BLASTX nr result
ID: Coptis25_contig00006001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00006001
(1914 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513636.1| conserved hypothetical protein [Ricinus comm... 595 e-167
ref|XP_002274346.1| PREDICTED: uncharacterized protein LOC100242... 575 e-161
ref|XP_002327502.1| predicted protein [Populus trichocarpa] gi|2... 559 e-156
ref|XP_003533974.1| PREDICTED: uncharacterized protein LOC100809... 558 e-156
ref|XP_002866505.1| hypothetical protein ARALYDRAFT_496448 [Arab... 554 e-155
>ref|XP_002513636.1| conserved hypothetical protein [Ricinus communis]
gi|223547544|gb|EEF49039.1| conserved hypothetical
protein [Ricinus communis]
Length = 544
Score = 595 bits (1533), Expect = e-167
Identities = 318/516 (61%), Positives = 391/516 (75%), Gaps = 21/516 (4%)
Frame = -1
Query: 1812 LSTTTICKPLLFSDAT----------SSNSLSINPE---LKGMSTR--SAAFPSSMKIAG 1678
LS IC P F+D++ S++ S++P+ +KG+S+ S+ FPS+++IAG
Sbjct: 42 LSPPKICIPFQFADSSYRPLTRSSFESTHPDSVSPKSAAVKGLSSAESSSGFPSTVRIAG 101
Query: 1677 LHSNANGG-PAFVGQVFSMCDISGTGLMSVSSHFDIPFLSKRTPEWMKNMFSVFTKSASN 1501
L+SN GG PAFVGQVFSMCD+SGTGLM+VS+HFDIPF+SKRTPEW+K +F+ TKS
Sbjct: 102 LNSNGKGGGPAFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKVFTTVTKSERK 161
Query: 1500 GPVFRFFMDLGDAVSYVKRLNIPTGVVGACRLDLAYEHFKEKPHMFKFVPNEKQVKAANK 1321
GPVFRFFMDLGDAV+YVKRLNIP+GVVGACRLDLAYEHFKEKPH+F+FVPNEKQVKAAN+
Sbjct: 162 GPVFRFFMDLGDAVTYVKRLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANQ 221
Query: 1320 ILKKIPHS-GKRRVDGVPVFTAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHF 1144
+LK IP S G+R+VDGVPVF+AQNLDIAIATTDGIKWYTPYFFDK+MLDNILEESVDQHF
Sbjct: 222 LLKTIPQSDGRRKVDGVPVFSAQNLDIAIATTDGIKWYTPYFFDKSMLDNILEESVDQHF 281
Query: 1143 NSLIQTRHMQRRRDVVDDNLTSEVVEDNGDSLFEPPEVQEVLDEMGYPGVPLSVISKAAE 964
++LIQTRHMQRRRDV+DDNL +EV+E+ GDS+ EPPEVQE++DE+G+P +PL+VISKAAE
Sbjct: 282 HALIQTRHMQRRRDVIDDNLAAEVIEEMGDSMLEPPEVQEMMDEIGHPAIPLNVISKAAE 341
Query: 963 VQLLYAVDKVLLGNRWLRKATGIQPKFPYMVDSFEKRSAASFMKAAELTNTAGCKEVGYD 784
+QLLYAVD+V+LGNRWLRKATGIQPKFPYMVDSFEKRSA+SF +A+E +
Sbjct: 342 IQLLYAVDRVILGNRWLRKATGIQPKFPYMVDSFEKRSASSFRRASEPASYLA------- 394
