BLASTX nr result

ID: Coptis25_contig00006012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006012
         (2966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]           530   e-148
ref|XP_004147087.1| PREDICTED: protein ELC-like [Cucumis sativus...   504   e-140
ref|XP_002525563.1| protein with unknown function [Ricinus commu...   502   e-139
ref|XP_003607267.1| Protein ELC [Medicago truncatula] gi|3555083...   492   e-136
gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides]      491   e-136

>ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]
          Length = 425

 Score =  530 bits (1365), Expect = e-148
 Identities = 272/417 (65%), Positives = 316/417 (75%), Gaps = 8/417 (1%)
 Frame = +3

Query: 54   SPPPNPQFTSQFLSNVLCQRGPSSLPYTEDAKWLIRQHLVSLTETHPSLQPKTATYNHND 233
            SP PNPQ T Q+LS+VL QRGPS+LPY ED KWLIRQHL+SL+E +PSLQPKTATY HND
Sbjct: 15   SPSPNPQLTQQWLSSVLSQRGPSALPYAEDVKWLIRQHLLSLSENYPSLQPKTATYTHND 74

Query: 234  GTTVNLLQVDGTIPMVYQSVTYNIPIIIWLMETYPRSSPCVYVAPTRDMIIKRPHPHVNP 413
            G TVNLLQ DGT+PM+Y  VTYNIPIIIWLME+YPR  PCVYV PTRDM+IKRPH HVNP
Sbjct: 75   GRTVNLLQSDGTVPMLYLDVTYNIPIIIWLMESYPRHPPCVYVNPTRDMVIKRPHSHVNP 134

Query: 414  SGIVSIPYLHNWVYPSSNLVDMVRNLSHLFGREPPLYTRQSQSQSRPNDNSLATTN---S 584
            SG+VSIPYLH+WVYPSSNLVD+ RNLSH+F R+PPLY     SQ RPN N     N   +
Sbjct: 135  SGMVSIPYLHSWVYPSSNLVDLARNLSHVFSRDPPLY-----SQRRPNPNPNPNPNPNPN 189

Query: 585  SGLEVGVSNLGNSRPT---SIPPRAYXXXXXXXXXXXXXXXXXXQRQ-NTDDPNEVYRKN 752
            +      + +  + PT    IPPRAY                    Q +T+DPNEV+R+N
Sbjct: 190  ANYNFTPNPMMGAAPTVRPVIPPRAYPPSPYGSGSGTGGGRIPPSPQRHTEDPNEVFRRN 249

Query: 753  AINKLVDSLHGDITTLRKNREVEMEGLISAQTVLRQREEVLAKGLREMVGEKEGLEQQLQ 932
            A+NKLV+SLH D+  LRK  E EMEG+  AQ VLRQREE L++G++E+  EKEGLEQQLQ
Sbjct: 250  AVNKLVESLHADVGVLRKTSEAEMEGMFGAQGVLRQREEQLSRGVKELQDEKEGLEQQLQ 309

Query: 933  MVLMNTDILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSL 1112
            MVLMN D+LE WLR+NE K+G   GN+D D AF PCDALSKQML+ T+SDL+IED IY+L
Sbjct: 310  MVLMNADVLEAWLRENEVKLG-NMGNLDVDNAFEPCDALSKQMLDCTSSDLSIEDTIYAL 368

Query: 1113 DKAAQEGSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQTQVVSMAAR-APQYAM 1280
            DKA QEGSI  DQYLKN+R LSREQFFHRA  AK+RAAQMQ QV SMAAR + QYAM
Sbjct: 369  DKAVQEGSISFDQYLKNVRLLSREQFFHRAMCAKLRAAQMQAQVASMAARVSSQYAM 425


>ref|XP_004147087.1| PREDICTED: protein ELC-like [Cucumis sativus]
            gi|449503309|ref|XP_004161938.1| PREDICTED: protein
            ELC-like [Cucumis sativus]
          Length = 422

 Score =  504 bits (1297), Expect = e-140
 Identities = 260/416 (62%), Positives = 315/416 (75%), Gaps = 10/416 (2%)
 Frame = +3

