BLASTX nr result

ID: Coptis25_contig00006005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00006005
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46793.1| unknown [Lotus japonicus]                              188   1e-45
ref|XP_002307596.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_003610781.1| Non-specific lipid-transfer protein [Medicag...   184   2e-44
ref|XP_002517108.1| Nonspecific lipid-transfer protein A precurs...   181   2e-43
ref|XP_002282896.2| PREDICTED: non-specific lipid-transfer prote...   179   5e-43

>gb|AFK46793.1| unknown [Lotus japonicus]
          Length = 169

 Score =  188 bits (478), Expect = 1e-45
 Identities = 101/171 (59%), Positives = 116/171 (67%), Gaps = 3/171 (1%)
 Frame = -2

Query: 682 MALKDMNMTIFMVCVTMLLAGASAQSSCTNVLISLSPCLNYITGNSSTPSPSCCQQLAMV 503
           MA + MNM + +V + ML AG +AQSSC NVL+SLSPCLNYITGNSSTPS  CC QLA V
Sbjct: 1   MAHRKMNMGLILVVMAMLCAGVAAQSSCANVLVSLSPCLNYITGNSSTPSSGCCSQLAAV 60

Query: 502 VGSQPQCLCQVXXXXXXXXGININQTQALALPSACNVQTPPVSRCNAAASPTNSPAGTAE 323
           V SQPQCLCQV        GININQTQALALP AC VQTPP S+CN AA+P NSP   A 
Sbjct: 61  VRSQPQCLCQVLGGGASSLGININQTQALALPGACKVQTPPTSQCNTAATPANSPEEPAA 120

Query: 322 SPSASTQSGNGSKNVPSVGGG---GRSIQMPFSCLLFVHLVASHASTFSNF 179
               S  SG GSK+ P+ G G   G SI++    LL   L A++ASTF  +
Sbjct: 121 ESPNSGPSGTGSKSTPTTGDGSSSGNSIKLSIPLLLV--LAATYASTFRTY 169


>ref|XP_002307596.1| predicted protein [Populus trichocarpa] gi|222857045|gb|EEE94592.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  185 bits (469), Expect = 1e-44
 Identities = 100/167 (59%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
 Frame = -2

Query: 682 MALKDMNMTIFMVCVTMLLAGASAQSSCTNVLISLSPCLNYITGNSSTPSPSCCQQLAMV 503
           MA++ M + + +  +  L AGA AQSSCTNV+IS+SPCLNYITGNSSTPS SCC QLA V
Sbjct: 1   MAVRRMEVMLTISFIATLWAGAMAQSSCTNVIISMSPCLNYITGNSSTPSSSCCTQLANV 60

Query: 502 VGSQPQCLCQVXXXXXXXXGININQTQALALPSACNVQTPPVSRCNAAASPTNSPAGTAE 323
           V SQPQCLC+V        G+N+NQTQALALPSACNVQTP +SRCN A+SPT+SPAGT  
Sbjct: 61  VKSQPQCLCEVVNGGASSLGVNVNQTQALALPSACNVQTPSISRCN-ASSPTDSPAGTPN 119

Query: 322 SPSASTQSGNGSKNVPSVGGG---GRSIQMPFSCLLFVHLVASHAST 191
           SPSA    G GSK VPS   G     S ++  S L F+  + S AST
Sbjct: 120 SPSA----GTGSKTVPSTDNGTSDANSTKLTMSLLFFLLFITSQAST 162


>ref|XP_003610781.1| Non-specific lipid-transfer protein [Medicago truncatula]
           gi|355512116|gb|AES93739.1| Non-specific lipid-transfer
           protein [Medicago truncatula]
          Length = 168

 Score =  184 bits (468), Expect = 2e-44
 Identities = 105/171 (61%), Positives = 120/171 (70%), Gaps = 6/171 (3%)
 Frame = -2

Query: 682 MALKDMNMTIFMVCVTMLLAGASAQSSCTNVLISLSPCLNYITGNSSTPSPSCCQQLAMV 503
           MA   MNM + +V + M+ AGA+AQSSCTNVL+SLSPCLNYITGNSSTPS  CC  LA V
Sbjct: 1   MAHSKMNMNLVLVVIAMMCAGATAQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSNLASV 60