Query: 783 KDEYVNDSAERRLQGSTQGGQKQQIQNDDFRLPFGDWLANLQSFQQKSDTQIEADTSLTD 604
K + D+++ L+ G Q D RL FGDW +L QQ+ E + +++
Sbjct: 395 KSKTDADTSKLNLE---DGAQANHEPITDLRLQFGDWFKSLGLKQQQKP---EKGSEISE 448
Query: 603 ARDDYINQQLPLSPLLPKITMVGISTGEAGQMSKANLKKTMEDLTKELE----QXXXXXX 436
R Q+L ++P LPKITMVGISTGEAGQMSKA+LKKTMEDLT+ELE +
Sbjct: 449 CR----KQKLEMNPFLPKITMVGISTGEAGQMSKASLKKTMEDLTRELEHTDRENAPGSS 504
Query: 435 XXXXXXXXXXRDPLFVANVGI*YFMIGRLVLPSTLR 328
RDPLFVANVG Y + + P +R
Sbjct: 505 NNGNDLEMEDRDPLFVANVGDYYSGMSKTNSPRLVR 540
>ref|XP_002274346.1| PREDICTED: uncharacterized protein LOC100242331 [Vitis vinifera]
Length = 556
Score = 575 bits (1481), Expect = e-161
Identities = 317/530 (59%), Positives = 384/530 (72%), Gaps = 22/530 (4%)
Frame = -1
Query: 1899 PSKKKSMSLSSTDSPLIKIASANFFP------PFCL-STTTICKPLLF---------SDA 1768
P K ST S L+ + + P P C + + IC PL F S++
Sbjct: 15 PLKAAHQFFCSTASNLLSLLPSKTTPFSPKPAPVCFPNPSKICVPLFFASPAPQLPSSES 74
Query: 1767 TSSNSLSINPELKGMSTRS-AAFPSSMKIAGLHSNANGG-PAFVGQVFSMCDISGTGLMS 1594
SNS S KG S S +AFP ++I GL+++A GG PAFVGQVFSMCD+SG G+M+
Sbjct: 75 AQSNSASAT---KGESPESGSAFPKDVRIGGLNTSAKGGGPAFVGQVFSMCDVSGNGIMA 131
Query: 1593 VSSHFDIPFLSKRTPEWMKNMFSVFTKSASNGPVFRFFMDLGDAVSYVKRLNIPTGVVGA 1414
VS+HFDIPF+SKR P+ +K MF+ TKS NGPVFRFFMDLGDAV YVK+LNIP+G VGA
Sbjct: 132 VSNHFDIPFISKRMPQRIKKMFATITKSDKNGPVFRFFMDLGDAVRYVKKLNIPSGGVGA 191
Query: 1413 CRLDLAYEHFKEKPHMFKFVPNEKQVKAANKILKKIPHSG-KRRVDGVPVFTAQNLDIAI 1237
CRLDLAY HF EKPH+F+FVPNEKQVKAANK+LKKIP +G ++R+DGVPVFTAQNLDIAI
Sbjct: 192 CRLDLAYGHFMEKPHLFRFVPNEKQVKAANKLLKKIPQNGGRKRIDGVPVFTAQNLDIAI 251
Query: 1236 ATTDGIKWYTPYFFDKNMLDNILEESVDQHFNSLIQTRHMQRRRDVVDDNLTSEVVEDNG 1057
ATTDGIKWYTPYFFDK+ LD+ILE+S+D HF+ LIQ+RH+QRRRDV+DDNL +EV+EDN
Sbjct: 252 ATTDGIKWYTPYFFDKHTLDSILEQSIDHHFHHLIQSRHVQRRRDVIDDNLAAEVLEDNA 311
Query: 1056 DSLFEPPEVQEVLDEMGYPGVPLSVISKAAEVQLLYAVDKVLLGNRWLRKATGIQPKFPY 877
+SL+EPPEVQEVLDE+G+PG+PLSVISKAAE+QLLYAVD+VLLGNRWLRKATGIQPKFPY
Sbjct: 312 ESLWEPPEVQEVLDEVGHPGIPLSVISKAAEMQLLYAVDRVLLGNRWLRKATGIQPKFPY 371
Query: 876 MVDSFEKRSAASFMKAAELTNTAGCKEVGYD-KDEYVNDSAERRLQGSTQGGQKQQIQND 700
MVDSFEKRSAASF +A+ E+G D KD ++ +L+ +T Q+ Q QN
Sbjct: 372 MVDSFEKRSAASFRRASPSKRFVASPEMGNDNKDTEELGPSDPKLEDNT---QRDQGQNS 428