Query: 60   PPNPQFTSQFLSNVLCQRGPSSLPYTEDAKWLIRQHLVSLTETHPSLQPKTATYNHNDGT 239
            PPNPQ   QFLS+VL QRGPS+LPYTED KWLIRQHLV+LT   PSL P+TA++ HNDG 
Sbjct: 12   PPNPQIIQQFLSSVLSQRGPSALPYTEDTKWLIRQHLVALTTAFPSLVPRTASFTHNDGR 71

Query: 240  TVNLLQVDGTIPMVYQSVTYNIPIIIWLMETYPRSSPCVYVAPTRDMIIKRPHPHVNPSG 419
            +VNLLQ DGT+PM +Q  TYNIP++IWLME+YPR  PCVYV PTRDMIIKRPHPHVNPSG
Sbjct: 72   SVNLLQSDGTVPMSFQGATYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSG 131

Query: 420  IVSIPYLHNWVYPSSNLVDMVRNLSHLFGREPPLYTRQSQSQS-------RPNDNSLATT 578
            +VSIPYL NW+YPSSNLV++VRNLS +FGR+PPLY+++  + S        P+ +S    
Sbjct: 132  MVSIPYLQNWIYPSSNLVELVRNLSVMFGRDPPLYSQRRPNPSPSPSPSPSPSPSSSFGR 191

Query: 579  NSSGLEVGVSNLGNS---RPTSIPPRAYXXXXXXXXXXXXXXXXXXQRQNTDDPNEVYRK 749
            NS    +  SN+G +   RP +IPPRAY                   + +T+DPNEV+++
Sbjct: 192  NSVNSSI-ASNMGVAAFPRP-AIPPRAY--PPSPYGSGNDIASIARMQPHTEDPNEVFKR 247

Query: 750  NAINKLVDSLHGDITTLRKNREVEMEGLISAQTVLRQREEVLAKGLREMVGEKEGLEQQL 929
            NAINKLV+ +H DI  LRK RE EMEGL SAQ VL+QREE L KGL+EM  EKE LEQQL
Sbjct: 248  NAINKLVEMVHNDIVGLRKTREAEMEGLFSAQGVLKQREEDLNKGLKEMQDEKEALEQQL 307

Query: 930  QMVLMNTDILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYS 1109
            QMVLMNTD+LE WLR+NEGK+   + + +  +AF   D LSKQ+LE TASDLAIEDAIYS
Sbjct: 308  QMVLMNTDVLEAWLRENEGKI---SSDFNAHDAFECVDVLSKQVLECTASDLAIEDAIYS 364

Query: 1110 LDKAAQEGSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQTQVVSMAARAPQYA 1277
            LDKA Q+G+I  DQYL+N+R LSREQFFHRATAAKVRA+Q+Q QV +MA+R  QY+
Sbjct: 365  LDKAVQDGAIQFDQYLRNVRLLSREQFFHRATAAKVRASQLQAQVANMASRISQYS 420


>ref|XP_002525563.1| protein with unknown function [Ricinus communis]
            gi|223535142|gb|EEF36822.1| protein with unknown function
            [Ricinus communis]
          Length = 419

 Score =  502 bits (1292), Expect = e-139
 Identities = 265/421 (62%), Positives = 309/421 (73%), Gaps = 16/421 (3%)
 Frame = +3

Query: 63   PNPQFTSQFLSNVLCQRGPSSLPYTEDAKWLIRQHLVSLTETHPSLQPKTATYNHNDGTT 242
            PN Q T QFLS+VL QRGPSSLPY ED KWLIRQHL+SL  T+PSL+PKTAT+ HNDG +
Sbjct: 12   PNHQATQQFLSSVLSQRGPSSLPYIEDTKWLIRQHLLSLITTYPSLEPKTATFTHNDGRS 71

Query: 243  VNLLQVDGTIPMVYQSVTYNIPIIIWLMETYPRSSPCVYVAPTRDMIIKRPHPHVNPSGI 422
            VNLLQ DGTIPM +Q VTYNIPII+WLME+YPR  PCVYV PTRDMIIKRPHPHVNPSG+
Sbjct: 72   VNLLQADGTIPMPFQGVTYNIPIIMWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGL 131

Query: 423  VSIPYLHNWVYPSSNLVDMVRNLSHLFGREPPLYT-RQSQSQSRPNDN--------SLAT 575
            VS+PYL NW+YPSSNLVD+VR L  +FGR+PPLY+ R+ QS   PN N        +L+T
Sbjct: 132  VSVPYLQNWIYPSSNLVDLVRELGGVFGRDPPLYSQRRPQSNPNPNPNPSYVSNPANLST 191

