BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006024
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ...   484   e-134
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]   465   e-128
ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog ...   445   e-122
ref|XP_002321102.1| predicted protein [Populus trichocarpa] gi|2...   438   e-120
ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Gl...   436   e-120

>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
            gi|296089601|emb|CBI39420.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  484 bits (1247), Expect = e-134
 Identities = 253/380 (66%), Positives = 296/380 (77%), Gaps = 4/380 (1%)
 Frame = +3

Query: 120  SAAVGSVTNLSFLTT----NDAYSTNHPLTFTTSSCLLRKTYLQQRLQCNTRVLVSGNIE 287
            S A GSVT LS L+     + + +TN   +   +   +   Y +  L+ +   + +  + 
Sbjct: 4    SGASGSVTGLSILSKLFCWDSSSNTNSSASLLINPSKISSFYRRSPLRRSPFHIATARVS 63

Query: 288  TEGQVDEQLQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIFEGRIESFNGGGLL 467
            TEG   EQ     +    P   D+ RQ+RR ADWKAARA+ ESG I+EGRIE FNGGGLL
Sbjct: 64   TEGS--EQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLL 121

Query: 468  VRFYSLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKE 647
            VRFYSL+GFLP+P LSPSHSCKEPHK+IQEI K L GSLISVKV+ A EE RKLIFSEKE
Sbjct: 122  VRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKE 181

Query: 648  AVWSKFSGKIKIGDIFSARVGTLEDYGAFVHLRFPDGYYHVTGLVHISEVSWDLVQDVRD 827
            A W KFS +I IGDIF A VG++EDYGAFVHLRFPDG YH+TGLVH+SEVSWDLVQDVRD
Sbjct: 182  AAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRD 241

Query: 828  VLNEGDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIPEDGQFGTNTSSAPDSLI 1007
            VLNEGDEVRVK++++DR KSR+TLSIKQLE+DPLLETLDKVIP+DG  G ++    DS  
Sbjct: 242  VLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSLRTSDSYD 301

Query: 1008 IEPLPGLESICKELLQENGVTDVRINRQGFEKRVVSQDLQLWLSNEQAVGNQFTLLARAG 1187
            IEPLPGLE+I +ELLQE G++DVRI+RQGFEKRVVSQDLQLWLSN  AV  QFTLLARAG
Sbjct: 302  IEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLSNAPAVDKQFTLLARAG 361

Query: 1188 RQVQEIQLTTTLDQEGVKKA 1247
            RQVQEIQLTT+LDQEG+KKA
Sbjct: 362  RQVQEIQLTTSLDQEGIKKA 381


>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
          Length = 418

 Score =  465 bits (1197), Expect = e-128
 Identities = 253/408 (62%), Positives = 296/408 (72%), Gaps = 32/408 (7%)
 Frame = +3

Query: 120  SAAVGSVTNLSFLTT----NDAYSTNHPLTFTTSSCLLRKTYLQQRLQCNTRVLVSGNIE 287
            S A GSVT LS L+     + + +TN   +   +   +   Y +  L+ +   + +  + 
Sbjct: 4    SGASGSVTGLSILSKLFCWDSSSNTNSSASLLINPSKISSFYRRSPLRRSPFHIATARVS 63

Query: 288  TEGQVDEQLQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIFEGRIESFNGGGLL 467
            TEG   EQ     +    P   D+ RQ+RR ADWKAARA+ ESG I+EGRIE FNGGGLL
Sbjct: 64   TEGS--EQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLL 121

Query: 468  VRFYSLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKE 647
            VRFYSL+GFLP+P LSPSHSCKEPHK+IQEI K L GSLISVKV+ A EE RKLIFSEKE
Sbjct: 122  VRFYSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKE 181

Query: 648  AVWSKFSGKIKIGDIFSARVGTLEDYGAFVHLRFPD----------GYYHVTGLVHISEV 797
            A W KFS +I IGDIF A VG++EDYGAFVHLRFPD          G YH+TGLVH+SEV
Sbjct: 182  AAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTGLVHVSEV 241

Query: 798  SWDLVQDVRDVLNEGDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIP------- 956
            SWDLVQDVRDVLNEGDEVRVK++++DR KSR+TLSIKQLE+DPLLETLDKVIP       
Sbjct: 242  SWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQIIFLLH 301

