BLASTX nr result

ID: Coptis25_contig00006009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006009
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517815.1| conserved hypothetical protein [Ricinus comm...   518   e-144
ref|XP_002278058.1| PREDICTED: uncharacterized protein LOC100243...   493   e-137
gb|ABK96472.1| unknown [Populus trichocarpa x Populus deltoides]      488   e-135
ref|XP_004135937.1| PREDICTED: uncharacterized protein LOC101208...   478   e-132
ref|XP_002882566.1| hypothetical protein ARALYDRAFT_478142 [Arab...   466   e-129

>ref|XP_002517815.1| conserved hypothetical protein [Ricinus communis]
            gi|223543087|gb|EEF44622.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 377

 Score =  518 bits (1333), Expect = e-144
 Identities = 264/379 (69%), Positives = 299/379 (78%), Gaps = 4/379 (1%)
 Frame = -2

Query: 1196 MATLSYNPSKLRNHKPQPHKP----ASLSKPIKVFYPSSHFSTFSPSKFSHLRLNSISES 1029
            MATLS+NP+++      PHKP     S SKP KV++P S      P K    +L+  S+ 
Sbjct: 1    MATLSFNPTRI------PHKPISKITSFSKPTKVYFPVSQ----KPPKTHQKQLHFQSKL 50

Query: 1028 SVSLPTDQASTPSAIENSFNEDEVDDDPTSEVKYFDPEMDPESILEWEIDFCSRPILDIR 849
            SVS  T +       +N   E+EVDDDPT+EV Y DPE DP+SI+EWE+DFCSRPILDIR
Sbjct: 51   SVS--TQEQVEVEDYDNEEEEEEVDDDPTAEVSYLDPETDPDSIVEWELDFCSRPILDIR 108

Query: 848  GKKIWELVVCDGSLSLQFTKYFPNNVINSITLKDALVSISDELGVPLPEKIRFFRSQMQT 669
            GKK+WELVVCD SLSLQFTKYFPNNVINSITLKDALVS+S++LGVPLPEKIRFFRSQMQT
Sbjct: 109  GKKVWELVVCDDSLSLQFTKYFPNNVINSITLKDALVSVSEDLGVPLPEKIRFFRSQMQT 168

Query: 668  IITKACKELSIKPVPSKRCLSLLLWLEERYETVYIRHPGFQQGSKPLLALDNPFPMDLPE 489
            IITKACKEL+IKPVPSKRCLSLLLWLEERYETVY RHPGFQ+GSKPLLALDNPFPM+LPE
Sbjct: 169  IITKACKELNIKPVPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPMELPE 228

Query: 488  NLIGEKWAFVQLPFSAVQEEVSSLEKNFAFXXXXXXXXXXXXXXDQTLIPGIAVASSRAQ 309
            NL GEKWAFVQLPFSAVQEEVSSLE  F F              ++TLIPG+AVASSRA+
Sbjct: 229  NLFGEKWAFVQLPFSAVQEEVSSLETRFMFGASLDLDLLGIEIGEKTLIPGLAVASSRAK 288

Query: 308  PLAAWMNGLEVCSVEADLTKASLILSVGISTRYVYATYKKSVTTTQXXXXXXXXXXACGG 129
            PLAAWMNGLEVCS+EAD ++A LILSVG+STRY+YATYKK+  TT            CGG
Sbjct: 289  PLAAWMNGLEVCSIEADTSRACLILSVGLSTRYIYATYKKNPVTTAEAEAWEAAKKTCGG 348

Query: 128  LHFLAIQENLDSDDCVGFW 72
            LHFLAIQE+LDS+DCVGFW
Sbjct: 349  LHFLAIQEDLDSEDCVGFW 367


>ref|XP_002278058.1| PREDICTED: uncharacterized protein LOC100243060 [Vitis vinifera]
          Length = 378

 Score =  493 bits (1269), Expect = e-137
 Identities = 255/381 (66%), Positives = 287/381 (75%), Gaps = 6/381 (1%)
 Frame = -2

