BLASTX nr result

ID: Coptis25_contig00006021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006021
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276039.1| PREDICTED: RING finger and CHY zinc finger d...   520   e-145
ref|NP_001241502.1| uncharacterized protein LOC100792038 [Glycin...   508   e-141
ref|XP_002312758.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
ref|XP_003593984.1| RING finger and CHY zinc finger domain-conta...   504   e-140
gb|AFK47591.1| unknown [Medicago truncatula]                          502   e-140

>ref|XP_002276039.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1 [Vitis vinifera] gi|297736904|emb|CBI26105.3| unnamed
            protein product [Vitis vinifera]
          Length = 267

 Score =  520 bits (1340), Expect = e-145
 Identities = 219/266 (82%), Positives = 246/266 (92%)
 Frame = +3

Query: 216  MEVSANERLDFGKMGYGCVHYRRRCKIRAPCCNEVYPCRHCHNEATNTFKNVMDRHELVR 395
            ME SA+ERLDFGKMG+GC HYRRRC+IRAPCCNE++PCRHCHNEAT+  +N  DRHELVR
Sbjct: 1    MEGSADERLDFGKMGFGCKHYRRRCRIRAPCCNEIFPCRHCHNEATSMLRNPFDRHELVR 60

Query: 396  HDVKQVICSVCDTEQPVAQVCTNCGISMGEYFCETCKFYDDSTEKGQFHCDDCGICRVGG 575
            HDVKQVIC+VCDTEQPVAQVCTNCG++MGEYFCE CKFYDD T KGQFHCDDCGICRVGG
Sbjct: 61   HDVKQVICAVCDTEQPVAQVCTNCGVNMGEYFCEVCKFYDDDTTKGQFHCDDCGICRVGG 120

Query: 576  RENFFHCQRCGSCYSVGLRDNHLCVENSMRHHCPICYEYLFDSLKETTVLKCGHTMHLDC 755
            R+ FFHC++CG CYSVGLRDNH CVENSMRHHCPICYEYLFDSLK+TTV+ CGHTMH +C
Sbjct: 121  RDKFFHCKKCGCCYSVGLRDNHSCVENSMRHHCPICYEYLFDSLKDTTVMVCGHTMHCEC 180

Query: 756  LDEMKNHDQYCCPICSKSVFDMSKAWKRIDEEVQATIMPEDYQNKKVWILCNDCNDTTEV 935
             +EM +HD+YCCPICSKSV DM++ WKRIDEE++ATIMPEDYQ+KKVWILCNDCNDTTEV
Sbjct: 181  YNEMVSHDKYCCPICSKSVRDMTRTWKRIDEEIEATIMPEDYQHKKVWILCNDCNDTTEV 240

Query: 936  FFHIIGHKCDHCKSYNTRLIAPPVLP 1013
            F+HIIG KC HCKSYNTR++APPVLP
Sbjct: 241  FYHIIGQKCSHCKSYNTRIVAPPVLP 266


>ref|NP_001241502.1| uncharacterized protein LOC100792038 [Glycine max]
            gi|255646865|gb|ACU23903.1| unknown [Glycine max]
          Length = 267

 Score =  508 bits (1307), Expect = e-141
 Identities = 213/266 (80%), Positives = 239/266 (89%)
 Frame = +3

Query: 216  MEVSANERLDFGKMGYGCVHYRRRCKIRAPCCNEVYPCRHCHNEATNTFKNVMDRHELVR 395
            ME S NERLDFGKMGYGC HYRRRC+IRAPCCNE+Y CRHCHN+A +  KN  DRHELVR
Sbjct: 1    MEGSVNERLDFGKMGYGCNHYRRRCRIRAPCCNEIYSCRHCHNDAASLLKNPFDRHELVR 60

Query: 396  HDVKQVICSVCDTEQPVAQVCTNCGISMGEYFCETCKFYDDSTEKGQFHCDDCGICRVGG 575
             DVKQV+CSVCDTEQPVAQVCTNCG+ MGEYFC  CKF+DD  EK QFHCDDCGICRVGG
Sbjct: 61   QDVKQVVCSVCDTEQPVAQVCTNCGVKMGEYFCNICKFFDDDVEKEQFHCDDCGICRVGG 120

