BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00005975
         (1824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   223   1e-55
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   171   8e-40
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   169   2e-39
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   162   4e-37
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-35

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  223 bits (568), Expect = 1e-55
 Identities = 134/376 (35%), Positives = 192/376 (51%), Gaps = 7/376 (1%)
 Frame = +2

Query: 338  FSGLHEDILRLIAEKIDLIVDFIRVGAVCKSWRSVTLDKRHFSLFLKPLPWLMLTANDGE 517
            +S + +D L+LIAEK+  + D++R G VCKSW S+  DK       K  PWLML   +  
Sbjct: 922  WSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PWLMLAEKENS 980

Query: 518  EIRSFFSPFENKIYRLNLPKASGCHCWGSPFGWVVTVAFDHKVHMLNXXXXXXXXXXXXX 697
            EIR F+SP   K+Y + LP+  G  CWGSP+GW+VT+  D  + +LN             
Sbjct: 981  EIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLR 1040

Query: 698  XFND--RYFDAKSPGKNRMSYITXXXXXXXXXXXIAEEQFLVLIIYGGCNSLAFARPGDE 871
               +     D+ + G                    +     V+IIY     LAF +PG +
Sbjct: 1041 ACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP---SSPDCAVMIIYSDYGRLAFTKPGHQ 1097

Query: 872  TWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLPSSQSTIFARPPPNVKGVDRF 1051
            TWT +   +  V D +YFNG F AVN    V +CD  G  S   TI     P ++ VD  
Sbjct: 1098 TWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISG--SQLKTIRFAAAPALQDVDEI 1155

Query: 1052 -----YILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYKCDFCTRKWEKLQNLG 1216
                 Y++E  GE+++V R L + T    I +   ++T    V K D C ++WE+++NL 
Sbjct: 1156 EYEAKYLVESGGEIYMVTRNL-YDTARRDIPY---MRTWTFSVLKLDMCNKRWEEVENLD 1211

Query: 1217 DHAIFIGSNNSFSLKASDYPGCKPSCIYFTDDHNEASGRLVGHDMGIFNMDTVEIERLYE 1396
              + F+G+N+SFS  ASDYP  + + IYFTDD+          DMGI+N    +IE    
Sbjct: 1212 HCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNTQIEHYPV 1271

Query: 1397 GHDSLSRYSPPVWITP 1444
            GHD+LS +S P+WI P
Sbjct: 1272 GHDALSMFSAPLWIRP 1287


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  171 bits (432), Expect = 8e-40
 Identities = 125/394 (31%), Positives = 184/394 (46%), Gaps = 24/394 (6%)
 Frame = +2

Query: 338  FSGLHEDILRLIAEKIDLIVDFIRVGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLTANDG 514
            +S LH ++L  IA+K  +  D++R  AVC +WR SV     H       LPWLML  +  
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT---QLPWLMLPQSQP 60

Query: 515  EEI-RSFFSPFENKIYRLNLPKASGCHCW-GSPFGWVVTVAFDHKVHMLNXXXXXXXXXX 688
                R FFS   NK + L LP+AS      GS  GW++ +    ++ +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 689  XXXXFND-----------RYFDAKSPG--------KNRMSYITXXXXXXXXXXXIAEEQF 811
                F +            Y    S G        K R S+I                 F
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG---SDF 177

Query: 812  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 991
            + ++I      LA  R  D++WT +        D ++  G FYAVN +G + +CD  G  
Sbjct: 178  IAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 992  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYK 1171
               S I     P   G D  Y++E   EL LV R LD   D+   +   + +T   +V +
Sbjct: 238  PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCR 294

Query: 1172 CDFCTRKWEKLQNLGDHAIFIGSNNSFSLKASDYPGCKPSCIYFTDDHNEASGRLVG--H 1345
             D    +WE + +LGD A+F+G N S SL + D+PGCK +CIY+TDD++E +   +G   
Sbjct: 295  LDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 1346 DMGIFNMDTVEIERLYEGHDSLSRYSPPVWITPH 1447
            D+GIFN++   IE L   H  + R+ PP+W+TP+
Sbjct: 355  DLGIFNLEDGSIEPLPCSHFRI-RWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  169 bits (428), Expect = 2e-39
 Identities = 125/394 (31%), Positives = 184/394 (46%), Gaps = 24/394 (6%)
 Frame = +2

Query: 338  FSGLHEDILRLIAEKIDLIVDFIRVGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLTANDG 514
            +S LH ++L  IA+K  +  D++R  AVC +WR SV     H       LPWLML  +  
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT---QLPWLMLPQSQP 60

Query: 515  EEI-RSFFSPFENKIYRLNLPKASGCHCW-GSPFGWVVTVAFDHKVHMLNXXXXXXXXXX 688
                R FFS   NK + L LP+AS      GS  GW++ +    ++ +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 689  XXXXFND-----------RYFDAKSPG--------KNRMSYITXXXXXXXXXXXIAEEQF 811
                F +            Y    S G        K R S+I                 F
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG---SDF 177