Query: 502 VGSQPQCLCQVXXXXXXXXGININQTQALALPSACNVQTPPVSRCNA--AASPTNSPAGT 329
           V SQP CLCQV        GI+INQTQALALP AC VQTPP S+C    AASP +SPAGT
Sbjct: 61  VSSQPLCLCQVLGGGASSLGISINQTQALALPGACKVQTPPTSQCKTTNAASPADSPAGT 120

Query: 328 -AESPSASTQSGNGSKNVPSVGGG---GRSIQMPFSCLLFVHLVASHASTF 188
            AESP+ S  SG GSK+ PS G G   G SI +  S  LF+ L A++AS F
Sbjct: 121 EAESPN-SVPSGTGSKSTPSTGDGSSSGNSINL--SIPLFLILAAAYASVF 168


>ref|XP_002517108.1| Nonspecific lipid-transfer protein A precursor, putative [Ricinus
           communis] gi|223543743|gb|EEF45271.1| Nonspecific
           lipid-transfer protein A precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  181 bits (459), Expect = 2e-43
 Identities = 100/165 (60%), Positives = 113/165 (68%), Gaps = 4/165 (2%)
 Frame = -2

Query: 682 MALKDMNMTIFMVCVTMLLAGASAQSSCTNVLISLSPCLNYITGNSSTPSPSCCQQLAMV 503
           MA +D+ M++ +  V+ML AGA AQS CTNVLIS+SPCLNYITGNSSTPS  CC QL+ V
Sbjct: 1   MAHRDLAMSLALAVVSMLYAGAVAQSGCTNVLISMSPCLNYITGNSSTPSSQCCSQLSSV 60

Query: 502 VGSQPQCLCQVXXXXXXXXGININQTQALALPSACNVQTPPVSRCNAAASPTNSPAGTAE 323
           V S PQCLCQV        GININQTQALALP ACNVQTPP+S CN AASP  SPAGT E
Sbjct: 61  VRSSPQCLCQVLSGGGSSLGININQTQALALPGACNVQTPPISSCN-AASPAASPAGTPE 119

Query: 322 SPSASTQSGNGSKNVPSV----GGGGRSIQMPFSCLLFVHLVASH 200
            P  +T SG GSK VPS        G SI++    L F+   A H
Sbjct: 120 IP--NTPSGTGSKTVPSTEVDGTSDGSSIKLSIPLLAFLLFAAFH 162


>ref|XP_002282896.2| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
          Length = 171

 Score =  179 bits (455), Expect = 5e-43
 Identities = 99/169 (58%), Positives = 117/169 (69%), Gaps = 4/169 (2%)
 Frame = -2

Query: 682 MALKDMNMTIFMVCVTMLLAGASAQSSCTNVLISLSPCLNYITGNSSTPSPSCCQQLAMV 503
           MA   + + + +V VTML  G +AQSSCT+V+IS+SPCLNYI+GNSSTPS  CC QLA V
Sbjct: 1   MARTALAVGLVLVAVTMLWPGTAAQSSCTSVIISMSPCLNYISGNSSTPSSGCCTQLASV 60

Query: 502 VGSQPQCLCQVXXXXXXXXGININQTQALALPSACNVQTPPVSRCNA-AASPTNSPAGTA 326
           V SQPQCLC+V        GININQTQALALP ACNVQTPP+SRCN  AASP +SPA   
Sbjct: 61  VRSQPQCLCEVLNGGGSSVGININQTQALALPGACNVQTPPLSRCNGNAASPADSPAAMP 120

Query: 325 ESPSASTQSGNGSKNVPSVGGG---GRSIQMPFSCLLFVHLVASHASTF 188
           ESP+ +  S  GSK VPS   G   G S +   S L  + + AS+ASTF
Sbjct: 121 ESPT-TVPSDGGSKTVPSTDNGTSNGSSTKSSMSLLFILLIAASYASTF 168


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