Query: 957  -----------EDGQFGTNTSSAPDSLIIEPLPGLESICKELLQENGVTDVRINRQGFEK 1103
                       +DG  G ++    DS  IEPLPGLE+I +ELLQE G++DVRI+RQGFEK
Sbjct: 302  RTKSSDVSHLLQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFEK 361

Query: 1104 RVVSQDLQLWLSNEQAVGNQFTLLARAGRQVQEIQLTTTLDQEGVKKA 1247
            RVVSQDLQLWLSN  AV  QFTLLARAGRQVQEIQLTT+LDQEG+KKA
Sbjct: 362  RVVSQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQLTTSLDQEGIKKA 409


>ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog [Glycine max]
          Length = 383

 Score =  445 bits (1145), Expect = e-122
 Identities = 228/376 (60%), Positives = 285/376 (75%)
 Frame = +3

Query: 120  SAAVGSVTNLSFLTTNDAYSTNHPLTFTTSSCLLRKTYLQQRLQCNTRVLVSGNIETEGQ 299
            SA++GS T++SFL+T+ + S +H   F  +  +      Q      ++VLVS +  T+  
Sbjct: 5    SASLGSFTSISFLSTSQSQSQSHLSPFKLT--VKTPWQWQHHHYLTSKVLVSASGNTQIP 62

Query: 300  VDEQLQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIFEGRIESFNGGGLLVRFY 479
              E LQ        P+  D  RQ+RR +DWKAA+ Y++S  I+ GR+E FN GGLLVRFY
Sbjct: 63   NTELLQR----PTPPDPLDDVRQARRSSDWKAAKTYQDSKLIYNGRVEGFNSGGLLVRFY 118

Query: 480  SLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKEAVWS 659
            S++GFLP+P LSP H+ KEP KSIQEI + L GS++SVKV+ A E+N+KLIFSEKEA WS
Sbjct: 119  SIMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWS 178

Query: 660  KFSGKIKIGDIFSARVGTLEDYGAFVHLRFPDGYYHVTGLVHISEVSWDLVQDVRDVLNE 839
            KFS ++ +GDIF  RVG +EDYGAFVHLRFPDG Y +TGL+H+SEVSWDL+QDVRD+L  
Sbjct: 179  KFSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYRLTGLIHVSEVSWDLIQDVRDILKV 238

Query: 840  GDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIPEDGQFGTNTSSAPDSLIIEPL 1019
            GDEVRVKV+ +D GKSR+ LSI+QLE+DPLLETLDKVIP+DG    ++ S  DS  IEPL
Sbjct: 239  GDEVRVKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEPL 298

Query: 1020 PGLESICKELLQENGVTDVRINRQGFEKRVVSQDLQLWLSNEQAVGNQFTLLARAGRQVQ 1199
            PGLE+I +ELLQE+G+ DVRI+RQGFEKRVVSQDLQLWL N      +FTLLARAGRQVQ
Sbjct: 299  PGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLCNAPPTNQRFTLLARAGRQVQ 358

Query: 1200 EIQLTTTLDQEGVKKA 1247
            EI LTT+LDQEG+KKA
Sbjct: 359  EIHLTTSLDQEGIKKA 374


>ref|XP_002321102.1| predicted protein [Populus trichocarpa] gi|222861875|gb|EEE99417.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  438 bits (1126), Expect = e-120
 Identities = 212/290 (73%), Positives = 250/290 (86%), Gaps = 1/290 (0%)
 Frame = +3

Query: 381  ADWKAARAYKESGAIFEGRIESFNGGGLLVRFYSLLGFLPYPLLSPSHSCKEPHKSIQEI 560
            ADWKA +AY + G I +GR+E FNGGGL+VRFYSL+GFLP+PLLSPSHSCK+P K+I EI
Sbjct: 1    ADWKAVKAYYDGGHILQGRVEGFNGGGLIVRFYSLVGFLPFPLLSPSHSCKDPQKTIHEI 60

Query: 561  GKDLAGSLISVKVVQASEENRKLIFSEKEAVWSKFSGKIKIGDIFSARVGTLEDYGAFVH 740
             KDL G LISVKV+ A EENRKLIFSEKEAVWSKFS  I +G+IF+ RVG++EDYGAF+H
Sbjct: 61   AKDLTGLLISVKVIHAEEENRKLIFSEKEAVWSKFSKGINVGEIFAGRVGSVEDYGAFIH 120

