BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006023
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510479.1| conserved hypothetical protein [Ricinus comm...   108   3e-22
ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinif...   107   1e-21
ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sat...   104   6e-21
ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
emb|CBI19797.3| unnamed protein product [Vitis vinifera]               93   3e-17

>ref|XP_002510479.1| conserved hypothetical protein [Ricinus communis]
           gi|223551180|gb|EEF52666.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  108 bits (271), Expect = 3e-22
 Identities = 66/120 (55%), Positives = 79/120 (65%), Gaps = 25/120 (20%)
 Frame = +3

Query: 216 MGKK-KFIDKKKSATFQLLARDSADPKYDQGGPSADRVFTRVDNNYSYS--------NPD 368
           MGKK KFIDKK+SATFQLLARDS+DP Y++  P  DRVF RVDNN  YS        NPD
Sbjct: 1   MGKKNKFIDKKRSATFQLLARDSSDPNYNE-TPGGDRVFVRVDNNNQYSVDTFFHEDNPD 59

Query: 369 EEDPDSIFADA----DDEDNKKPVRVSSSTR------------LPDNIRKEILELGFPDD 500
            EDP+SIFA+A    DD+D+     + SS +            LP+++RKEILELGFPDD
Sbjct: 60  GEDPNSIFANAPDDFDDDDDHNVRFLGSSMKFGGGASSADAAPLPEHVRKEILELGFPDD 119


>ref|XP_002280700.1| PREDICTED: protein LTV1 homolog [Vitis vinifera]
          Length = 576

 Score =  107 bits (267), Expect = 1e-21
 Identities = 68/124 (54%), Positives = 79/124 (63%), Gaps = 29/124 (23%)
 Frame = +3

Query: 216 MGKKKFIDKKKSATFQLLARDSADPKYDQGGPSADRVFTRVDNN-YS----------YSN 362
           MGKKKFIDKKKSATFQLLARDS+DP Y Q  P  DRVF RVDNN YS           S 
Sbjct: 1   MGKKKFIDKKKSATFQLLARDSSDPNY-QDSPGHDRVFIRVDNNPYSVDGIFHESDDLSG 59

Query: 363 PDE--EDPDSIFADADDEDN--KKPVRV--------------SSSTRLPDNIRKEILELG 488
           P    +DPDSIFADA D+DN  ++  RV              +++  LPD++R+EILELG
Sbjct: 60  PSHYADDPDSIFADAPDDDNDGEEDDRVFGKQSSSQLSIGATAAAVPLPDHVRREILELG 119

Query: 489 FPDD 500
           FPDD
Sbjct: 120 FPDD 123


>ref|XP_004146107.1| PREDICTED: protein LTV1 homolog [Cucumis sativus]
           gi|449512941|ref|XP_004164184.1| PREDICTED: protein LTV1
           homolog [Cucumis sativus]
          Length = 540

 Score =  104 bits (260), Expect = 6e-21
 Identities = 64/120 (53%), Positives = 78/120 (65%), Gaps = 25/120 (20%)
 Frame = +3

Query: 216 MGKKKFIDKKKSATFQLLARDSADPKYDQGGPSADRVFTRVDNNYSYSNPD--------- 368
           MGKKKF DKKKSATFQLLARDS+DP YD G  + DRVF RVD N+SY+ P          
Sbjct: 1   MGKKKFFDKKKSATFQLLARDSSDPNYD-GTAATDRVFVRVD-NHSYTLPAFDDGPVDAS 58

Query: 369 -----EEDPDSIFADA----DDEDN-------KKPVRVSSSTRLPDNIRKEILELGFPDD 500
                +EDP+SIFADA    D+E+N       +    V  ++ LP+N+RK+ILELGFPDD
Sbjct: 59  GSACYDEDPNSIFADASEDYDEEENGGFGSSMQFSGDVGGTSSLPENVRKDILELGFPDD 118


>ref|XP_002306905.1| predicted protein [Populus trichocarpa] gi|222856354|gb|EEE93901.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 60/121 (49%), Positives = 73/121 (60%), Gaps = 26/121 (21%)
 Frame = +3

Query: 216 MGKKKFIDKKKSATFQLLARDSADPKYDQGGPSADRVFTRVDNN------------YSYS 359
           MGKKKFIDKKK+ATFQL ARDS+DP +D      DRVF RVDNN             S +
Sbjct: 1   MGKKKFIDKKKAATFQLFARDSSDPNFD----GTDRVFVRVDNNPYTVESLLPGNKISSN 56

Query: 360 NPDEEDPDSIFADADDE------------DNKKPV--RVSSSTRLPDNIRKEILELGFPD 497
           +  ++DP+SIFADA D+            DN   V    SSS   P+++R+EILELGFPD
Sbjct: 57  SHFDDDPNSIFADAPDDMEDGGNGSFGNSDNFGGVFFGESSSEPFPEDVRREILELGFPD 116

Query: 498 D 500
           D
Sbjct: 117 D 117


>emb|CBI19797.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 54/95 (56%), Positives = 62/95 (65%)
 Frame = +3

Query: 216 MGKKKFIDKKKSATFQLLARDSADPKYDQGGPSADRVFTRVDNNYSYSNPDEEDPDSIFA 395
           MGKKKFIDKKKSATFQLLARDS+DP Y Q  P  DRVF RVDNN          P S+  
Sbjct: 1   MGKKKFIDKKKSATFQLLARDSSDPNY-QDSPGHDRVFIRVDNN----------PYSV-- 47

Query: 396 DADDEDNKKPVRVSSSTRLPDNIRKEILELGFPDD 500
           DA           +++  LPD++R+EILELGFPDD
Sbjct: 48  DAITSSQLSIGATAAAVPLPDHVRREILELGFPDD 82