Query: 1196 MATLSYNPSKLRNHKPQPHKPA----SLSKPIK--VFYPSSHFSTFSPSKFSHLRLNSIS 1035
            MA LS NP+K+     Q HKP     SL+ P K  + +P++   T    K  H R +S+S
Sbjct: 1    MAGLSLNPTKITTPTLQSHKPIYRFNSLTNPTKTQLKFPTNPAKTHP--KLLHFRHSSVS 58

Query: 1034 ESSVSLPTDQASTPSAIENSFNEDEVDDDPTSEVKYFDPEMDPESILEWEIDFCSRPILD 855
            ESSVS+P +              D+ +DDPTSE+ Y D E DPESI EWE+DFCSRPILD
Sbjct: 59   ESSVSVPKE-----------VEVDDEEDDPTSEMNYLDRETDPESISEWELDFCSRPILD 107

Query: 854  IRGKKIWELVVCDGSLSLQFTKYFPNNVINSITLKDALVSISDELGVPLPEKIRFFRSQM 675
            IRGKKIWEL+VCD SLSLQ+TKYFPNNVINS+TLK+A+ SISDEL VPLPEKIRFFRSQM
Sbjct: 108  IRGKKIWELLVCDSSLSLQYTKYFPNNVINSVTLKNAIESISDELDVPLPEKIRFFRSQM 167

Query: 674  QTIITKACKELSIKPVPSKRCLSLLLWLEERYETVYIRHPGFQQGSKPLLALDNPFPMDL 495
            QTI+TKACKEL IKP+PSKRCLSL+LWLEERYETVY RHPGFQQGSKPLL LDNPFPM L
Sbjct: 168  QTIVTKACKELGIKPIPSKRCLSLILWLEERYETVYTRHPGFQQGSKPLLTLDNPFPMQL 227

Query: 494  PENLIGEKWAFVQLPFSAVQEEVSSLEKNFAFXXXXXXXXXXXXXXDQTLIPGIAVASSR 315
            PENL GEKWAFVQLPFSAVQEEVSSLE    F                TLIPG+AVASSR
Sbjct: 228  PENLFGEKWAFVQLPFSAVQEEVSSLETRLVFGASLDLDLLGIEVDANTLIPGLAVASSR 287

Query: 314  AQPLAAWMNGLEVCSVEADLTKASLILSVGISTRYVYATYKKSVTTTQXXXXXXXXXXAC 135
            A+PLAAWMNGLEVCS+EAD  +A LILSVGISTRY+YATYKK+  TT           AC
Sbjct: 288  AKPLAAWMNGLEVCSIEADTARACLILSVGISTRYIYATYKKTPVTTSEAEAWEAAKKAC 347

Query: 134  GGLHFLAIQENLDSDDCVGFW 72
            GGLHFLAIQ++L+SDDCVGFW
Sbjct: 348  GGLHFLAIQDDLNSDDCVGFW 368


>gb|ABK96472.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 376

 Score =  488 bits (1256), Expect = e-135
 Identities = 249/379 (65%), Positives = 293/379 (77%), Gaps = 4/379 (1%)
 Frame = -2

Query: 1196 MATLSYNPSKLRNHKPQPHKP----ASLSKPIKVFYPSSHFSTFSPSKFSHLRLNSISES 1029
            MATLS+NP+++      PHKP    AS SK  ++ +P S   +    K  HL+ N I++ 
Sbjct: 1    MATLSFNPTRI------PHKPISKTASFSKTSEMPFPFSLKPSKHHVKPLHLQSNIITKL 54

Query: 1028 SVSLPTDQASTPSAIENSFNEDEVDDDPTSEVKYFDPEMDPESILEWEIDFCSRPILDIR 849
            SVS   ++  T         ED  +DDPT+E  Y D E DP+SILEWE+DFCSRPILD+R
Sbjct: 55   SVSTQEEEVETEK-------EDLEEDDPTAETVYLDQETDPDSILEWELDFCSRPILDVR 107

Query: 848  GKKIWELVVCDGSLSLQFTKYFPNNVINSITLKDALVSISDELGVPLPEKIRFFRSQMQT 669
            GKK+WELVVCD SLSLQFTKYFPNNVINSITLKDA+VSIS +LGVPLPE+IRFFRSQMQT
Sbjct: 108  GKKVWELVVCDDSLSLQFTKYFPNNVINSITLKDAIVSISVDLGVPLPERIRFFRSQMQT 167