Query: 576  -TNSSGL-EVGVSNLGNSRPTSI----PPRAYXXXXXXXXXXXXXXXXXXQRQNTDDPNE 737
             +NSSG   VG S      P ++    PP  Y                      T+D  E
Sbjct: 192  LSNSSGFGSVGPSGYPRPPPPTMARPYPPSPYGGSGGGG--------------GTEDAAE 237

Query: 738  VYRKNAINKLVDSLHGDITTLRKNREVEMEGLISAQTVLRQREEVLAKGLREMVGEKEGL 917
            VY++NAINK+V+S+HGD+  LRK RE EMEGL SAQ VLR+REE + KGL+EM  EKEGL
Sbjct: 238  VYKRNAINKIVESVHGDVLQLRKAREAEMEGLFSAQAVLRRREEEINKGLKEMQDEKEGL 297

Query: 918  EQQLQMVLMNTDILEGWLRDNEGKMGMKTG-NVDTDEAFVPCDALSKQMLESTASDLAIE 1094
            E QLQ+VLMNTD+LE W+R+NEGK+  K   +VD D  F   DALSKQMLE T++DLAIE
Sbjct: 298  EAQLQVVLMNTDVLEAWVRENEGKVKAKGHVDVDVDNVFECTDALSKQMLECTSADLAIE 357

Query: 1095 DAIYSLDKAAQEGSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQTQVVSMAARAPQY 1274
            D +YSLDKA QEG +P DQYL+N+R LSREQFF RATAAKVRA QMQ QV SMAAR   Y
Sbjct: 358  DVVYSLDKAVQEGVVPFDQYLRNVRLLSREQFFQRATAAKVRATQMQAQVASMAARLSHY 417

Query: 1275 A 1277
            A
Sbjct: 418  A 418


>ref|XP_003607267.1| Protein ELC [Medicago truncatula] gi|355508322|gb|AES89464.1| Protein
            ELC [Medicago truncatula]
          Length = 411

 Score =  492 bits (1267), Expect = e-136
 Identities = 253/410 (61%), Positives = 304/410 (74%), Gaps = 4/410 (0%)
 Frame = +3

Query: 57   PPPNPQFTSQFLSNVLCQRGPSSLPYTEDAKWLIRQHLVSLTETHPSLQPKTATYNHNDG 236
            PPPNP+ T QFLS++L QRGPS+LPY+ED KWLIRQHL+SL  T PSL+PKTATY HNDG
Sbjct: 4    PPPNPE-TQQFLSSILSQRGPSALPYSEDTKWLIRQHLLSLLTTFPSLEPKTATYTHNDG 62

Query: 237  TTVNLLQVDGTIPMVYQSVTYNIPIIIWLMETYPRSSPCVYVAPTRDMIIKRPHPHVNPS 416
              VNLLQ DGTIPM YQSVTYNIPI+IWLME+YPR  P VYV PTRDMIIK  HPHVNPS
Sbjct: 63   RAVNLLQADGTIPMTYQSVTYNIPIVIWLMESYPRHPPRVYVNPTRDMIIKHAHPHVNPS 122

Query: 417  GIVSIPYLHNWVYPSSNLVDMVRNLSHLFGREPPLYT-RQSQSQSRPNDNSLATTNSSGL 593
            G+VS+P+LHNW+YPSSNLVD+V  LS +FGR+PPLY+ R+      P+ N     N +  
Sbjct: 123  GLVSVPHLHNWIYPSSNLVDLVLALSLIFGRDPPLYSQRRPNPNPNPHQNHNHNPNPNPN 182

Query: 594  EVGVSNLGNSRPT--SIPPRAYXXXXXXXXXXXXXXXXXXQRQNTDDPNEVYRKNAINKL 767
                SN G + P+  S P R                    +  +T+DP EV+R+NAINKL
Sbjct: 183  TNQSSNFGTNPPSGYSHPGRINSNININSYPPSPYSPAPSRPTHTEDPTEVFRRNAINKL 242

