BLASTX nr result

ID: Coptis25_contig00006038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006038
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802...   239   1e-60
emb|CBI32690.3| unnamed protein product [Vitis vinifera]              226   8e-57
ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258...   226   8e-57
ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|2...   220   6e-55
ref|XP_002880029.1| ribonuclease P family protein [Arabidopsis l...   211   5e-52

>ref|XP_003537892.1| PREDICTED: uncharacterized protein LOC100802747 [Glycine max]
          Length = 300

 Score =  239 bits (610), Expect = 1e-60
 Identities = 115/195 (58%), Positives = 148/195 (75%), Gaps = 1/195 (0%)
 Frame = -2

Query: 926 WSAQLSEKVDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRG-ASVARFKAKQ 750
           +SA+    +D  LHEL QKGD A  YM GS+ + IDN  LLD +VQGR  +S ++ +A Q
Sbjct: 104 FSAERGGSIDGILHELLQKGDAAHKYMQGSRNMKIDNWILLDNYVQGRVLSSGSQARALQ 163

Query: 749 GHLKRCRRHMSMKQHRKCGSFDFPPESRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARC 570
            H KR ++HMSMK+H+K GS D P E +KF+IF+PMHEMWK+Y++ L+K+ G  Q +A+C
Sbjct: 164 LHSKRSKKHMSMKRHKKDGSLDLPQEFQKFDIFKPMHEMWKDYIMLLLKSTGKNQ-LAQC 222

Query: 569 LLHADLHGAIFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQAD 390
           LL ADLHGA   V ECK+T + G+ GIM+RETAE FGIIT DNKF+VVPK+ SVF+FQ D
Sbjct: 223 LLGADLHGAFILVVECKITHFTGICGIMIRETAEAFGIITEDNKFRVVPKKVSVFVFQVD 282

Query: 389 CWKITLHGDELVSRK 345
           CWK+TLHGD+L SRK
Sbjct: 283 CWKVTLHGDKLGSRK 297


>emb|CBI32690.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  226 bits (577), Expect = 8e-57
 Identities = 106/184 (57%), Positives = 139/184 (75%)
 Frame = -2

Query: 899 DNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVARFKAKQGHLKRCRRHM 720
           D  LH+L + GD A  YM GS+ +  DN  LLD  VQGRGAS AR +    H K  R+H+
Sbjct: 120 DKILHDLLKNGDSAHKYMMGSRSMKFDNWILLDNVVQGRGASGARIRDLLSHSKNSRKHI 179

Query: 719 SMKQHRKCGSFDFPPESRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARCLLHADLHGAI 540
           SMKQ+++CGS + P E  +++IF+PMH+MWK Y+++L+KN G  Q + + LL ADLHGAI
Sbjct: 180 SMKQNKRCGSLNLPQELHRYDIFKPMHDMWKGYMMQLLKNTGKNQ-LVQPLLSADLHGAI 238

Query: 539 FRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLHGDE 360
             V ECK+ ++ GVSGIM+RETAET GIIT+D+KF+VVPK+GSVF+FQADCWK+TL GD+
Sbjct: 239 ILVVECKIAAFNGVSGIMIRETAETLGIITQDDKFRVVPKKGSVFIFQADCWKVTLQGDK 298

Query: 359 LVSR 348
           L SR
Sbjct: 299 LTSR 302


>ref|XP_002275005.1| PREDICTED: uncharacterized protein LOC100258470 [Vitis vinifera]
          Length = 300

 Score =  226 bits (577), Expect = 8e-57
 Identities = 106/184 (57%), Positives = 139/184 (75%)
 Frame = -2

Query: 899 DNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVARFKAKQGHLKRCRRHM 720
           D  LH+L + GD A  YM GS+ +  DN  LLD  VQGRGAS AR +    H K  R+H+
Sbjct: 114 DKILHDLLKNGDSAHKYMMGSRSMKFDNWILLDNVVQGRGASGARIRDLLSHSKNSRKHI 173