Query: 668  IITKACKELSIKPVPSKRCLSLLLWLEERYETVYIRHPGFQQGSKPLLALDNPFPMDLPE 489
            IITKACKE+ IKP+PSKRC+SLLLWLEERYETVY RHPGFQ+G+KPLLALDNPFPM+LP+
Sbjct: 168  IITKACKEIGIKPIPSKRCISLLLWLEERYETVYTRHPGFQKGAKPLLALDNPFPMELPD 227

Query: 488  NLIGEKWAFVQLPFSAVQEEVSSLEKNFAFXXXXXXXXXXXXXXDQTLIPGIAVASSRAQ 309
            NL GEKWAFVQLPFSAV+EE++S E +F F              D+T+IPG+AVASSRA+
Sbjct: 228  NLFGEKWAFVQLPFSAVREEIASFETSFFFGASLDLDLLGIEIDDKTMIPGLAVASSRAE 287

Query: 308  PLAAWMNGLEVCSVEADLTKASLILSVGISTRYVYATYKKSVTTTQXXXXXXXXXXACGG 129
            PLAAWMNGLEVC++EAD ++A LILSVGI+TRYVYATYKK+  TT           ACGG
Sbjct: 288  PLAAWMNGLEVCAIEADTSRACLILSVGIATRYVYATYKKTPVTTAEAEAWEAAKKACGG 347

Query: 128  LHFLAIQENLDSDDCVGFW 72
            LHFLAIQ +LDSDDCVGFW
Sbjct: 348  LHFLAIQNDLDSDDCVGFW 366


>ref|XP_004135937.1| PREDICTED: uncharacterized protein LOC101208052 [Cucumis sativus]
            gi|449488836|ref|XP_004158187.1| PREDICTED:
            uncharacterized protein LOC101230638 [Cucumis sativus]
          Length = 379

 Score =  478 bits (1231), Expect = e-132
 Identities = 251/382 (65%), Positives = 290/382 (75%), Gaps = 7/382 (1%)
 Frame = -2

Query: 1196 MATLSYNPSKLRN------HKPQP-HKPASLSKPIKVFYPSSHFSTFSPSKFSHLRLNSI 1038
            MATLS+NP+++R        K +P + P S S  IK     S     S       R NS+
Sbjct: 1    MATLSFNPTRIRTLGGLHFTKSKPIYSPFSQS--IKTANRFSANGRISQQPLPRFRSNSV 58

Query: 1037 SESSVSLPTDQASTPSAIENSFNEDEVDDDPTSEVKYFDPEMDPESILEWEIDFCSRPIL 858
            SESSV+ P          E   NEDE  DDPT E+ Y D E DPESI EWE+DFCSRPIL
Sbjct: 59   SESSVTAPE---------EVELNEDE--DDPTLEMAYLDSETDPESITEWELDFCSRPIL 107

Query: 857  DIRGKKIWELVVCDGSLSLQFTKYFPNNVINSITLKDALVSISDELGVPLPEKIRFFRSQ 678
            DIRGKK+WELVVCD SLSLQ+TKYFPNNVINSITL+DA+ SI++ELGVPLP+KIRFFRSQ
Sbjct: 108  DIRGKKVWELVVCDNSLSLQYTKYFPNNVINSITLRDAVSSIAEELGVPLPDKIRFFRSQ 167

Query: 677  MQTIITKACKELSIKPVPSKRCLSLLLWLEERYETVYIRHPGFQQGSKPLLALDNPFPMD 498
            MQTIITKAC EL IKP+PSKRCLSLLLWLEERYETVY RHPGFQ+GSKPLLALDNPFPM+
Sbjct: 168  MQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALDNPFPME 227

Query: 497  LPENLIGEKWAFVQLPFSAVQEEVSSLEKNFAFXXXXXXXXXXXXXXDQTLIPGIAVASS 318
            LPENL GE+WAFVQLPFSAVQEE+S+L++ F F              D+T+IPG++VA+S
Sbjct: 228  LPENLFGERWAFVQLPFSAVQEEISNLKETFMFGSSLDLDLLGIEIDDKTMIPGLSVATS 287