Query: 768  VDSLHGDITTLRKNREVEMEGLISAQTVLRQREEVLAKGLREMVGEKEGLEQQLQMVLMN 947
            V+ +H D+T LRK RE EMEGL   Q VL+QREEVL  G++EM  E EGLEQQLQMVLMN
Sbjct: 243  VEMVHNDVTALRKTREGEMEGLFGLQGVLKQREEVLNNGVKEMPDEMEGLEQQLQMVLMN 302

Query: 948  TDILEGWLRDNEGKMGMKTGNVD-TDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAA 1124
            TD+LEGWLR+N+GK   K G+V+  +EAF   D LSKQML+ T++DLAIED +Y+LDK  
Sbjct: 303  TDVLEGWLRENQGK---KLGSVENAEEAFECVDVLSKQMLDCTSADLAIEDTLYALDKGV 359

Query: 1125 QEGSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQTQVVSMAARAPQY 1274
            Q GS+P DQYL+++R+LSREQFFHRATAAKVRAAQ+Q QV +MAAR   Y
Sbjct: 360  QVGSVPFDQYLRSVRALSREQFFHRATAAKVRAAQLQAQVANMAARNHHY 409


>gb|ABK96512.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 403

 Score =  491 bits (1265), Expect = e-136
 Identities = 249/409 (60%), Positives = 303/409 (74%), Gaps = 2/409 (0%)
 Frame = +3

Query: 57   PPPNPQFTSQFLSNVLCQRGPSSLPYTEDAKWLIRQHLVSLTETHPSLQPKTATYNHNDG 236
            PPPN Q   QFLS+VL QRGPS+LPYTED KWLIRQHLVSLT T PSL+PKTAT+ HNDG
Sbjct: 4    PPPNHQAIQQFLSSVLSQRGPSALPYTEDTKWLIRQHLVSLTSTFPSLEPKTATFTHNDG 63

Query: 237  TTVNLLQVDGTIPMVYQSVTYNIPIIIWLMETYPRSSPCVYVAPTRDMIIKRPHPHVNPS 416
             TVNLLQ DGT+PM ++SVTYNIP+IIWL+E+YPR  PCVYV PTRDM+IKR H  VNPS
Sbjct: 64   RTVNLLQADGTVPMTFESVTYNIPVIIWLIESYPRHPPCVYVNPTRDMVIKRSHSFVNPS 123

Query: 417  GIVSIPYLHNWVYPSSNLVDMVRNLSHLFGREPPLYTRQSQSQSRP--NDNSLATTNSSG 590
            G+V++PYL NW+YPSSNLVD+ R LS +FGR+PPL++++ +    P  + N  + TNSS 
Sbjct: 124  GLVAVPYLQNWIYPSSNLVDLARELSMIFGRDPPLFSQRPRPSPNPSYHPNQSSLTNSS- 182

Query: 591  LEVGVSNLGNSRPTSIPPRAYXXXXXXXXXXXXXXXXXXQRQNTDDPNEVYRKNAINKLV 770
               G    G  R    PP+                     +  T+D  EV+++N INKLV
Sbjct: 183  -TFGSVGSGYPRQMVRPPQ--------YPPPSPPYGGGEGKAGTEDAAEVFKRNVINKLV 233

Query: 771  DSLHGDITTLRKNREVEMEGLISAQTVLRQREEVLAKGLREMVGEKEGLEQQLQMVLMNT 950
            +++HGD+  LRK RE EME L SAQ VLR+REE + KGL+EM  E EGLE QLQ+VLMNT
Sbjct: 234  ENVHGDMLLLRKTRESEMENLFSAQAVLRRREEEINKGLKEMRDEMEGLESQLQVVLMNT 293

Query: 951  DILEGWLRDNEGKMGMKTGNVDTDEAFVPCDALSKQMLESTASDLAIEDAIYSLDKAAQE 1130
            D+LE W+R NEGK+     ++D D+AF   D LSKQMLE TA+D+AIED +YSLDKA QE
Sbjct: 294  DVLEAWVRQNEGKVKGGMEDIDVDKAFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQE 353

Query: 1131 GSIPVDQYLKNIRSLSREQFFHRATAAKVRAAQMQTQVVSMAARAPQYA 1277
            G++P  QYL+N+R LSREQFF+RATAAKVRAAQMQ QV SMAARAP+YA
Sbjct: 354  GAMPFVQYLRNVRLLSREQFFNRATAAKVRAAQMQAQVASMAARAPRYA 402


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