BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005988
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...    91   1e-16
ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...    90   2e-16
ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228...    89   3e-16
ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta...    89   3e-16

>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
           gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
           thaliana] gi|21553945|gb|AAM63026.1| unknown
           [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1|
           At3g56740 [Arabidopsis thaliana]
           gi|110735889|dbj|BAE99920.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1|
           Ubiquitin-associated (UBA) protein [Arabidopsis
           thaliana]
          Length = 293

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/58 (72%), Positives = 47/58 (81%)
 Frame = -1

Query: 176 SALLTILIGVRGSSCKLGLSYQDIFRRLRIWRLFASVFAFSSTPALMFGLYLLYYFRV 3
           SAL T+  G++G S KLGLSYQDIF + RIW+L  S FAFSSTP LMFGLYLLYYFRV
Sbjct: 21  SALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAFSSTPELMFGLYLLYYFRV 78


>ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/59 (69%), Positives = 50/59 (84%)
 Frame = -1

Query: 179 ASALLTILIGVRGSSCKLGLSYQDIFRRLRIWRLFASVFAFSSTPALMFGLYLLYYFRV 3
           ASA+ ++ +G++G S KLGLSYQDIFR  R+W+L  SVFAFSSTP +MFGLYLLYYFRV
Sbjct: 20  ASAIFSVFLGIKGGSNKLGLSYQDIFRNPRLWKLVLSVFAFSSTPEMMFGLYLLYYFRV 78


>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/59 (69%), Positives = 49/59 (83%)
 Frame = -1

Query: 179 ASALLTILIGVRGSSCKLGLSYQDIFRRLRIWRLFASVFAFSSTPALMFGLYLLYYFRV 3
           A AL TI  G++G   KLGLSYQD+F++L++W+L  SVFAFSSTP LMFGLYLLYYFRV
Sbjct: 20  ACALFTIFFGIQGRPNKLGLSYQDVFKKLQLWKLIVSVFAFSSTPELMFGLYLLYYFRV 78


>ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus]
          Length = 291

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = -1

Query: 179 ASALLTILIGVRGSSCKLGLSYQDIFRRLRIWRLFASVFAFSSTPALMFGLYLLYYFRV 3
           ASAL TI  G++G S KLGLSYQD+  +LR+W+L  SVFAFSSTP LMFGL+LLYYFRV
Sbjct: 20  ASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAFSSTPELMFGLFLLYYFRV 78


>ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like
           [Cucumis sativus]
          Length = 291

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = -1

Query: 179 ASALLTILIGVRGSSCKLGLSYQDIFRRLRIWRLFASVFAFSSTPALMFGLYLLYYFRV 3
           ASAL TI  G++G S KLGLSYQD+  +LR+W+L  SVFAFSSTP LMFGL+LLYYFRV
Sbjct: 20  ASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAFSSTPELMFGLFLLYYFRV 78