BLASTX nr result

ID: Coptis25_contig00005995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005995
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...    94   2e-17
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    92   6e-17
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...    78   7e-13
ref|XP_002439959.1| hypothetical protein SORBIDRAFT_09g023410 [S...    64   2e-08

>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/87 (51%), Positives = 61/87 (70%)
 Frame = +2

Query: 2    FKHIVEQLMLSNVVLRFPEVITLSSDIGEASLTFRQLSDITKTYRIGRALHTDVAEGDLV 181
            +K+ +E+L LS   + FPEV+ +SSDIG+ASLT   L+ I  +YR  + L  DV   DL 
Sbjct: 1398 YKYAIEKLKLSKAYVHFPEVMEISSDIGQASLTLDHLAAIISSYRQCKVLCPDVTAQDLD 1457

Query: 182  TFEQMKLNLVELHQKWQTIFTWHDGPL 262
              E++KL+L +L+QKWQTIFTW DGPL
Sbjct: 1458 ALEEIKLDLSQLYQKWQTIFTWQDGPL 1484


>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/87 (52%), Positives = 57/87 (65%)
 Frame = +2

Query: 2    FKHIVEQLMLSNVVLRFPEVITLSSDIGEASLTFRQLSDITKTYRIGRALHTDVAEGDLV 181
            FK ++EQLM+    + FP  I++SSDIG AS T  QL  I  +Y+ G     DV   DL 
Sbjct: 1412 FKFLIEQLMMLKAFVDFPGDISISSDIGHASQTLDQLDVIVNSYQQGITPWADVTRQDLD 1471

Query: 182  TFEQMKLNLVELHQKWQTIFTWHDGPL 262
            TF +MKL+L +LHQKWQTIF W DGPL
Sbjct: 1472 TFVRMKLDLAQLHQKWQTIFMWQDGPL 1498


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/87 (49%), Positives = 56/87 (64%)
 Frame = +2

Query: 2    FKHIVEQLMLSNVVLRFPEVITLSSDIGEASLTFRQLSDITKTYRIGRALHTDVAEGDLV 181
            FK+I+E+ MLS     F + + LSSDIG+AS T   L+ I  +YR G+    +V+  D+ 
Sbjct: 1391 FKYIIEKWMLSKAYTHFAQDLDLSSDIGQASSTLDHLNLIITSYRQGQVSCPNVSAKDID 1450

Query: 182  TFEQMKLNLVELHQKWQTIFTWHDGPL 262
            T EQMK +L  L QKWQTIF W DGPL
Sbjct: 1451 TLEQMKWDLTCLLQKWQTIFMWQDGPL 1477


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/87 (43%), Positives = 54/87 (62%)
 Frame = +2

Query: 2    FKHIVEQLMLSNVVLRFPEVITLSSDIGEASLTFRQLSDITKTYRIGRALHTDVAEGDLV 181
            ++ I+EQL        +PE   +SS + +ASLT   L+ + + Y+ GR    DV + +L 
Sbjct: 946  YEEIIEQLKRLKAFRCYPEDHLISSGVDQASLTIDLLNSMIRKYKEGRVCTADVIKEELY 1005

Query: 182  TFEQMKLNLVELHQKWQTIFTWHDGPL 262
             FEQ+KLNL  LH+KWQ+IF W DGPL
Sbjct: 1006 AFEQLKLNLDVLHRKWQSIFEWQDGPL 1032


>ref|XP_002439959.1| hypothetical protein SORBIDRAFT_09g023410 [Sorghum bicolor]
            gi|241945244|gb|EES18389.1| hypothetical protein
            SORBIDRAFT_09g023410 [Sorghum bicolor]
          Length = 1126

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/87 (35%), Positives = 48/87 (55%)
 Frame = +2

Query: 2    FKHIVEQLMLSNVVLRFPEVITLSSDIGEASLTFRQLSDITKTYRIGRALHTDVAEGDLV 181
            FK +V ++    + +     + L +D+  A      L++I   YR  + L  DV+  DL 
Sbjct: 1002 FKDLVVKIKGMKMFVDVAGNVPLETDVSGADSVISHLNEILDRYRKEKYLFPDVSAQDLA 1061

Query: 182  TFEQMKLNLVELHQKWQTIFTWHDGPL 262
              EQ+KL+L+ LH++WQ IF W DGPL
Sbjct: 1062 AMEQIKLDLMHLHRRWQAIFLWQDGPL 1088


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