BLASTX nr result

ID: Coptis25_contig00006048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006048
         (1641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276552.1| PREDICTED: uncharacterized GPI-anchored prot...   463   e-128
emb|CBI18008.3| unnamed protein product [Vitis vinifera]              450   e-124
ref|XP_002518003.1| conserved hypothetical protein [Ricinus comm...   431   e-118
ref|XP_004136804.1| PREDICTED: uncharacterized GPI-anchored prot...   419   e-114
ref|XP_002326107.1| predicted protein [Populus trichocarpa] gi|1...   413   e-113

>ref|XP_002276552.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis
            vinifera]
          Length = 324

 Score =  463 bits (1192), Expect = e-128
 Identities = 234/316 (74%), Positives = 265/316 (83%), Gaps = 8/316 (2%)
 Frame = -2

Query: 1319 MSLTPTLKSFILL---FTLLTPSLA---ITDNKAHDQPLNPSNYTTPNTVPAYPVQTQAQ 1158
            M ++P   SF+ L     L  PSLA        +H QP+ P +Y+TPNTVPA+PVQT+ Q
Sbjct: 1    MEISPCAVSFVCLVFVLCLFEPSLAGLLAEPADSHQQPMKPGDYSTPNTVPAFPVQTETQ 60

Query: 1157 TCHLDLSAELFGGVGQACGRNLDRSRCCPVLAAWLFAAHARTALQISEPMPSSTDDGVQP 978
            TC LDLSAELFGGV  ACGRNLDRSRCCPVLAAWLFAAHAR+ALQ++ P P+S+D    P
Sbjct: 61   TCRLDLSAELFGGVNDACGRNLDRSRCCPVLAAWLFAAHARSALQVAAPAPASSD---LP 117

Query: 977  MMPDDSQKCVNSLQTSLQGRNIHIPQPNATCDPILCFCGIRLHQISSLSCPAAFNVTAYH 798
            MMPDDSQKCVNSLQ+SLQ RNIHIPQPNATCD ILCFCGIRLHQI+SLSCPAAFN+++Y 
Sbjct: 118  MMPDDSQKCVNSLQSSLQSRNIHIPQPNATCDAILCFCGIRLHQITSLSCPAAFNISSYR 177

Query: 797  NATPTAAVNNLEQNCRNSSYAGCTRCLGALEKLKG-GRNGTEVEGSDRAKKMFNRDCQLM 621
            NATPTAAV NLE+NCRNSSY+GCT+CLGAL+KLKG G+NGTE EG DRA KMF+RDCQLM
Sbjct: 178  NATPTAAVKNLERNCRNSSYSGCTKCLGALQKLKGDGKNGTE-EGGDRASKMFSRDCQLM 236

Query: 620  GLTWLLARNKTAYIPTVSAVLRAIMYSAH-PHESRCSPDQENMPLAVDSLQFQKYESSFS 444
            GLTWLLARNKTAYIPTVSAVLRAIMYSAH PHES+CSPDQENMPLAVDSLQF+K  SS S
Sbjct: 237  GLTWLLARNKTAYIPTVSAVLRAIMYSAHPPHESKCSPDQENMPLAVDSLQFEK-SSSSS 295

Query: 443  TSHDLFLFTCLPLLSF 396
            +S  +  F+ LP+ SF
Sbjct: 296  SSTTISPFSSLPIFSF 311


>emb|CBI18008.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  450 bits (1157), Expect = e-124
 Identities = 221/278 (79%), Positives = 248/278 (89%), Gaps = 2/278 (0%)
 Frame = -2

Query: 1223 LNPSNYTTPNTVPAYPVQTQAQTCHLDLSAELFGGVGQACGRNLDRSRCCPVLAAWLFAA 1044
            + P +Y+TPNTVPA+PVQT+ QTC LDLSAELFGGV  ACGRNLDRSRCCPVLAAWLFAA
Sbjct: 1    MKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFGGVNDACGRNLDRSRCCPVLAAWLFAA 60

Query: 1043 HARTALQISEPMPSSTDDGVQPMMPDDSQKCVNSLQTSLQGRNIHIPQPNATCDPILCFC 864
            HAR+ALQ++ P P+S+D    PMMPDDSQKCVNSLQ+SLQ RNIHIPQPNATCD ILCFC
Sbjct: 61   HARSALQVAAPAPASSD---LPMMPDDSQKCVNSLQSSLQSRNIHIPQPNATCDAILCFC 117