Query: 699 DFRLPFGDWLANLQSFQQKSDTQIEADTSLTDARDDYINQQLPLSPLLPKITMVGISTGE 520
P D L N ++ + Q ++ + DA ++I Q+L L+P LPKITMVGIS GE
Sbjct: 429 ASWFPVWD-LFNHPWSNKRQEPQNRSNARIEDASREHIKQELQLAPFLPKITMVGISAGE 487
Query: 519 AGQMSKANLKKTMEDLTKELEQ--XXXXXXXXXXXXXXXXRDPLFVANVG 376
+G MSK NLKKTMEDLTKELEQ RDPLFVANVG
Sbjct: 488 SG-MSKVNLKKTMEDLTKELEQADQENAVGCINSEFEVENRDPLFVANVG 536
>ref|XP_002327502.1| predicted protein [Populus trichocarpa] gi|222836056|gb|EEE74477.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 559 bits (1440), Expect = e-156
Identities = 282/422 (66%), Positives = 338/422 (80%), Gaps = 5/422 (1%)
Frame = -1
Query: 1626 MCDISGTGLMSVSSHFDIPFLSKRTPEWMKNMFSVFTKSASNGPVFRFFMDLGDAVSYVK 1447
MCD+SGTGLM+VS+HFD+PF+SKRTPEW+K +F+ TKS NGPVFRFFMDLGDAV+YVK
Sbjct: 1 MCDLSGTGLMAVSTHFDVPFISKRTPEWLKKIFATVTKSERNGPVFRFFMDLGDAVAYVK 60
Query: 1446 RLNIPTGVVGACRLDLAYEHFKEKPHMFKFVPNEKQVKAANKILKKIPHS-GKRRVDGVP 1270
RLNIP+GVVGACRLDLAYEHFKEKPH+F+FVPNEKQVKAAN++LK IPH G RRVDGVP
Sbjct: 61 RLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANQLLKSIPHGDGSRRVDGVP 120
Query: 1269 VFTAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHFNSLIQTRHMQRRRDVVDD 1090
VF+AQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHF++LIQTRHMQRRRDV+DD
Sbjct: 121 VFSAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHFHALIQTRHMQRRRDVIDD 180
Query: 1089 NLTSEVVEDNGDSLFEPPEVQEVLDEMGYPGVPLSVISKAAEVQLLYAVDKVLLGNRWLR 910
N+ +EV+E+ GDSL EPPEVQEVLDEMG+P +PLSVISKAAE+QLLYAVDKVLLGNRWLR
Sbjct: 181 NVAAEVIEEMGDSLLEPPEVQEVLDEMGHPAIPLSVISKAAEIQLLYAVDKVLLGNRWLR 240
Query: 909 KATGIQPKFPYMVDSFEKRSAASFMKAAELTNTAGCKEVGYDKDEYVNDSAERRLQGSTQ 730
KATGIQPKFPY+VDSFE+RSA+S +A E T+ ++ + ++E +L+ + Q
Sbjct: 241 KATGIQPKFPYLVDSFERRSASSLRRALESTSCLANSKID-------DSTSEHKLKDNVQ 293
Query: 729 GGQKQQIQNDDFRLPFGDWLANLQSFQQKSDTQIEADTSLTDARDDYINQQLPLSPLLPK 550
+Q+ D RLPFGDW ++ ++ S ++ E+DT D + + +P LPK
Sbjct: 294 TDHEQR---KDLRLPFGDWFSH-PWLKKHSKSERESDTRKEGLSKDCLKWKSESNPFLPK 349
Query: 549 ITMVGISTGEAGQMSKANLKKTMEDLTKELEQ----XXXXXXXXXXXXXXXXRDPLFVAN 382
+TMVG+STG+AGQ+SK++LKKTMEDLTKELEQ RDPLFVAN
Sbjct: 350 VTMVGVSTGDAGQLSKSSLKKTMEDLTKELEQTDEANDSFISNSSSEFKVNDRDPLFVAN 409
