BLASTX nr result
ID: Coptis25_contig00006053
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006053 (1206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285276.2| PREDICTED: transcription initiation factor T... 680 0.0 ref|XP_003631761.1| PREDICTED: transcription initiation factor T... 680 0.0 ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|2... 669 0.0 ref|XP_002515435.1| protein with unknown function [Ricinus commu... 665 0.0 ref|XP_004145505.1| PREDICTED: transcription initiation factor T... 663 0.0 >ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like isoform 1 [Vitis vinifera] Length = 667 Score = 680 bits (1754), Expect = 0.0 Identities = 330/405 (81%), Positives = 361/405 (89%), Gaps = 5/405 (1%) Frame = -3 Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022 SISDDA+ V L+GSSQD A QIN+KEI WGLL S+E+RLEKA L+SDSEK EGE KE Sbjct: 197 SISDDAEVVTLIGSSQDDANQINQKEIHWGLLEGSLEERLEKAGGLLSDSEKAEGEVKET 256 Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842 D +ENKKRS +GGKQG+S+KKLKKDK+VG GK+ R E N VSMAPRVKPEL LPV+PTE Sbjct: 257 DTEENKKRSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVMPTE 316 Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662 VE SILEDLRNRVQL S ALPSV FYTF+NTHN LNCSSIS DGSLV GGFSDSSLKVWD Sbjct: 317 VEQSILEDLRNRVQLSSMALPSVSFYTFINTHNSLNCSSISHDGSLVAGGFSDSSLKVWD 376 Query: 661 MAKIGQ----ATVQGENG-TPTEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497 M+K+GQ + +QG+N PTEQ+LG+ G+RSYTL QGH+GPVYS+TFSPLGDFILSS Sbjct: 377 MSKLGQQAATSIMQGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSS 436 Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317 S+DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR Sbjct: 437 SADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 496 Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137 IMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG Sbjct: 497 IMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDG 556 Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2 +YMASGDE+GTIMMWDLSSGRC+ PLMGH SCVW+L FS EGSLL Sbjct: 557 QYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLL 601 >ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3| unnamed protein product [Vitis vinifera] Length = 676 Score = 680 bits (1754), Expect = 0.0 Identities = 330/405 (81%), Positives = 361/405 (89%), Gaps = 5/405 (1%) Frame = -3 Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022 SISDDA+ V L+GSSQD A QIN+KEI WGLL S+E+RLEKA L+SDSEK EGE KE Sbjct: 204 SISDDAEVVTLIGSSQDDANQINQKEIHWGLLEGSLEERLEKAGGLLSDSEKAEGEVKET 263 Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842 D +ENKKRS +GGKQG+S+KKLKKDK+VG GK+ R E N VSMAPRVKPEL LPV+PTE Sbjct: 264 DTEENKKRSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVMPTE 323 Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662 VE SILEDLRNRVQL S ALPSV FYTF+NTHN LNCSSIS DGSLV GGFSDSSLKVWD Sbjct: 324 VEQSILEDLRNRVQLSSMALPSVSFYTFINTHNSLNCSSISHDGSLVAGGFSDSSLKVWD 383 Query: 661 MAKIGQ----ATVQGENG-TPTEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497 M+K+GQ + +QG+N PTEQ+LG+ G+RSYTL QGH+GPVYS+TFSPLGDFILSS Sbjct: 384 MSKLGQQAATSIMQGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSS 443 Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317 S+DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR Sbjct: 444 SADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 503 Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137 IMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG Sbjct: 504 IMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDG 563 Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2 +YMASGDE+GTIMMWDLSSGRC+ PLMGH SCVW+L FS EGSLL Sbjct: 564 QYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLL 608 >ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|222855648|gb|EEE93195.1| predicted protein [Populus trichocarpa] Length = 675 Score = 669 bits (1726), Expect = 0.0 Identities = 326/406 (80%), Positives = 358/406 (88%), Gaps = 5/406 (1%) Frame = -3 Query: 1204 ISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKE 1025 ISISDD DAV L+GSSQD A QIN+KEI WGLL DS+E+RLEK +SDSEKTEGE KE Sbjct: 202 ISISDDPDAVTLIGSSQDAANQINKKEIHWGLLEDSLEERLEKTGGFLSDSEKTEGETKE 261 Query: 1024 GDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPT 845 GD+DENKKRS DGGKQG S+KK KKDK T K+VR E NTV APRVKPEL LPV+P Sbjct: 262 GDMDENKKRSMDGGKQGASIKKSKKDKAASATAKAVRLEANTVPAAPRVKPELPLPVMPA 