Query: 741  LRFPDG-YYHVTGLVHISEVSWDLVQDVRDVLNEGDEVRVKVIQLDRGKSRVTLSIKQLE 917
            +RFPDG  YH+TGLVH+SEVSWDLVQDVRD+LN GDEV VK+I +D+GKSR+TLSIKQLE
Sbjct: 121  MRFPDGSLYHLTGLVHVSEVSWDLVQDVRDILNVGDEVTVKIIDIDQGKSRITLSIKQLE 180

Query: 918  DDPLLETLDKVIPEDGQFGTNTSSAPDSLIIEPLPGLESICKELLQENGVTDVRINRQGF 1097
            +DPLLETLDKVIP+DG    +  S  +S+ IEPLPGLESI +EL +E+G+ D+RI+RQGF
Sbjct: 181  EDPLLETLDKVIPQDGSIAPDPLSMHNSITIEPLPGLESIFQELTREDGIDDIRISRQGF 240

Query: 1098 EKRVVSQDLQLWLSNEQAVGNQFTLLARAGRQVQEIQLTTTLDQEGVKKA 1247
            EKRVVSQDLQLWLSN   +  +FTLLARAGRQVQEIQLTTTLDQ G+KKA
Sbjct: 241  EKRVVSQDLQLWLSNAPPINRKFTLLARAGRQVQEIQLTTTLDQGGIKKA 290


>ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Glycine max]
          Length = 378

 Score =  436 bits (1122), Expect = e-120
 Identities = 222/376 (59%), Positives = 281/376 (74%)
 Frame = +3

Query: 120  SAAVGSVTNLSFLTTNDAYSTNHPLTFTTSSCLLRKTYLQQRLQCNTRVLVSGNIETEGQ 299
            SA +GS T++S    +   S +H   F  + C  +  Y   ++     V  SGN + +  
Sbjct: 5    SATLGSFTSIS----SSFLSQSHLSPFVKTPCQWQHHYHTAKVL----VSASGNTQIDQN 56

Query: 300  VDEQLQGVGIGEDAPETTDSSRQSRRYADWKAARAYKESGAIFEGRIESFNGGGLLVRFY 479
             D    G+      P+  D +RQ+RR +DWKAA+ Y++S  I+ GR+E FN GGLLVRFY
Sbjct: 57   PDS---GLLQRPTPPDPLDDARQARRSSDWKAAKTYQDSKVIYNGRVEGFNSGGLLVRFY 113

Query: 480  SLLGFLPYPLLSPSHSCKEPHKSIQEIGKDLAGSLISVKVVQASEENRKLIFSEKEAVWS 659
            S++GFLP+P LSP H+ KEP KSIQEI + L GS++SVKV+ A E+N+KLIFSEKEA WS
Sbjct: 114  SVMGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWS 173

Query: 660  KFSGKIKIGDIFSARVGTLEDYGAFVHLRFPDGYYHVTGLVHISEVSWDLVQDVRDVLNE 839
            K+S ++ +GDIF  RVG +EDYGAFVHLRFPDG YH+TGL+H+SEVSWDL+QDVRD+L  
Sbjct: 174  KYSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYHLTGLIHVSEVSWDLIQDVRDILKV 233

Query: 840  GDEVRVKVIQLDRGKSRVTLSIKQLEDDPLLETLDKVIPEDGQFGTNTSSAPDSLIIEPL 1019
            GDEVR KV+ +D GKSR+ LSI+QLE+DPLLETLDKVIP+DG    ++ S  DS  IEPL
Sbjct: 234  GDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSMSGGDSGSIEPL 293

Query: 1020 PGLESICKELLQENGVTDVRINRQGFEKRVVSQDLQLWLSNEQAVGNQFTLLARAGRQVQ 1199
            PGLE+I +ELLQE+G+ DVRI+RQGFEKRVVSQDLQLWLSN      +FTLLARAGRQVQ
Sbjct: 294  PGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQ 353

Query: 1200 EIQLTTTLDQEGVKKA 1247
            EI LTT+LDQEG+++A
Sbjct: 354  EIHLTTSLDQEGIRRA 369