BLASTX nr result
ID: Coptis25_contig00006018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006018
(1685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin... 290 6e-76
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263... 281 3e-73
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera] 281 4e-73
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu... 270 9e-70
ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2... 245 3e-62
>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
Length = 362
Score = 290 bits (743), Expect = 6e-76
Identities = 185/368 (50%), Positives = 207/368 (56%), Gaps = 13/368 (3%)
Frame = +1
Query: 220 SEAGIMSGRES-SYGIQKHQPVST--GTPNMRLGFSSDGTAVYKPILTTATTSPTYQQPI 390
SE GIMSGRES + G+QK PV + +MRL F+ DGTA+YKPI T++ P YQ
Sbjct: 5 SEPGIMSGRESFNVGMQK-SPVQSQPSMQSMRLAFAPDGTAIYKPITTSSPPPPPYQGGG 63
Query: 391 TA------ENAVATTVIPQGISTSINIGEQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXX 552
A + + P G++ IN+GE + DGTM
Sbjct: 64 GAGSTGGGDGPSPAAITPHGLN--INVGEPVKRKRGRPRKYGPDGTMSLALTTVSPTAAV 121
Query: 553 XXXXXXXXQQNVQPSGGFXXXXXXXXXXXXMKKSRGRPPGSGKKQQIAALGSAGIGFTPH 732
PS MKK+RGRPPGSGKKQQ+AALGSAGIGFTPH
Sbjct: 122 SPGSG-----GFSPSSAGAGNPASSASAEAMKKARGRPPGSGKKQQLAALGSAGIGFTPH 176
Query: 733 VITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXXX 912
VITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEI
Sbjct: 177 VITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEILSL 236
Query: 913 XXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIADGRKDL 1092
QRSRTGGLSVS SPVQVVVGSFIADG+K+
Sbjct: 237 SGSFLLSESGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGKKE- 295
Query: 1093 KPNH---SEPAAAPAKLXXXXXXXXXXXXXXRGTLSE-XXXXXXXXLNHSTGACNNSNAQ 1260
P H S+P AP KL RGTLSE LN STG CNNSN Q
Sbjct: 296 -PKHTAPSDPTLAPGKLAAGGAAAGANSPPSRGTLSESSGGGPGSPLNQSTGTCNNSNQQ 354
Query: 1261 GMANVPWK 1284
G++N+PWK
Sbjct: 355 GLSNMPWK 362
>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
gi|297745600|emb|CBI40765.3| unnamed protein product
[Vitis vinifera]
Length = 353
Score = 281 bits (720), Expect = 3e-73
Identities = 181/369 (49%), Positives = 205/369 (55%), Gaps = 11/369 (2%)
Frame = +1
Query: 211 MSGSEAGIMSGRES-SYGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 384
MSGSE GIM+ RE S G+QK+ P NMRL FS DG AVYKP+ + TSP YQ
Sbjct: 1 MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQS 57
Query: 385 P--ITAENAVATTVIPQGISTSINIGEQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXXXX 558
+ + +IP G++ ++ E + DGTM
Sbjct: 58 SGGTGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV---- 112
Query: 559 XXXXXXQQNVQPSGGFXXXXXXXXXXXX---MKKSRGRPPGSGKKQQIAALGSAGIGFTP 729
NV SGG +KK+RGRPPGS KKQQ+ ALGSAG+GFTP
Sbjct: 113 --------NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTP 164
Query: 730 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXX 909
HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI
Sbjct: 165 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILS 224
Query: 910 XXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIADGRKD 1089
QRSRTGGLSVS SPVQVVVGSFIADGRK+
Sbjct: 225 LSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKE 284
Query: 1090 LK-PNHSEPAAAPAKL---XXXXXXXXXXXXXXRGTLSEXXXXXXXXLNHSTGACNNSNA 1257
K + EP++AP K+ RGTLSE LN STGACNNSN
Sbjct: 285 SKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNP 344
Query: 1258 QGMANVPWK 1284
GM ++PWK
Sbjct: 345 PGMTSIPWK 353
>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
Length = 390
Score = 281 bits (719), Expect = 4e-73
Identities = 186/394 (47%), Positives = 213/394 (54%), Gaps = 12/394 (3%)
Frame = +1
Query: 211 MSGSEAGIMSGRES-SYGIQKHQ-PVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQ 384
MSGSE GIM+ RE S G+QK+ P NMRL FS DG AVYKP+ + TSP YQ