321 Query: 844 EVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVW 665 EVE SILEDLRNRVQL S LPSV FYTF+NTHNGLNCSSIS DGSLV GGFSDSSLKVW Sbjct: 322 EVEQSILEDLRNRVQLSSTTLPSVSFYTFINTHNGLNCSSISHDGSLVAGGFSDSSLKVW 381 Query: 664 DMAKIGQ----ATVQGEN-GTPTEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILS 500 DMAK+GQ + +QGEN P+E +LG +G+RSYTL QGH+GPV+S+TFSPLGDFILS Sbjct: 382 DMAKLGQQAGNSILQGENDAAPSEHVLGPNSGKRSYTLFQGHSGPVHSATFSPLGDFILS 441 Query: 499 SSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPL 320 SS+D+T+RLWST+LNANLVCYKGHNYPVWDVQFSP+GHYFAS+SHDRTARIWSMDRIQPL Sbjct: 442 SSADTTVRLWSTELNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRIQPL 501 Query: 319 RIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPD 140 RIMAGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPD Sbjct: 502 RIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPD 561 Query: 139 GRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2 GRYMASGDE+G+IMMWDLSSGRCI+P+MGH SCVW+L FS E SLL Sbjct: 562 GRYMASGDEDGSIMMWDLSSGRCISPMMGHHSCVWSLAFSCESSLL 607 >ref|XP_002515435.1| protein with unknown function [Ricinus communis] gi|223545379|gb|EEF46884.1| protein with unknown function [Ricinus communis] Length = 670 Score = 665 bits (1716), Expect = 0.0 Identities = 326/405 (80%), Positives = 357/405 (88%), Gaps = 5/405 (1%) Frame = -3 Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022 SISDD + V L+GSSQD A QIN+KEI WGLL DS+E+ LEKA L SDSEKTEGE KEG Sbjct: 198 SISDDDEVVTLIGSSQDAANQINKKEIHWGLLEDSMEEHLEKAGGLHSDSEKTEGEAKEG 257 Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842 D+DE+KKRS +GGKQGTSVKK+KKDK T K VR ETN+ APRVKPEL LPV+PTE Sbjct: 258 DMDESKKRSIEGGKQGTSVKKMKKDKATSATAKVVRPETNSAPTAPRVKPELPLPVIPTE 317 Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662 VE SILEDLRNRVQL SAALPSV FYTF+NTHNGLNCSSIS DGSLV GGFSDSSLKVWD Sbjct: 318 VEQSILEDLRNRVQLSSAALPSVSFYTFINTHNGLNCSSISHDGSLVAGGFSDSSLKVWD 377 Query: 661 MAKIGQ----ATVQGENGTP-TEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497 MAK+GQ + +QG N T +E LG+ +RSYTL QGH+GPVYS+TFSPLGDFILSS Sbjct: 378 MAKLGQQGSNSVLQGANDTAASEHFLGANGAKRSYTLFQGHSGPVYSATFSPLGDFILSS 437 Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317 S+D+TIRLWSTKLNANLVCYKGHNYPVWDVQFSP+GHYFAS+SHDRTARIWSMDR+QPLR Sbjct: 438 SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRLQPLR 497 Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137 I+AGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG Sbjct: 498 ILAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 557 Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2 R+MAS DE+GTIMMWDLSSGRC++PLMGH SCVWTL FS EGSLL Sbjct: 558 RFMASADEDGTIMMWDLSSGRCVSPLMGHNSCVWTLAFSCEGSLL 602 >ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like [Cucumis sativus] gi|449485181|ref|XP_004157092.1| PREDICTED: transcription initiation factor TFIID subunit 5-like [Cucumis sativus] Length = 674 Score = 663 bits (1711), Expect = 0.0 Identities = 319/405 (78%), Positives = 360/405 (88%), Gaps = 5/405 (1%) Frame = -3 Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022 SISDDA+ V L GS+QDTA QIN+KE+ WGLL DS+E+RLEKA+ L+SDSEK EGE K+G Sbjct: 199 SISDDAELVTLTGSTQDTANQINKKEVHWGLLEDSLEERLEKAAGLLSDSEKAEGETKDG 258 Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842 DVDENKKR+ +GGKQG S+KK+KKDK TGK++R+E N+ SMAPRVKPEL LP++ TE Sbjct: 259 DVDENKKRTAEGGKQGGSIKKVKKDKTASATGKTLRAEANSASMAPRVKPELALPIISTE 318 Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662 VE SILEDLRNRVQL S ALPSV FYTF+NTHNGLNCSSIS DG+LV GGFSDSSLKVWD Sbjct: 319 VEESILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCSSISYDGALVAGGFSDSSLKVWD 378 Query: 661 MAKIGQ----ATVQGENGTPT-EQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497 MAK+GQ +Q EN T + + G +G+R YTL QGH+GPV+S+TFSP+GDF+LSS Sbjct: 379 MAKLGQQAGNTVLQDENDMSTSDPVTGHTSGKRPYTLFQGHSGPVHSATFSPIGDFVLSS 438 Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317 S+D+TIRLWSTKLNANLVCYKGHNYPVWDVQFSP+GHYFAS SHDRTARIWSMDRIQPLR Sbjct: 439 SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASCSHDRTARIWSMDRIQPLR 498 Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137 IMAGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG Sbjct: 499 IMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 558 Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2 R+MASGDE+GTIMMWDLS+GRC+TPL+GHTSCVWTL FS EGSLL Sbjct: 559 RFMASGDEDGTIMMWDLSTGRCVTPLIGHTSCVWTLAFSCEGSLL 603