Query: 576  RENFFHCQRCGSCYSVGLRDNHLCVENSMRHHCPICYEYLFDSLKETTVLKCGHTMHLDC 755
            R+NFFHC++CGSCY++GLRDNHLCVENSMRHHCPICYEYLFDSLK+T V+KCGHTMH +C
Sbjct: 121  RDNFFHCKKCGSCYAIGLRDNHLCVENSMRHHCPICYEYLFDSLKDTIVMKCGHTMHHEC 180

Query: 756  LDEMKNHDQYCCPICSKSVFDMSKAWKRIDEEVQATIMPEDYQNKKVWILCNDCNDTTEV 935
              EM  +D+YCCPICSKSV DMSK WKRIDEE++AT+MPEDY+N+KVWILCNDCNDTTEV
Sbjct: 181  YVEMIKNDKYCCPICSKSVIDMSKTWKRIDEEIEATVMPEDYRNRKVWILCNDCNDTTEV 240

Query: 936  FFHIIGHKCDHCKSYNTRLIAPPVLP 1013
            +FHI+G KC HC+SYNTR +APPVLP
Sbjct: 241  YFHILGQKCGHCRSYNTRAVAPPVLP 266


>ref|XP_002312758.1| predicted protein [Populus trichocarpa] gi|222852578|gb|EEE90125.1|
            predicted protein [Populus trichocarpa]
          Length = 269

 Score =  506 bits (1302), Expect = e-141
 Identities = 213/262 (81%), Positives = 237/262 (90%)
 Frame = +3

Query: 228  ANERLDFGKMGYGCVHYRRRCKIRAPCCNEVYPCRHCHNEATNTFKNVMDRHELVRHDVK 407
            +NERLDFGKMGYGC HYRRRC+IRAPCCNE++ CRHCHNEATN  KN  DRHEL R+DVK
Sbjct: 7    SNERLDFGKMGYGCQHYRRRCQIRAPCCNEIFTCRHCHNEATNMLKNFCDRHELNRYDVK 66

Query: 408  QVICSVCDTEQPVAQVCTNCGISMGEYFCETCKFYDDSTEKGQFHCDDCGICRVGGRENF 587
            QVIC+VCDTEQPVAQVCTNCG++MGEYFCE CKF+DD T KGQFHCDDCGICRVGGREN+
Sbjct: 67   QVICAVCDTEQPVAQVCTNCGVNMGEYFCEICKFFDDDTAKGQFHCDDCGICRVGGRENY 126

Query: 588  FHCQRCGSCYSVGLRDNHLCVENSMRHHCPICYEYLFDSLKETTVLKCGHTMHLDCLDEM 767
            FHC++CGSCY+  L DNH CVENSMRHHCPICYEYLFDSLKETTV+KCGHTMH +C DEM
Sbjct: 127  FHCKKCGSCYATSLLDNHSCVENSMRHHCPICYEYLFDSLKETTVMKCGHTMHGECYDEM 186

Query: 768  KNHDQYCCPICSKSVFDMSKAWKRIDEEVQATIMPEDYQNKKVWILCNDCNDTTEVFFHI 947
               D+YCCPICSKS+ DMSK W+RIDEE++AT+MPEDY ++KVWILCNDCNDTTEV+FHI
Sbjct: 187  IKRDKYCCPICSKSIIDMSKTWERIDEEIEATVMPEDYSHRKVWILCNDCNDTTEVYFHI 246

Query: 948  IGHKCDHCKSYNTRLIAPPVLP 1013
            IG KC HCKSYNTR IAPPVLP
Sbjct: 247  IGQKCSHCKSYNTRTIAPPVLP 268


>ref|XP_003593984.1| RING finger and CHY zinc finger domain-containing protein [Medicago
            truncatula] gi|355483032|gb|AES64235.1| RING finger and
            CHY zinc finger domain-containing protein [Medicago
            truncatula]
          Length = 267

 Score =  504 bits (1299), Expect = e-140
 Identities = 215/266 (80%), Positives = 238/266 (89%)
 Frame = +3