Query: 719 SMKQHRKCGSFDFPPESRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARCLLHADLHGAI 540
           SMKQ+++CGS + P E  +++IF+PMH+MWK Y+++L+KN G  Q + + LL ADLHGAI
Sbjct: 174 SMKQNKRCGSLNLPQELHRYDIFKPMHDMWKGYMMQLLKNTGKNQ-LVQPLLSADLHGAI 232

Query: 539 FRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLHGDE 360
             V ECK+ ++ GVSGIM+RETAET GIIT+D+KF+VVPK+GSVF+FQADCWK+TL GD+
Sbjct: 233 ILVVECKIAAFNGVSGIMIRETAETLGIITQDDKFRVVPKKGSVFIFQADCWKVTLQGDK 292

Query: 359 LVSR 348
           L SR
Sbjct: 293 LTSR 296


>ref|XP_002297721.1| predicted protein [Populus trichocarpa] gi|222844979|gb|EEE82526.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  220 bits (561), Expect = 6e-55
 Identities = 103/185 (55%), Positives = 140/185 (75%)
 Frame = -2

Query: 902 VDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVARFKAKQGHLKRCRRH 723
           VD  LHELFQ GD +Q YM GS+ I IDN  LLD +V  +    ++ +A Q + K  RRH
Sbjct: 103 VDKILHELFQHGDASQKYMQGSRNIKIDNWILLDNYVPSKSTG-SQTRASQSNPKHSRRH 161

Query: 722 MSMKQHRKCGSFDFPPESRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARCLLHADLHGA 543
           MSMKQH+K G F+ P + +KF++++PMHE+WK+Y+++L+K  G  + + +CLL ADLHGA
Sbjct: 162 MSMKQHKKLGMFNLPQDLQKFDVYKPMHEIWKDYMMQLLKKTGRNE-LPKCLLSADLHGA 220

Query: 542 IFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLHGD 363
              VA+CK+ S+ G+SGIM+RETAETFGIIT+D+K +VVPK+ SVF+FQ DCWKIT+ GD
Sbjct: 221 AILVADCKIKSFTGISGIMIRETAETFGIITQDSKLKVVPKKLSVFIFQIDCWKITMLGD 280

Query: 362 ELVSR 348
           +L SR
Sbjct: 281 KLSSR 285


>ref|XP_002880029.1| ribonuclease P family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325868|gb|EFH56288.1| ribonuclease P family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 295

 Score =  211 bits (536), Expect = 5e-52
 Identities = 103/185 (55%), Positives = 132/185 (71%)
 Frame = -2

Query: 902 VDNTLHELFQKGDVAQNYMHGSKVINIDNRFLLDGFVQGRGASVARFKAKQGHLKRCRRH 723
           VD  LH L + GD AQ Y+ G+K + +DN  LLD FVQ R ++    KA Q   KR R  
Sbjct: 106 VDKVLHNLLRSGDSAQKYLQGTKSVKLDNYILLDNFVQSRSSASGSKKASQKDSKRSRSR 165

Query: 722 MSMKQHRKCGSFDFPPESRKFEIFEPMHEMWKEYVLKLIKNPGNTQNIARCLLHADLHGA 543
           MSMK+ +K G+   P + +KF++F+PMH MW+ Y++KLIK  G  Q ++  LL ADLHGA
Sbjct: 166 MSMKRLKKSGALHMPKDLQKFDLFKPMHCMWESYMMKLIKVTGKIQ-LSLTLLSADLHGA 224

Query: 542 IFRVAECKVTSYLGVSGIMVRETAETFGIITRDNKFQVVPKRGSVFLFQADCWKITLHGD 363
              VAECK+ S+ GV GIMVRET+ETFGIITRD+KF+VVPK+ SVF+ Q DCWKITLHGD
Sbjct: 225 FMFVAECKIASFTGVQGIMVRETSETFGIITRDDKFRVVPKKLSVFIIQLDCWKITLHGD 284

Query: 362 ELVSR 348
           + +SR
Sbjct: 285 KFISR 289


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