Query: 863  GIRLHQISSLSCPAAFNVTAYHNATPTAAVNNLEQNCRNSSYAGCTRCLGALEKLKG-GR 687
            GIRLHQI+SLSCPAAFN+++Y NATPTAAV NLE+NCRNSSY+GCT+CLGAL+KLKG G+
Sbjct: 118  GIRLHQITSLSCPAAFNISSYRNATPTAAVKNLERNCRNSSYSGCTKCLGALQKLKGDGK 177

Query: 686  NGTEVEGSDRAKKMFNRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSAH-PHESRCSP 510
            NGTE EG DRA KMF+RDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSAH PHES+CSP
Sbjct: 178  NGTE-EGGDRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSAHPPHESKCSP 236

Query: 509  DQENMPLAVDSLQFQKYESSFSTSHDLFLFTCLPLLSF 396
            DQENMPLAVDSLQF+K  SS S+S  +  F+ LP+ SF
Sbjct: 237  DQENMPLAVDSLQFEK-SSSSSSSTTISPFSSLPIFSF 273


>ref|XP_002518003.1| conserved hypothetical protein [Ricinus communis]
            gi|223542985|gb|EEF44521.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 318

 Score =  431 bits (1107), Expect = e-118
 Identities = 221/314 (70%), Positives = 253/314 (80%), Gaps = 8/314 (2%)
 Frame = -2

Query: 1295 SFILLFTLLTPSLA---ITDNKAHDQPLNPSNYTTPNTVPAYPVQTQAQTCHLDLSAELF 1125
            S I+ F L TPSLA          +QPL P +Y++PNTVPA+PVQT++Q C LDLSAELF
Sbjct: 6    SVIIFFYLFTPSLAGLLAEPVSGSNQPLKPGDYSSPNTVPAFPVQTESQVCRLDLSAELF 65

Query: 1124 GGVGQACGRNLDRSRCCPVLAAWLFAAHARTALQISEPMPSSTDDGVQPMMPDDSQKCVN 945
            GGV  ACGR LDRSRCCPVLAAWLFAAHAR ALQ+S   P+S ++ + PMMPDDSQKCVN
Sbjct: 66   GGVNDACGRELDRSRCCPVLAAWLFAAHARYALQVSASAPASAEEDL-PMMPDDSQKCVN 124

Query: 944  SLQTSLQGRNIHIPQPNATCDPILCFCGIRLHQISSLSCPAAFNVTA-YHNATPTAAVNN 768
            SLQ++L  RN+ IPQPNA+CD ILCFCGIRLHQI+SLSCPAAFNV++ +HNATPTAAV N
Sbjct: 125  SLQSALLSRNVKIPQPNASCDAILCFCGIRLHQITSLSCPAAFNVSSGFHNATPTAAVKN 184

Query: 767  LEQNCRNSSYAGCTRCLGALEKLKGGRNGTEVEG--SDRAKKMFNRDCQLMGLTWLLARN 594
            LE+NC+NSSY+GCT+CLGAL+KLKG  N T   G   DRA KMFNRDCQLMGLTWLLARN
Sbjct: 185  LEKNCKNSSYSGCTKCLGALQKLKGS-NKTVTGGGRDDRANKMFNRDCQLMGLTWLLARN 243

Query: 593  KTAYIPTVSAVLRAIMYSAH-PHESRCSPDQENMPLAVDSLQFQKYES-SFSTSHDLFLF 420
            KTAYIPTVSAVLRAIMYSAH PHES+CSPDQENMPLAVDSL F   +S S S S  LF F
Sbjct: 244  KTAYIPTVSAVLRAIMYSAHPPHESKCSPDQENMPLAVDSLHFGNAQSYSTSLSRSLFGF 303

Query: 419  TCLPLLSFVLFFRF 378
              LP++  VL + +
Sbjct: 304  PVLPIIILVLLYGY 317


>ref|XP_004136804.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like
            [Cucumis sativus]
          Length = 322

 Score =  419 bits (1077), Expect = e-114
 Identities = 216/306 (70%), Positives = 243/306 (79%), Gaps = 9/306 (2%)
 Frame = -2

Query: 1292 FILLFTLLTPSLA---ITDNKAHDQPLNPSNYTTPNTVPAYPVQTQAQTCHLDLSAELFG 1122
            F+ + T L  S A   I       QPLNP  Y++PNTVPA+PVQTQ Q CHLDLS ELFG
Sbjct: 15   FLCIATNLHSSSAGFLIEPVSGQSQPLNPGQYSSPNTVPAFPVQTQMQICHLDLSDELFG 74

