BLASTX nr result
ID: Coptis25_contig00006053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006053
(1206 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285276.2| PREDICTED: transcription initiation factor T... 680 0.0
ref|XP_003631761.1| PREDICTED: transcription initiation factor T... 680 0.0
ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|2... 669 0.0
ref|XP_002515435.1| protein with unknown function [Ricinus commu... 665 0.0
ref|XP_004145505.1| PREDICTED: transcription initiation factor T... 663 0.0
>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform 1 [Vitis vinifera]
Length = 667
Score = 680 bits (1754), Expect = 0.0
Identities = 330/405 (81%), Positives = 361/405 (89%), Gaps = 5/405 (1%)
Frame = -3
Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022
SISDDA+ V L+GSSQD A QIN+KEI WGLL S+E+RLEKA L+SDSEK EGE KE
Sbjct: 197 SISDDAEVVTLIGSSQDDANQINQKEIHWGLLEGSLEERLEKAGGLLSDSEKAEGEVKET 256
Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842
D +ENKKRS +GGKQG+S+KKLKKDK+VG GK+ R E N VSMAPRVKPEL LPV+PTE
Sbjct: 257 DTEENKKRSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVMPTE 316
Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662
VE SILEDLRNRVQL S ALPSV FYTF+NTHN LNCSSIS DGSLV GGFSDSSLKVWD
Sbjct: 317 VEQSILEDLRNRVQLSSMALPSVSFYTFINTHNSLNCSSISHDGSLVAGGFSDSSLKVWD 376
Query: 661 MAKIGQ----ATVQGENG-TPTEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497
M+K+GQ + +QG+N PTEQ+LG+ G+RSYTL QGH+GPVYS+TFSPLGDFILSS
Sbjct: 377 MSKLGQQAATSIMQGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSS 436
Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317
S+DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR
Sbjct: 437 SADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 496
Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137
IMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG
Sbjct: 497 IMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDG 556
Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2
+YMASGDE+GTIMMWDLSSGRC+ PLMGH SCVW+L FS EGSLL
Sbjct: 557 QYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLL 601
>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
unnamed protein product [Vitis vinifera]
Length = 676
Score = 680 bits (1754), Expect = 0.0
Identities = 330/405 (81%), Positives = 361/405 (89%), Gaps = 5/405 (1%)
Frame = -3
Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022
SISDDA+ V L+GSSQD A QIN+KEI WGLL S+E+RLEKA L+SDSEK EGE KE
Sbjct: 204 SISDDAEVVTLIGSSQDDANQINQKEIHWGLLEGSLEERLEKAGGLLSDSEKAEGEVKET 263
Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842
D +ENKKRS +GGKQG+S+KKLKKDK+VG GK+ R E N VSMAPRVKPEL LPV+PTE
Sbjct: 264 DTEENKKRSAEGGKQGSSIKKLKKDKVVGAAGKTARPEANAVSMAPRVKPELALPVMPTE 323
Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662
VE SILEDLRNRVQL S ALPSV FYTF+NTHN LNCSSIS DGSLV GGFSDSSLKVWD
Sbjct: 324 VEQSILEDLRNRVQLSSMALPSVSFYTFINTHNSLNCSSISHDGSLVAGGFSDSSLKVWD 383
Query: 661 MAKIGQ----ATVQGENG-TPTEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497
M+K+GQ + +QG+N PTEQ+LG+ G+RSYTL QGH+GPVYS+TFSPLGDFILSS
Sbjct: 384 MSKLGQQAATSIMQGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSS 443
Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317
S+DSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR
Sbjct: 444 SADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 503
Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137
IMAGHLSDVDCV+WH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG
Sbjct: 504 IMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDG 563
Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2
+YMASGDE+GTIMMWDLSSGRC+ PLMGH SCVW+L FS EGSLL
Sbjct: 564 QYMASGDEDGTIMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLL 608
>ref|XP_002309672.1| predicted protein [Populus trichocarpa] gi|222855648|gb|EEE93195.1|
predicted protein [Populus trichocarpa]
Length = 675
Score = 669 bits (1726), Expect = 0.0
Identities = 326/406 (80%), Positives = 358/406 (88%), Gaps = 5/406 (1%)
Frame = -3
Query: 1204 ISISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKE 1025
ISISDD DAV L+GSSQD A QIN+KEI WGLL DS+E+RLEK +SDSEKTEGE KE
Sbjct: 202 ISISDDPDAVTLIGSSQDAANQINKKEIHWGLLEDSLEERLEKTGGFLSDSEKTEGETKE 261
Query: 1024 GDVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPT 845
GD+DENKKRS DGGKQG S+KK KKDK T K+VR E NTV APRVKPEL LPV+P
Sbjct: 262 GDMDENKKRSMDGGKQGASIKKSKKDKAASATAKAVRLEANTVPAAPRVKPELPLPVMPA 321
