BLASTX nr result
ID: Coptis25_contig00006031
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00006031 (847 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis... 389 e-106 emb|CBI37538.3| unnamed protein product [Vitis vinifera] 381 e-103 ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2... 374 e-101 ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put... 372 e-101 ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glyci... 365 7e-99 >ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera] Length = 552 Score = 389 bits (999), Expect = e-106 Identities = 178/251 (70%), Positives = 215/251 (85%) Frame = -2 Query: 756 MPIEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 577 MPIEMP GLPFSVDTW+PSS +KRHHFLTHAHKDHSSGI+ H++YPIYSTH+TKT++LQQ Sbjct: 1 MPIEMPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQ 60 Query: 576 YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 397 YPQLD SLFV IE+G +V++DPDG F V+AFDANHCPGA+MFLFEG+FGNILHTGDCRL Sbjct: 61 YPQLDDSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRL 120 Query: 396 TPECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPSKESAIRQVINCIRKHPNA 217 PECLQNLP+KYV +KG+EPKC D +FLDCTFG + + PSK AI+QVINCI KHP+A Sbjct: 121 IPECLQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDA 180 Query: 216 PVVYLTCDLLAQDKLLVEVSRRFGSKVYVDRINNAECFQALTITAPEVLTEDESSRFQIF 37 P+VYL D+L Q+++L+ VSR FGSK++VD+ NN ECFQALT PE+L++D SSRFQ+F Sbjct: 181 PIVYLCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVF 240 Query: 36 EGGFNKFYDRA 4 E GF K +RA Sbjct: 241 E-GFPKLCERA 250 >emb|CBI37538.3| unnamed protein product [Vitis vinifera] Length = 558 Score = 381 bits (978), Expect = e-103 Identities = 174/247 (70%), Positives = 211/247 (85%) Frame = -2 Query: 744 MPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQYPQL 565 MP GLPFSVDTW+PSS +KRHHFLTHAHKDHSSGI+ H++YPIYSTH+TKT++LQQYPQL Sbjct: 39 MPRGLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAYPIYSTHLTKTLILQQYPQL 98 Query: 564 DASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRLTPEC 385 D SLFV IE+G +V++DPDG F V+AFDANHCPGA+MFLFEG+FGNILHTGDCRL PEC Sbjct: 99 DDSLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGNILHTGDCRLIPEC 158 Query: 384 LQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPSKESAIRQVINCIRKHPNAPVVY 205 LQNLP+KYV +KG+EPKC D +FLDCTFG + + PSK AI+QVINCI KHP+AP+VY Sbjct: 159 LQNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAPIVY 218 Query: 204 LTCDLLAQDKLLVEVSRRFGSKVYVDRINNAECFQALTITAPEVLTEDESSRFQIFEGGF 25 L D+L Q+++L+ VSR FGSK++VD+ NN ECFQALT PE+L++D SSRFQ+FE GF Sbjct: 219 LCSDMLGQEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFE-GF 277 Query: 24 NKFYDRA 4 K +RA Sbjct: 278 PKLCERA 284 >ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1| predicted protein [Populus trichocarpa] Length = 537 Score = 374 bits (959), Expect = e-101 Identities = 174/252 (69%), Positives = 207/252 (82%) Frame = -2 Query: 756 MPIEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 577 MPIE+P GLPFSVDTWSP+S RKRHHFLTHAHKDH+SGI H+ YPIY+TH+TK +VLQ Sbjct: 1 