Sbjct: 1 MSGSETGIMTTREPFSMGLQKNAVPSQPVIQNMRLAFSPDGAAVYKPV---SGTSPPYQS 57
Query: 385 P--ITAENAVATTVIPQGISTSINIGEQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXXXX 558
+ + +IP G++ ++ E + DGTM
Sbjct: 58 SGGTGGDGSTGGAIIPHGLNMNMG-SEPLKRKRGRPRKYGPDGTMALALSPAPSGV---- 112
Query: 559 XXXXXXQQNVQPSGGFXXXXXXXXXXXX---MKKSRGRPPGSGKKQQIAALGSAGIGFTP 729
NV SGG +KK+RGRPPGS KKQQ+ ALGSAG+GFTP
Sbjct: 113 --------NVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQMEALGSAGVGFTP 164
Query: 730 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQAATSGGTVTYEGRFEIXX 909
HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQ ATSGGTVTYEGRFEI
Sbjct: 165 HVITVKAGEDVSSKIMSFSQHGPRAVCILSANGAISNVTLRQPATSGGTVTYEGRFEILS 224
Query: 910 XXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXXXXXXXXXXXSPVQVVVGSFIADGRKD 1089
QRSRTGGLSVS SPVQVVVGSFIADGRK+
Sbjct: 225 LSGSFLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFIADGRKE 284
Query: 1090 LK-PNHSEPAAAPAKL---XXXXXXXXXXXXXXRGTLSEXXXXXXXXLNHSTGACNNSNA 1257
K + EP++AP K+ RGTLSE LN STGACNNSN
Sbjct: 285 SKSASQVEPSSAPPKIAPVGGGGGVTGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNP 344
Query: 1258 QGMANVPWK*PS*FLTTSTPICVVG-LGLMNSFI 1356
GM ++PW P V G LG ++ F+
Sbjct: 345 PGMTSIPWNLTLLLAVKFQPSSVTGDLGRVSRFV 378
>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
gi|223551427|gb|EEF52913.1| DNA binding protein, putative
[Ricinus communis]
Length = 374
Score = 270 bits (690), Expect = 9e-70
Identities = 177/392 (45%), Positives = 204/392 (52%), Gaps = 34/392 (8%)
Frame = +1
Query: 211 MSGSEAGIM-SGRESSYGIQKHQPVSTGTPNMRLGFSSDGTAVYKPILTTATTSPTYQQP 387
MSGSE G+M S +G+ QPV NMRL F +DG++VYKP +TTAT SP+YQ
Sbjct: 1 MSGSETGVMTSTTREPFGVVSPQPV---IQNMRLAFGADGSSVYKP-MTTATNSPSYQP- 55
Query: 388 ITAENAVATTVIPQGISTSINIG-----EQMXXXXXXXXXXXXDGTMXXXXXXXXXXXXX 552
+ +A + +G S IN+ + M DGTM
Sbjct: 56 --SPSAASPGGFVEGGSLGINVNMGSGNDAMKRKRGRPRKYGPDGTMALALVSAPQSVGI 113
Query: 553 XXXXXXXXQQNVQPSGGFXXXXXXXXXXXXM---------------------------KK 651
QP+GG + KK
Sbjct: 114 -----------TQPAGGGGFSTPTSAAATSVGPSTTTIAANPSLPSGSGGGSVSPTGIKK 162
Query: 652 SRGRPPGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSANGA 831
RGRPPGS KKQQ+ ALGSAG GFTPH+ITVKAGEDVSSKIMSFSQHGPRAVCILSANGA
Sbjct: 163 GRGRPPGSNKKQQLEALGSAGFGFTPHIITVKAGEDVSSKIMSFSQHGPRAVCILSANGA 222
Query: 832 ISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXXXXX 1011
ISNVTLRQ ATSGG+VTYEGRFEI QRSRTGGLSVS
Sbjct: 223 ISNVTLRQPATSGGSVTYEGRFEILSLSGSFLPSENGGQRSRTGGLSVSLSGPDGRVLGG 282
Query: 1012 XXXXXXXXXSPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXXRGTL 1188
SPVQVVV SFI+D RK+LK PNH EP +A +L RGT
Sbjct: 283 GVAGLLLAASPVQVVVASFISDDRKELKSPNHLEPLSAMNRLTPVMGTTGPSSPPSRGTF 342
Query: 1189 SEXXXXXXXXLNHSTGACNNSNAQGMANVPWK 1284
SE LN STGACNNSN QG++++PWK
Sbjct: 343 SESSGGPGSPLNQSTGACNNSNLQGISSMPWK 374
>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
predicted protein [Populus trichocarpa]
Length = 272
Score = 245 bits (625), Expect = 3e-62
Identities = 131/215 (60%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Frame = +1
Query: 643 MKKSRGRPPGSGKKQQIAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQHGPRAVCILSA 822
+KK+RGRPPGS KKQQ+ ALGSAG GFTPHVITVKAGED+SSK+MSFSQHGPRAVCILSA
Sbjct: 58 VKKARGRPPGSSKKQQLNALGSAGFGFTPHVITVKAGEDISSKVMSFSQHGPRAVCILSA 117
Query: 823 NGAISNVTLRQAATSGGTVTYEGRFEIXXXXXXXXXXXXXXQRSRTGGLSVSXXXXXXXX 1002
NGAISNVTLRQ ATSGGTVTYEGRFEI QRSR+GGLSV
Sbjct: 118 NGAISNVTLRQQATSGGTVTYEGRFEILALSGSYLPSENGGQRSRSGGLSVCLSGPDGRV 177
Query: 1003 XXXXXXXXXXXXSPVQVVVGSFIADGRKDLK-PNHSEPAAAPAKLXXXXXXXXXXXXXXR 1179
+PVQVVVGSFIADGRK+ K NH+EP++A ++L R
Sbjct: 178 LGGTVAGLLVAAAPVQVVVGSFIADGRKESKTANHTEPSSATSRLPPRGGSTGVSSPPSR 237
Query: 1180 GTLSEXXXXXXXXLNHSTGACNNSNAQGMANVPWK 1284
GTLSE LN STGACNNSN QGM+++PW+
Sbjct: 238 GTLSESSGGPGSPLNQSTGACNNSNPQGMSSMPWE 272