Query: 381 VG 376
VG
Sbjct: 410 VG 411
>ref|XP_003533974.1| PREDICTED: uncharacterized protein LOC100809082 [Glycine max]
Length = 532
Score = 558 bits (1437), Expect = e-156
Identities = 303/497 (60%), Positives = 366/497 (73%), Gaps = 6/497 (1%)
Frame = -1
Query: 1824 PPFCLSTTTICKPLLFSDATSSNSLSINPELKGMSTRSAAFPSSMKIAGLHSNANGG--P 1651
PP S P L S +T+ +S + P R AA S++IA L +N GG P
Sbjct: 44 PPSSFSLPLFFAPPL-SSSTAVDSATAEP------ARPAA--KSVRIARLGANGKGGGGP 94
Query: 1650 AFVGQVFSMCDISGTGLMSVSSHFDIPFLSKRTPEWMKNMFSVFTKSASNGPVFRFFMDL 1471
FVGQVFSMCD+SGTGLM+VS+HFDIPF+SKRTPEW+K +F+ TKS NGPVFRFF+DL
Sbjct: 95 VFVGQVFSMCDLSGTGLMAVSTHFDIPFISKRTPEWLKKVFAAITKSERNGPVFRFFIDL 154
Query: 1470 GDAVSYVKRLNIPTGVVGACRLDLAYEHFKEKPHMFKFVPNEKQVKAANKILKKIP-HSG 1294
GDAVSYVK+LNIP+GVVGACRLDLAYEHFKEKPH+F+FVPNEKQVKAANK+LK I H
Sbjct: 155 GDAVSYVKKLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNEKQVKAANKLLKTISEHGE 214
Query: 1293 KRRVDGVPVFTAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHFNSLIQTRHMQ 1114
K++VDGVPVF+AQNLDIAIATTDGIKWYTPYFFDKNMLDNILEE+VDQHF++LIQTRHM
Sbjct: 215 KKKVDGVPVFSAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEEAVDQHFHTLIQTRHMH 274
Query: 1113 RRRDVVDDNLTSEVVEDNGDSLFEPPEVQEVLDEMGYPGVPLSVISKAAEVQLLYAVDKV 934
RRRDVVDDNL +EV+E+ GDSL EPPEVQE+LDEMG+P +PLSVISKAAE+Q Y VDKV
Sbjct: 275 RRRDVVDDNLAAEVIEEMGDSLGEPPEVQELLDEMGHPSIPLSVISKAAELQFQYTVDKV 334
Query: 933 LLGNRWLRKATGIQPKFPYMVDSFEKRSAASFMKAAELTNTAGCKEVGYD-KDEYVNDSA 757
LGNRWLRKATGIQP FPYMVDSFE+RS AS ++A E +++ +V D K+ DS+
Sbjct: 335 FLGNRWLRKATGIQPIFPYMVDSFERRSEASLLRATESSSSLENSKVEDDRKNAECIDSS 394
Query: 756 ERRLQGSTQGGQKQQIQNDDFRLPFGDWLANLQSFQQKSDTQIEADTSLTDARDDYINQQ 577
+ L G+T+ ++ + LPFG+W +L Q + + +R ++
Sbjct: 395 KCSLDGNTEAIKQ---SSPRLSLPFGNWFHHLWPKQCRK--------KVGSSRKGVNKEE 443
Query: 576 LPLSPLLPKITMVGISTGEAGQMSKANLKKTMEDLTKELE--QXXXXXXXXXXXXXXXXR 403
+ +P LPKITMVG+ST EAGQMSKANLKKTM+DLT+ELE + R
Sbjct: 444 MKPAPFLPKITMVGLSTEEAGQMSKANLKKTMDDLTRELEKTELDIMTDGGSKECKVEDR 503
Query: 402 DPLFVANVGI*YFMIGR 352
DPLFVANVG Y +G+
Sbjct: 504 DPLFVANVGDYYSSLGK 520
>ref|XP_002866505.1| hypothetical protein ARALYDRAFT_496448 [Arabidopsis lyrata subsp.