Query: 812  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 991
            + ++I      LA  R  D++WT +        D ++  G FYAVN +G + +CD  G  
Sbjct: 178  IAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 992  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYK 1171
               S I     P   G D  Y++E   EL LV R LD   D+   +   + +T   +V +
Sbjct: 238  PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCR 294

Query: 1172 CDFCTRKWEKLQNLGDHAIFIGSNNSFSLKASDYPGCKPSCIYFTDDHNEASGRLVG--H 1345
             D    +WE + +LGD A+F+G N S SL + D+PGCK +CIY+TDD++E +   +G   
Sbjct: 295  LDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 1346 DMGIFNMDTVEIERLYEGHDSLSRYSPPVWITPH 1447
            D+GIFN++   IE L   H  + R+ PP+W+TP+
Sbjct: 355  DLGIFNLEDGSIEPLPCSHFRI-RWPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  162 bits (409), Expect = 4e-37
 Identities = 117/399 (29%), Positives = 191/399 (47%), Gaps = 29/399 (7%)
 Frame = +2

Query: 338  FSGLHEDILRLIAEKIDLIVDFIRVGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLT---A 505
            +S L  +++ +I++ + +  D++   AVC +WR S+     H       LPWLML    +
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLP---PQLPWLMLPQSQS 61

Query: 506  NDGEEIRSFFSPFENKIYRLNLPKAS--GCHCWGSPFGWVVTVAFDHKVHMLNXXXXXXX 679
               +  R+FFS   NK + LNLP+ S    HC GS  GW++ +     + ++N       
Sbjct: 62   QSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHC-GSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 680  XXXXXXXF-NDRYFDAKSPGKN---------------RMSYITXXXXXXXXXXXIAEEQF 811
                   F N   F+    G+                R    +           + +  F
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLKDNNF 180

Query: 812  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 991
            +V+ I    + LA+ R GD++W+ +        D ++ NG FYAVN  G + +CD   + 
Sbjct: 181  VVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICD---IS 237

Query: 992  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLD--FGTDMPAIEFQHLLKTKLIEV 1165
            S    +     P   G D  Y++    EL LV R LD  +  D P +E   + +T   EV
Sbjct: 238  SDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEV 297

Query: 1166 YKCDFCTRKWEKLQNLGDHAIFIGSNNSFSLKASDYPGCKPSCIYFTDDHNEAS--GRLV 1339
            ++ D+   +W ++  LGD A+FIG N+S SL A+D+ GC  +CIY+TDD+ +A+  G   
Sbjct: 298  FRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFG 357

Query: 1340 GHDMGIFNM--DTVEIERLY-EGHDSLSRYSPPVWITPH 1447
             HD+GIF +  +T+E    Y     S  ++SPP+W++P+
Sbjct: 358  DHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  155 bits (392), Expect = 3e-35
 Identities = 117/395 (29%), Positives = 180/395 (45%), Gaps = 28/395 (7%)
 Frame = +2

Query: 347  LHEDILRLIAEKIDLIVDFIRVGAVCKSWRS-VTLDKRHFSLFLKPLPWLMLTANDGEE- 520
            L  +++ +I++KI +  D++   AVC +W+S +     H       LPWL+L  +   + 
Sbjct: 8    LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLP---PQLPWLLLPQSQSNQS 64

Query: 521  -IRSFFSPFENKIYRLNLPKASGC--HCWGSPFGWVVTVAFDHKVHMLNXXXXXXXXXXX 691
              R+FF+    K + LNLP+AS    HC GS  GW++ +     + ++N           
Sbjct: 65   SYRAFFNLSTYKFHSLNLPEASHRKKHC-GSSHGWLIILDDSPSILVINPLTRRKIHLPA 123

Query: 692  XXXF-NDRYFDAKSPGKNRMSYITXXXXXXXXXXXIAE-----------------EQFLV 817
               F N   FD  + G+  +               + +                 + F+ 
Sbjct: 124  ISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVA 183

Query: 818  LIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLPSS 997
            + I      LA+ + GDE W  +        D +YFNG FYAVN  G + +CD  G  +S
Sbjct: 184  MAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG--NS 241

Query: 998  QSTIFARPPPNVKGVDRFYILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYKCD 1177
                F   P  + G D  Y++     L LV R LD   +        + KT   EV+K D
Sbjct: 242  PKVSFIETPRQIGG-DMQYLVSSGDGLLLVTRYLDLDVEFDIF----IYKTARFEVFKLD 296

Query: 1178 FCTRKWEKLQNLGDHAIFIGSNNSFSLKASDYPGCKPSCIYFTDDH--NEASGRLVGHDM 1351
                +WE++ +LGD  +FIG N+S +L AS   GC   CIY+TDD+  N   G +  HD+
Sbjct: 297  LNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDL 356

Query: 1352 GIFNMDTVEIERL-YEGHDSLSR--YSPPVWITPH 1447
            GIF +    IE L     +S SR  + PP+WI+P+
Sbjct: 357  GIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391