MPIELPRGLPFSVDTWSPNSKRKRHHFLTHAHKDHTSGILTHSCYPIYATHLTKLLVLQN 60 Query: 576 YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 397 YPQL+ SLFV IE+G VV DPDG F V+AFDANHCPGA+MFLFEGNFGNILHTGDCRL Sbjct: 61 YPQLEGSLFVGIEVGESVVFNDPDGEFKVTAFDANHCPGAVMFLFEGNFGNILHTGDCRL 120 Query: 396 TPECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPSKESAIRQVINCIRKHPNA 217 TPE ++ LPEKY+ +KG+EP+C LD +FLDCTFG K PSK SAI+QV+NCI KHP A Sbjct: 121 TPEGVRCLPEKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVLNCIWKHPAA 180 Query: 216 PVVYLTCDLLAQDKLLVEVSRRFGSKVYVDRINNAECFQALTITAPEVLTEDESSRFQIF 37 VVYLTCDLL Q+ +L VS FGSK++VD + N E F+ALT+T PE+LT+D SSRF +F Sbjct: 181 TVVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRALTLTVPEILTQDPSSRFHMF 240 Query: 36 EGGFNKFYDRAS 1 + GF K Y+RA+ Sbjct: 241 D-GFPKLYERAA 251 >ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] gi|223530792|gb|EEF32657.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis] Length = 543 Score = 372 bits (956), Expect = e-101 Identities = 172/252 (68%), Positives = 209/252 (82%) Frame = -2 Query: 756 MPIEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 577 MPIEMP GLPFSVDTWSP+S RKRHHFLTHAHKDH SGI AH+SYPIY+TH+TK+++L Sbjct: 1 MPIEMPRGLPFSVDTWSPTSKRKRHHFLTHAHKDHCSGILAHSSYPIYATHLTKSLLLLY 60 Query: 576 YPQLDASLFVEIEIGGKVVIEDPDGTFSVSAFDANHCPGAIMFLFEGNFGNILHTGDCRL 397 +PQL+ SLFV IE+G +VI+DP G FSV+AFDANHCPGA+MFLFEG+FGNILHTGDCRL Sbjct: 61 FPQLEDSLFVGIEVGQSLVIDDPYGNFSVTAFDANHCPGAVMFLFEGSFGNILHTGDCRL 120 Query: 396 TPECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPSKESAIRQVINCIRKHPNA 217 +PEC+Q LP+KY+ + G+EP+C LD +FLDCTFG K PSK SA +QVINCI KHP A Sbjct: 121 SPECIQCLPKKYISKNGKEPRCQLDYVFLDCTFGRFHQKLPSKHSASQQVINCIWKHPAA 180 Query: 216 PVVYLTCDLLAQDKLLVEVSRRFGSKVYVDRINNAECFQALTITAPEVLTEDESSRFQIF 37 +VYLTCDLL Q++LL VSR FGSK+YV++ N ECF ALT+T P++LT+D SSRF +F Sbjct: 181 AIVYLTCDLLGQEELLANVSRTFGSKIYVEKAANPECFHALTLTVPQILTQDPSSRFHVF 240 Query: 36 EGGFNKFYDRAS 1 GF Y+RA+ Sbjct: 241 -NGFPMLYERAA 251 >ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max] Length = 553 Score = 365 bits (937), Expect = 7e-99 Identities = 175/252 (69%), Positives = 208/252 (82%), Gaps = 1/252 (0%) Frame = -2 Query: 756 MPIEMPIGLPFSVDTWSPSSDRKRHHFLTHAHKDHSSGITAHASYPIYSTHVTKTIVLQQ 577 MPIEMP GLPFSVDTW+PSS KRH FLTHAHKDHSS IT+H+SYPIYST++TKTI+LQQ Sbjct: 1 MPIEMPKGLPFSVDTWTPSSS-KRHCFLTHAHKDHSSSITSHSSYPIYSTNLTKTILLQQ 59 Query: 576 YPQLDASLFVEIEIGGKVVIEDPDGT-FSVSAFDANHCPGAIMFLFEGNFGNILHTGDCR 400 YPQLDASLF+ IE+G +VI DP F+VSAFDANHCPGA+MFLFEG FGNILHTGDCR Sbjct: 60 YPQLDASLFLNIELGQSLVIHDPAAAPFTVSAFDANHCPGAVMFLFEGKFGNILHTGDCR 119 Query: 399 LTPECLQNLPEKYVGEKGREPKCCLDDLFLDCTFGNTFIKFPSKESAIRQVINCIRKHPN 220 LTPECL NLP+KYVG KG+EP+C LD +FLDCTFGN PSK SAI+QVINCI KHP+ Sbjct: 120 LTPECLLNLPDKYVGRKGKEPRCPLDCVFLDCTFGNFSQGMPSKHSAIQQVINCIWKHPD 179 Query: 219 APVVYLTCDLLAQDKLLVEVSRRFGSKVYVDRINNAECFQALTITAPEVLTEDESSRFQI 40 A VYLTC++L Q+++LV VS FG+K+YVD+ +ECF+ L +T PE+L ED +SRF + Sbjct: 180 AQTVYLTCNMLGQEEILVNVSETFGAKIYVDKAKYSECFENLALTVPEILCEDPASRFHL 239 Query: 39 FEGGFNKFYDRA 4 F+G N Y+RA Sbjct: 240 FDGSRN-LYERA 250