Query: 216  MEVSANERLDFGKMGYGCVHYRRRCKIRAPCCNEVYPCRHCHNEATNTFKNVMDRHELVR 395
            ME SA ERLDFGKMGYGC HYRRRC+IRAPCCNEVY CRHCHNEAT+  KN  D HELVR
Sbjct: 1    MEASAIERLDFGKMGYGCKHYRRRCRIRAPCCNEVYSCRHCHNEATSMLKNPFDHHELVR 60

Query: 396  HDVKQVICSVCDTEQPVAQVCTNCGISMGEYFCETCKFYDDSTEKGQFHCDDCGICRVGG 575
            +DV+QV+CSVCDTEQPVAQVCTNCG+ MGEY+C+ CKF+DD T K QFHC+DCGICRVGG
Sbjct: 61   NDVEQVVCSVCDTEQPVAQVCTNCGVRMGEYYCDLCKFFDDDTGKQQFHCEDCGICRVGG 120

Query: 576  RENFFHCQRCGSCYSVGLRDNHLCVENSMRHHCPICYEYLFDSLKETTVLKCGHTMHLDC 755
             EN+FHC++CGSCYSV LRDNHLCVENSMRHHCPICYEYLFDSLK+TTV+KCGHTMH +C
Sbjct: 121  SENYFHCKKCGSCYSVALRDNHLCVENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHCEC 180

Query: 756  LDEMKNHDQYCCPICSKSVFDMSKAWKRIDEEVQATIMPEDYQNKKVWILCNDCNDTTEV 935
              EM   D+YCCPICSKSV DMS AWKRIDEE++AT+MP+DY+N+KVWILCNDCNDTTEV
Sbjct: 181  YHEMIKRDKYCCPICSKSVIDMSTAWKRIDEEIEATVMPDDYRNRKVWILCNDCNDTTEV 240

Query: 936  FFHIIGHKCDHCKSYNTRLIAPPVLP 1013
             FHIIGHKC HC SYNTR IAPPVLP
Sbjct: 241  SFHIIGHKCGHCSSYNTRAIAPPVLP 266


>gb|AFK47591.1| unknown [Medicago truncatula]
          Length = 267

 Score =  502 bits (1293), Expect = e-140
 Identities = 214/266 (80%), Positives = 237/266 (89%)
 Frame = +3

Query: 216  MEVSANERLDFGKMGYGCVHYRRRCKIRAPCCNEVYPCRHCHNEATNTFKNVMDRHELVR 395
            ME SA ERLDFGKMGYGC HYRRRC+IRAPCCNEVY CRHCHNEAT+  KN  D HELVR
Sbjct: 1    MEASAIERLDFGKMGYGCKHYRRRCRIRAPCCNEVYSCRHCHNEATSMLKNPFDHHELVR 60

Query: 396  HDVKQVICSVCDTEQPVAQVCTNCGISMGEYFCETCKFYDDSTEKGQFHCDDCGICRVGG 575
            +DV+QV+CSVCDTEQPVAQVCTNCG+ MGEY+C+ CKF+DD T K QFHC+DCGICRVGG
Sbjct: 61   NDVEQVVCSVCDTEQPVAQVCTNCGVRMGEYYCDLCKFFDDDTGKQQFHCEDCGICRVGG 120

Query: 576  RENFFHCQRCGSCYSVGLRDNHLCVENSMRHHCPICYEYLFDSLKETTVLKCGHTMHLDC 755
             EN+FHC++CGSCYSV LRDNHLCVENSMRHHCPICYEYLFDSLK+TTV+KCGHTMH +C
Sbjct: 121  SENYFHCKKCGSCYSVALRDNHLCVENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHCEC 180

Query: 756  LDEMKNHDQYCCPICSKSVFDMSKAWKRIDEEVQATIMPEDYQNKKVWILCNDCNDTTEV 935
              EM   D+YCCPICS SV DMS AWKRIDEE++AT+MP+DY+N+KVWILCNDCNDTTEV
Sbjct: 181  YHEMIKRDKYCCPICSMSVIDMSTAWKRIDEEIEATVMPDDYRNRKVWILCNDCNDTTEV 240

Query: 936  FFHIIGHKCDHCKSYNTRLIAPPVLP 1013
             FHIIGHKC HC SYNTR IAPPVLP
Sbjct: 241  SFHIIGHKCGHCSSYNTRAIAPPVLP 266


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