXXXXXXXQ 1104
            ER+  K R  V+P                            RD RD+            Q
Sbjct: 226  ERSGGKKRPGVSPGDRSGGKARHGGGGGGGGGGKGKIPKKKRDFRDSKFGFGGRKSLKKQ 285

Query: 1105 NTADATNEFKGFNKGDFSGSKKRK 1176
            NTAD TN+ +GFN G  S +K+RK
Sbjct: 286  NTADTTNDIRGFNNGSLSSNKRRK 309


>ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Ricinus communis]
            gi|223534220|gb|EEF35935.1| rRNA-processing protein EBP2,
            putative [Ricinus communis]
          Length = 307

 Score =  268 bits (686), Expect = 2e-69
 Identities = 139/261 (53%), Positives = 166/261 (63%), Gaps = 1/261 (0%)
 Frame = +1

Query: 397  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 576
            V+L EPSK ++YN+D L +K +DISWP+NV WIHKL+VD+ QEQ+VDVNDDLAREL FYT
Sbjct: 46   VKLSEPSKNAVYNRDALNDKLQDISWPENVSWIHKLSVDIEQEQEVDVNDDLARELAFYT 105

Query: 577  QGLEGTRKAFEKLQKLGLPFLRPSDYYAEMVKTDTHMEKVKSRLLVXXXXXXXXXXXXXX 756
            Q LEGTRKAFEKL+ +GLPFLRPSDYYAEMVK+D HMEKVK RLL               
Sbjct: 106  QALEGTRKAFEKLETMGLPFLRPSDYYAEMVKSDIHMEKVKGRLLAEKRNIEEAEERRKA 165

Query: 757  XXXXXXXXXVQAQKTKERSKQKKEEIESVKKWRKQRQKSGFAGGENGEDISLPFEDGKGF 936
                     +QAQK KER+ QKK EIE+VKKWRKQRQ+SGFAGG+   +++LPFE+G+  
Sbjct: 166  RESKRLAKEIQAQKQKERAAQKKMEIENVKKWRKQRQQSGFAGGDKDGEMNLPFENGEAL 225

Query: 937  ERTQKGRRNVAP-XXXXXXXXXXXXXXXXXXXXXXXNSRDHRDTXXXXXXXXXXXXQNTA 1113
             R  K R  V+P                        N RD RD+            QNTA
Sbjct: 226  GRPNKRRPGVSPGDRSGGKSRQDWKKGSKKGFENKQNKRDARDSRFGYGGRKGLKKQNTA 285

Query: 1114 DATNEFKGFNKGDFSGSKKRK 1176
            D T   +GFNKG   G+KKRK
Sbjct: 286  DTTGNLRGFNKGGLQGNKKRK 306


>ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|222868843|gb|EEF05974.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  264 bits (675), Expect = 3e-68
 Identities = 136/284 (47%), Positives = 170/284 (59%)
 Frame = +1

Query: 325  IVDDDMGDYTXXXXXXXXXXXXXXVRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKL 504
            I DD+M +                V+L EPSK +I+N+DGL +K +DISWP+NV WIHKL
Sbjct: 16   ITDDEMDNLDEKLSGSESESEDEGVKLPEPSKNAIFNRDGLADKLQDISWPENVGWIHKL 75

Query: 505  TVDVNQEQKVDVNDDLARELVFYTQGLEGTRKAFEKLQKLGLPFLRPSDYYAEMVKTDTH 684
             +D NQEQ+VDVNDDL REL FYTQ LEGTR+A+ KL+ +G+PFLRP DYYAEM K+DTH
Sbjct: 76   VIDFNQEQEVDVNDDLTRELAFYTQALEGTRQAYAKLESMGIPFLRPPDYYAEMAKSDTH 135

Query: 685  MEKVKSRLLVXXXXXXXXXXXXXXXXXXXXXXXVQAQKTKERSKQKKEEIESVKKWRKQR 864
            MEKVK RLL                        VQAQK KER+ QKK  IE+VK WRKQR
Sbjct: 136  MEKVKGRLLAEKRSIEEAEERRKARDSKKLAKEVQAQKQKERNAQKKAAIETVKNWRKQR 195

Query: 865  QKSGFAGGENGEDISLPFEDGKGFERTQKGRRNVAPXXXXXXXXXXXXXXXXXXXXXXXN 1044
            ++SGFAGG+   ++ +PFEDGK FER+ K R  V+P                        
Sbjct: 196  KQSGFAGGDKDGELDMPFEDGKVFERSNKKRPGVSPGDRSGGKGRQPWKKGKNGPEKKKF 255

Query: 1045 SRDHRDTXXXXXXXXXXXXQNTADATNEFKGFNKGDFSGSKKRK 1176
             R+ RD+            QNTAD T++F+G  KG  +G+KKRK
Sbjct: 256  KRESRDSKFGFGGRKGLKKQNTADTTDDFRGSKKGSAAGNKKRK 299


>ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Glycine
            max]
          Length = 287

 Score =  262 bits (670), Expect = 1e-67
 Identities = 138/260 (53%), Positives = 167/260 (64%)
 Frame = +1

Query: 397  VRLDEPSKRSIYNKDGLLEKREDISWPDNVEWIHKLTVDVNQEQKVDVNDDLARELVFYT 576
            VRL EPSK ++YN+D LL+K  DISWP NVEWIHKL++DV+QEQ+VDVNDDLAREL FYT
Sbjct: 33   VRLAEPSKNAVYNRDALLDKLGDISWPANVEWIHKLSIDVDQEQEVDVNDDLARELAFYT 92

Query: 577  QGLEGTRKAFEKLQKLGLPFLRPSDYYAEMVKTDTHMEKVKSRLLVXXXXXXXXXXXXXX 756
            Q LEGT++AFEKLQ +GLPFLRP+DYYAEMVKTD HMEKVK RLL               
Sbjct: 93   QALEGTKEAFEKLQSMGLPFLRPADYYAEMVKTDGHMEKVKGRLLSEKRKMEEADERRKA 152

Query: 757  XXXXXXXXXVQAQKTKERSKQKKEEIESVKKWRKQRQKSGFAGGENGEDISLPFEDGKGF 936
                     +QAQK KER+KQKKE+IESVKKWRKQRQ+SG+A      D+   FEDGK F
Sbjct: 153  REAKRLAKEIQAQKLKERAKQKKEDIESVKKWRKQRQQSGYADNGKDADMGFDFEDGKVF 212

Query: 937  ERTQKGRRNVAPXXXXXXXXXXXXXXXXXXXXXXXNSRDHRDTXXXXXXXXXXXXQNTAD 1116
            ER+ K R  V+P                         RD +++            QNTAD
Sbjct: 213  ERSNKKRPGVSP-----GDRSGGKAKQAFGKGKKQKIRDGKNSKFGFGGKKGMKKQNTAD 267

Query: 1117 ATNEFKGFNKGDFSGSKKRK 1176
             TN+F  FNKG  +G+K+++
Sbjct: 268  TTNDFGKFNKGAVAGNKRKR 287