lyrata] gi|297312340|gb|EFH42764.1| hypothetical protein
ARALYDRAFT_496448 [Arabidopsis lyrata subsp. lyrata]
Length = 525
Score = 554 bits (1428), Expect = e-155
Identities = 294/490 (60%), Positives = 370/490 (75%), Gaps = 6/490 (1%)
Frame = -1
Query: 1827 FPPFCLSTTTICKPLLFSDATSSNSLSINPELKGMSTRSAAFPSSMKIAGLHSNAN-GGP 1651
FPP + + +C PL FS + +S + ST S+ S+++I+ L S+ GGP
Sbjct: 28 FPPKT-APSRVCLPLRFSVSDDVSSPFESTVKSSSSTSSSGLNSTVRISSLSSDGKRGGP 86
Query: 1650 AFVGQVFSMCDISGTGLMSVSSHFDIPFLSKRTPEWMKNMFSVFTKSASNGPVFRFFMDL 1471
AFVGQVFSMCD++GTGLM+VS+HFDIPF+SKRTPEW+K MFS TKS NGPVFRFFMDL
Sbjct: 87 AFVGQVFSMCDLTGTGLMAVSTHFDIPFISKRTPEWLKKMFSTITKSERNGPVFRFFMDL 146
Query: 1470 GDAVSYVKRLNIPTGVVGACRLDLAYEHFKEKPHMFKFVPNEKQVKAANKILKKIPHSG- 1294
GDAVSYVK+LNIP+GVVGACRLDLAYEHFKEKPH+F+FVPNE+QVKAANK+LK +P +G
Sbjct: 147 GDAVSYVKKLNIPSGVVGACRLDLAYEHFKEKPHLFQFVPNERQVKAANKLLKSMPQNGR 206
Query: 1293 KRRVDGVPVFTAQNLDIAIATTDGIKWYTPYFFDKNMLDNILEESVDQHFNSLIQTRHMQ 1114
K++V+GVPVF AQNLDIA+AT DGIKWYTPYFFDK +LDNILEESVDQHF++LIQTRH+Q
Sbjct: 207 KQKVEGVPVFGAQNLDIAVATADGIKWYTPYFFDKAVLDNILEESVDQHFHTLIQTRHVQ 266
Query: 1113 RRRDVVDDNLTSEVVEDNGDSLFEPPEVQEVLDEMGYPGVPLSVISKAAEVQLLYAVDKV 934
RRRDVVDD+L SEV+E+ GDS+ EPPEVQE ++E+G G+PLSV++KAAE+QLLYAVD+V
Sbjct: 267 RRRDVVDDSLASEVMEEMGDSMLEPPEVQEAMEEIGSSGIPLSVVAKAAEIQLLYAVDRV 326
Query: 933 LLGNRWLRKATGIQPKFPYMVDSFEKRSAASFMKAA-ELTNTAGCKEVGYDKDEYVNDSA 757
LLG+RW RKATGIQPK PY+VDSFE+RSA S +A+ T G D E ++
Sbjct: 327 LLGSRWFRKATGIQPKLPYLVDSFERRSAFSIQRASGSATRCLG------DSVEADTSAS 380
Query: 756 ERRLQGSTQGGQKQQIQNDDFRLPFGDWLANLQSFQQKSDTQIEADTSLTDARDDYINQQ 577
R++ ++ +++ QN F PFGDW+ + +S ++ + + +D ++R+ ++
Sbjct: 381 LLRVEDNSPSEDEKRQQNLWF--PFGDWINHSESKKEHTHHKGPSDGRDMESRE----RE 434
Query: 576 LPLSPLLPKITMVGISTGEAGQMSKANLKKTMEDLTKELEQ---XXXXXXXXXXXXXXXX 406
+ SP LPKITMVGISTGEA QMSKANLKKTMEDLT++LEQ
Sbjct: 435 MLRSPFLPKITMVGISTGEAAQMSKANLKKTMEDLTEDLEQSDEGNDHGSKRYDPRKMEE 494
Query: 405 RDPLFVANVG 376
RDPLFVANVG
Sbjct: 495 RDPLFVANVG 504