Query: 1121 GVGQACGRNLDRSRCCPVLAAWLFAAHARTALQISEPMPSSTDDGVQPMMPDDSQKCVNS 942
            GV +ACGR+LDRSRCCPVLAAWLFAAHAR AL+I+ P P+S  D   PMMPDDSQKCVNS
Sbjct: 75   GVREACGRDLDRSRCCPVLAAWLFAAHARAALKIAAPAPASAAD--LPMMPDDSQKCVNS 132

Query: 941  LQTSLQGRNIHIPQPNATCDPILCFCGIRLHQISSLSCPAAFNVT-----AYHNATPTAA 777
            LQTSL  RNI IPQPNA+CD +LCFCGIRLHQISSLSCPAAFNV+     AY NATPTAA
Sbjct: 133  LQTSLLSRNIRIPQPNASCDAVLCFCGIRLHQISSLSCPAAFNVSGGGNGAYRNATPTAA 192

Query: 776  VNNLEQNCRNSSYAGCTRCLGALEKLKGGRNGTEVEGSDRAKKMFNRDCQLMGLTWLLAR 597
            V NLE+NCRNSSY+GCT+CLGAL+K+ G +  +    +DRA KMFNRDCQLMGLTWLLAR
Sbjct: 193  VRNLEKNCRNSSYSGCTKCLGALQKVTGTKKNS---SNDRASKMFNRDCQLMGLTWLLAR 249

Query: 596  NKTAYIPTVSAVLRAIMYSAH-PHESRCSPDQENMPLAVDSLQFQKYESSFSTSHDLFLF 420
            NKT YIPTVSAVLRAIMY+AH PH+S CSPDQENMPLAVDSLQ +K +SS   S  + LF
Sbjct: 250  NKTTYIPTVSAVLRAIMYTAHPPHQSTCSPDQENMPLAVDSLQMEKAQSSSPPS--ISLF 307

Query: 419  TCLPLL 402
              +PLL
Sbjct: 308  PIIPLL 313


>ref|XP_002326107.1| predicted protein [Populus trichocarpa] gi|118488098|gb|ABK95869.1|
            unknown [Populus trichocarpa] gi|222862982|gb|EEF00489.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  413 bits (1061), Expect = e-113
 Identities = 214/319 (67%), Positives = 249/319 (78%), Gaps = 12/319 (3%)
 Frame = -2

Query: 1304 TLKSFILLFTLLTPSLAITDNKAHDQPLNPSNYTTPNTVPAYPVQTQAQTCHLDLSAELF 1125
            T+  F  LFT    S         +QPL P +Y+ PNTVPA+PVQT++Q CHLDLSAELF
Sbjct: 6    TIFLFTSLFTHSLSSFLSEPVSGQNQPLKPGDYSNPNTVPAFPVQTESQICHLDLSAELF 65

Query: 1124 GGVGQACGRNLDRSRCCPVLAAWLFAAHARTALQISEPMPSSTDDGVQPMMPDDSQKCVN 945
            GGV  ACGR+LDRSRCCPVLAAWLFAAHAR+ALQ+  P P+S  D   PMMPDDSQKCVN
Sbjct: 66   GGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVQAPAPTSAPD--LPMMPDDSQKCVN 123

Query: 944  SLQTSLQGRNIHIPQPNATCDPILCFCGIRLHQISSLSCPAAFNV-TAYHNATPTAAVNN 768
            SLQ++L  +N+ + QPNA+CD ILCFCGIRLHQISSLSCPAAFNV +A+HNATPTAAV N
Sbjct: 124  SLQSALLSKNVKLAQPNASCDAILCFCGIRLHQISSLSCPAAFNVSSAFHNATPTAAVKN 183

Query: 767  LEQNCRNSSYAGCTRCLGALEKLKGGRNGTEVEGS--DRAKKMFNRDCQLMGLTWLLARN 594
            LE+NC+NS+Y+GCT+CLGAL+KLK  +N T+ + +  +RA KMF RDCQLMGLTWLLARN
Sbjct: 184  LEKNCKNSTYSGCTKCLGALQKLK-AKNETQDKSTRDERASKMFERDCQLMGLTWLLARN 242

Query: 593  KTAYIPTVSAVLRAIMYSAHP--HESRCSPDQENMPLAVDSLQFQKYESSFS----TSHD 432
            KT YIPTVSAVLRAIMYS HP  HES+CSPDQENMPLAVDSLQF K +SS S    +S  
Sbjct: 243  KTQYIPTVSAVLRAIMYSTHPPVHESKCSPDQENMPLAVDSLQFGKAQSSSSSRLTSSSS 302

Query: 431  LF---LFTCLPLLSFVLFF 384
            L+    F  LPL+  V  F
Sbjct: 303  LWSGLRFHVLPLMILVSLF 321


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