Query: 844 EVEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVW 665
EVE SILEDLRNRVQL S LPSV FYTF+NTHNGLNCSSIS DGSLV GGFSDSSLKVW
Sbjct: 322 EVEQSILEDLRNRVQLSSTTLPSVSFYTFINTHNGLNCSSISHDGSLVAGGFSDSSLKVW 381
Query: 664 DMAKIGQ----ATVQGEN-GTPTEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILS 500
DMAK+GQ + +QGEN P+E +LG +G+RSYTL QGH+GPV+S+TFSPLGDFILS
Sbjct: 382 DMAKLGQQAGNSILQGENDAAPSEHVLGPNSGKRSYTLFQGHSGPVHSATFSPLGDFILS 441
Query: 499 SSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPL 320
SS+D+T+RLWST+LNANLVCYKGHNYPVWDVQFSP+GHYFAS+SHDRTARIWSMDRIQPL
Sbjct: 442 SSADTTVRLWSTELNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRIQPL 501
Query: 319 RIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPD 140
RIMAGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPD
Sbjct: 502 RIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPD 561
Query: 139 GRYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2
GRYMASGDE+G+IMMWDLSSGRCI+P+MGH SCVW+L FS E SLL
Sbjct: 562 GRYMASGDEDGSIMMWDLSSGRCISPMMGHHSCVWSLAFSCESSLL 607
>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
gi|223545379|gb|EEF46884.1| protein with unknown function
[Ricinus communis]
Length = 670
Score = 665 bits (1716), Expect = 0.0
Identities = 326/405 (80%), Positives = 357/405 (88%), Gaps = 5/405 (1%)
Frame = -3
Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022
SISDD + V L+GSSQD A QIN+KEI WGLL DS+E+ LEKA L SDSEKTEGE KEG
Sbjct: 198 SISDDDEVVTLIGSSQDAANQINKKEIHWGLLEDSMEEHLEKAGGLHSDSEKTEGEAKEG 257
Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842
D+DE+KKRS +GGKQGTSVKK+KKDK T K VR ETN+ APRVKPEL LPV+PTE
Sbjct: 258 DMDESKKRSIEGGKQGTSVKKMKKDKATSATAKVVRPETNSAPTAPRVKPELPLPVIPTE 317
Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662
VE SILEDLRNRVQL SAALPSV FYTF+NTHNGLNCSSIS DGSLV GGFSDSSLKVWD
Sbjct: 318 VEQSILEDLRNRVQLSSAALPSVSFYTFINTHNGLNCSSISHDGSLVAGGFSDSSLKVWD 377
Query: 661 MAKIGQ----ATVQGENGTP-TEQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497
MAK+GQ + +QG N T +E LG+ +RSYTL QGH+GPVYS+TFSPLGDFILSS
Sbjct: 378 MAKLGQQGSNSVLQGANDTAASEHFLGANGAKRSYTLFQGHSGPVYSATFSPLGDFILSS 437
Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317
S+D+TIRLWSTKLNANLVCYKGHNYPVWDVQFSP+GHYFAS+SHDRTARIWSMDR+QPLR
Sbjct: 438 SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDRLQPLR 497
Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137
I+AGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG
Sbjct: 498 ILAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 557
Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2
R+MAS DE+GTIMMWDLSSGRC++PLMGH SCVWTL FS EGSLL
Sbjct: 558 RFMASADEDGTIMMWDLSSGRCVSPLMGHNSCVWTLAFSCEGSLL 602
>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Cucumis sativus] gi|449485181|ref|XP_004157092.1|
PREDICTED: transcription initiation factor TFIID subunit
5-like [Cucumis sativus]
Length = 674
Score = 663 bits (1711), Expect = 0.0
Identities = 319/405 (78%), Positives = 360/405 (88%), Gaps = 5/405 (1%)
Frame = -3
Query: 1201 SISDDADAVILVGSSQDTAKQINEKEIRWGLLVDSIEDRLEKASSLMSDSEKTEGEFKEG 1022
SISDDA+ V L GS+QDTA QIN+KE+ WGLL DS+E+RLEKA+ L+SDSEK EGE K+G
Sbjct: 199 SISDDAELVTLTGSTQDTANQINKKEVHWGLLEDSLEERLEKAAGLLSDSEKAEGETKDG 258
Query: 1021 DVDENKKRSGDGGKQGTSVKKLKKDKIVGTTGKSVRSETNTVSMAPRVKPELTLPVLPTE 842
DVDENKKR+ +GGKQG S+KK+KKDK TGK++R+E N+ SMAPRVKPEL LP++ TE
Sbjct: 259 DVDENKKRTAEGGKQGGSIKKVKKDKTASATGKTLRAEANSASMAPRVKPELALPIISTE 318
Query: 841 VEHSILEDLRNRVQLGSAALPSVCFYTFLNTHNGLNCSSIS*DGSLVTGGFSDSSLKVWD 662
VE SILEDLRNRVQL S ALPSV FYTF+NTHNGLNCSSIS DG+LV GGFSDSSLKVWD
Sbjct: 319 VEESILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCSSISYDGALVAGGFSDSSLKVWD 378
Query: 661 MAKIGQ----ATVQGENGTPT-EQLLGSENGRRSYTLLQGHAGPVYSSTFSPLGDFILSS 497
MAK+GQ +Q EN T + + G +G+R YTL QGH+GPV+S+TFSP+GDF+LSS
Sbjct: 379 MAKLGQQAGNTVLQDENDMSTSDPVTGHTSGKRPYTLFQGHSGPVHSATFSPIGDFVLSS 438
Query: 496 SSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLR 317
S+D+TIRLWSTKLNANLVCYKGHNYPVWDVQFSP+GHYFAS SHDRTARIWSMDRIQPLR
Sbjct: 439 SADTTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASCSHDRTARIWSMDRIQPLR 498
Query: 316 IMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 137
IMAGHLSDVDCV+WHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG
Sbjct: 499 IMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 558
Query: 136 RYMASGDEEGTIMMWDLSSGRCITPLMGHTSCVWTLDFSGEGSLL 2
R+MASGDE+GTIMMWDLS+GRC+TPL+GHTSCVWTL FS EGSLL
Sbjct: 559 RFMASGDEDGTIMMWDLSTGRCVTPLIGHTSCVWTLAFSCEGSLL 603