Query: 317  RAQPLAAWMNGLEVCSVEADLTKASLILSVGISTRYVYATYKKSVTTTQXXXXXXXXXXA 138
            RAQPLAAWMNG+EV SVEAD ++ASLILSVGI+TRYVYATYKK+  T+           A
Sbjct: 288  RAQPLAAWMNGMEVYSVEADTSRASLILSVGIATRYVYATYKKTPVTSAEAEAWEAAKKA 347

Query: 137  CGGLHFLAIQENLDSDDCVGFW 72
            CGGLHFLAIQ++LDS+DCVGFW
Sbjct: 348  CGGLHFLAIQDDLDSEDCVGFW 369


>ref|XP_002882566.1| hypothetical protein ARALYDRAFT_478142 [Arabidopsis lyrata subsp.
            lyrata] gi|297328406|gb|EFH58825.1| hypothetical protein
            ARALYDRAFT_478142 [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score =  466 bits (1198), Expect = e-129
 Identities = 240/376 (63%), Positives = 284/376 (75%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1196 MATLSYNPSKLRNHK-PQPHKPASLSKPIKVFYPSSHFSTFSPSKFSHLRLNSISESSVS 1020
            MATL +N ++++    P+  KP+S +KPIK  +  S  +     +F      S+ ESS+S
Sbjct: 1    MATLGFNTTRIQTPSLPRIPKPSSFTKPIKTHHLFSSETLLKRCRFVS---RSLPESSLS 57

Query: 1019 LPTDQASTPSAIENSFNEDEVDDDPTSEVKYFDPEMDPESILEWEIDFCSRPILDIRGKK 840
            +  +Q           NE E +DDPTSE+ Y DPE D +SI EWE+DFCSRPILD RGKK
Sbjct: 58   ITKEQEVA--------NEVE-EDDPTSELSYLDPESDADSIKEWELDFCSRPILDSRGKK 108

Query: 839  IWELVVCDGSLSLQFTKYFPNNVINSITLKDALVSISDELGVPLPEKIRFFRSQMQTIIT 660
            IWELVVCD SLSLQ TKYFPNNVINSITLKDA+V+I+ +LGVPLPEKIRFFRSQMQTIIT
Sbjct: 109  IWELVVCDASLSLQVTKYFPNNVINSITLKDAIVTITQDLGVPLPEKIRFFRSQMQTIIT 168

Query: 659  KACKELSIKPVPSKRCLSLLLWLEERYETVYIRHPGFQQGSKPLLALDNPFPMDLPENLI 480
            KACKEL+IK VPSKRCLSL LWL+ERY+TVY RHPGFQ+GS PLL+LDNPFPM+LPENL 
Sbjct: 169  KACKELAIKAVPSKRCLSLFLWLQERYDTVYTRHPGFQKGSLPLLSLDNPFPMNLPENLF 228

Query: 479  GEKWAFVQLPFSAVQEEVSSLEKNFAFXXXXXXXXXXXXXXDQTLIPGIAVASSRAQPLA 300
            GEKWAFVQLP+SAV+EE+S  E+ F F              + TLIPG++VA+SRA+PLA
Sbjct: 229  GEKWAFVQLPYSAVREEISDFEEKFVFGATLDLDLLGIEVDENTLIPGLSVATSRAKPLA 288

Query: 299  AWMNGLEVCSVEADLTKASLILSVGISTRYVYATYKKSVTTTQXXXXXXXXXXACGGLHF 120
            AWMNGLEVCS+EAD +K  LILSVGI+TRYVYATYKK+  TT           A GGLHF
Sbjct: 289  AWMNGLEVCSIEADSSKGCLILSVGIATRYVYATYKKTPVTTDEAEAWESAKKASGGLHF 348

Query: 119  LAIQENLDSDDCVGFW 72
            LAIQ++LDSDDCVGFW
Sbjct: 349  LAIQDDLDSDDCVGFW 364


Top